ID	geneLength	allCountsMulti	filteredCountsMulti	dupRateMulti	dupsPerIdMulti	RPKMulti	RPKMMulti	allCounts	filteredCounts	dupRate	dupsPerId	RPK	RPKM
YAL069W	315	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL068W-A	255	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL068C	363	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL067W-A	228	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL067C	1782	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL066W	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL065C	387	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064W-B	381	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064C-A	381	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL064W	285	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL063C-A	291	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL063C	3969	1	1	0	0	0.251952632905014	122.010960244559	0	0	NA	0	0	0
YAL062W	1374	1	1	0	0	0.727802037845706	352.446507431335	1	1	0	0	0.727802037845706	352.446507431335
YAL061W	1254	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL060W	1149	12	11	0.0833333333333333	1	10.443864229765	5057.56137034625	10	9	0.1	1	8.70322019147084	4214.63447528854
YAL059C-A	423	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL059W	639	3	3	0	0	4.69483568075117	2273.5281746979	3	3	0	0	4.69483568075117	2273.5281746979
YAL058W	1509	4	4	0	0	2.65076209410205	1283.66203104216	4	4	0	0	2.65076209410205	1283.66203104216
YAL056C-A	351	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL056W	2643	7	7	0	0	2.64850548618994	1282.56924270699	7	7	0	0	2.64850548618994	1282.56924270699
YAL055W	543	1	1	0	0	1.84162062615101	891.825969080394	1	1	0	0	1.84162062615101	891.825969080394
YAL054C	2142	2	2	0	0	0.933706816059757	452.158264435718	2	2	0	0	0.933706816059757	452.158264435718
YAL053W	2352	21	20	0.0476190476190476	1	8.92857142857143	4323.76340366655	21	20	0.0476190476190476	1	8.92857142857143	4323.76340366655
YAL051W	3144	7	7	0	0	2.2264631043257	1078.1903652909	7	7	0	0	2.2264631043257	1078.1903652909
YAL049C	741	4	4	0	0	5.39811066126856	2614.09717252715	4	4	0	0	5.39811066126856	2614.09717252715
YAL048C	1989	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL047W-A	330	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL047C	1869	1	1	0	0	0.535045478865704	259.101926811479	1	1	0	0	0.535045478865704	259.101926811479
YAL046C	357	1	1	0	0	2.80112044817927	1356.47479330715	1	1	0	0	2.80112044817927	1356.47479330715
YAL045C	309	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL044W-A	333	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL044C	513	12	12	0	0	23.3918128654971	11327.7544142843	12	12	0	0	23.3918128654971	11327.7544142843
YAL043C	2358	3	3	0	0	1.27226463104326	616.108780166226	3	3	0	0	1.27226463104326	616.108780166226
YAL042C-A	378	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL042W	1248	14	14	0	0	11.2179487179487	5432.42068665798	14	14	0	0	11.2179487179487	5432.42068665798
YAL041W	2565	7	7	0	0	2.72904483430799	1321.57134833317	7	7	0	0	2.72904483430799	1321.57134833317
YAL040C	1743	4	4	0	0	2.29489386115892	1111.32874632393	4	4	0	0	2.29489386115892	1111.32874632393
YAL039C	810	2	2	0	0	2.46913580246914	1195.70741039668	2	2	0	0	2.46913580246914	1195.70741039668
YAL038W	1503	386	142	0.632124352331606	244	256.819693945442	124367.890530481	386	142	0.632124352331606	244	256.819693945442	124367.890530481
YAL037C-B	975	1	1	0	0	1.02564102564103	496.678462780158	1	1	0	0	1.02564102564103	496.678462780158
YAL037C-A	93	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL037W	804	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL036C	1110	2	2	0	0	1.8018018018018	872.543245424601	2	2	0	0	1.8018018018018	872.543245424601
YAL035W	3009	44	43	0.0227272727272727	1	14.6227982718511	7081.25824302717	44	43	0.0227272727272727	1	14.6227982718511	7081.25824302717
YAL034C-B	354	3	3	0	0	8.47457627118644	4103.91102720893	3	3	0	0	8.47457627118644	4103.91102720893
YAL034W-A	870	1	1	0	0	1.14942528735632	556.622415184659	1	1	0	0	1.14942528735632	556.622415184659
YAL034C	1242	2	2	0	0	1.61030595813205	779.809180693484	2	2	0	0	1.61030595813205	779.809180693484
YAL033W	522	2	2	0	0	3.83141762452107	1855.40805061553	2	2	0	0	3.83141762452107	1855.40805061553
YAL032C	1140	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL031W-A	309	1	1	0	0	3.23624595469256	1567.18932430632	1	1	0	0	3.23624595469256	1567.18932430632
YAL031C	2283	7	7	0	0	3.06614104248795	1484.81406415882	7	7	0	0	3.06614104248795	1484.81406415882
YAL030W	354	6	6	0	0	16.9491525423729	8207.82205441786	6	6	0	0	16.9491525423729	8207.82205441786
YAL029C	4416	21	19	0.0952380952380952	2	4.7554347826087	2302.87398673545	21	19	0.0952380952380952	2	4.7554347826087	2302.87398673545
YAL028W	1587	2	2	0	0	1.26023944549464	610.285445760118	2	2	0	0	1.26023944549464	610.285445760118
YAL027W	786	1	1	0	0	1.27226463104326	616.108780166226	1	1	0	0	1.27226463104326	616.108780166226
YAL026C-A	438	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL026C	4068	10	10	0	0	2.45821042281219	1190.41666964271	10	10	0	0	2.45821042281219	1190.41666964271
HRA1	564	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL025C	921	1	1	0	0	1.085776330076	525.7996755816	1	1	0	0	1.085776330076	525.7996755816
YAL024C	4308	4	3	0.25	1	0.928505106778087	449.639276890115	4	3	0.25	1	0.928505106778087	449.639276890115
YAL023C	2280	41	38	0.0731707317073171	3	17.9824561403509	8708.21120598105	41	38	0.0731707317073171	3	17.9824561403509	8708.21120598105
YAL022C	1554	8	7	0.125	1	5.14800514800515	2492.98070121315	8	7	0.125	1	5.14800514800515	2492.98070121315
YAL021C	2514	7	7	0	0	2.78440731901352	1348.38126828742	7	7	0	0	2.78440731901352	1348.38126828742
YAL020C	1002	1	1	0	0	0.998003992015968	483.294911387878	1	1	0	0	0.998003992015968	483.294911387878
YAL019W-A	570	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL019W	3396	14	13	0.0714285714285714	1	4.12249705535925	1996.36661276477	14	13	0.0714285714285714	1	4.12249705535925	1996.36661276477
YAL018C	978	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL017W	4071	15	14	0.0666666666666667	1	3.68459837877671	1784.30914226475	15	14	0.0666666666666667	1	3.68459837877671	1784.30914226475
YAL016C-B	186	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL016C-A	315	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL016W	1908	16	16	0	0	8.38574423480084	4060.89309191324	16	16	0	0	8.38574423480084	4060.89309191324
YAL015C	1200	2	2	0	0	1.66666666666667	807.102502017756	2	2	0	0	1.66666666666667	807.102502017756
YAL014C	768	2	2	0	0	2.60416666666667	1261.09765940274	2	2	0	0	2.60416666666667	1261.09765940274
YAL013W	1218	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL012W	1185	11	11	0	0	9.28270042194093	4495.25444161788	11	11	0	0	9.28270042194093	4495.25444161788
YAL011W	1878	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL010C	1482	5	5	0	0	3.37381916329285	1633.81073282947	5	5	0	0	3.37381916329285	1633.81073282947
YAL009W	780	3	3	0	0	3.84615384615385	1862.54423542559	3	3	0	0	3.84615384615385	1862.54423542559
YAL008W	597	2	2	0	0	3.3500837520938	1622.31658697036	2	2	0	0	3.3500837520938	1622.31658697036
YAL007C	648	11	10	0.0909090909090909	1	16.9753086419753	8220.48844647715	11	10	0.0909090909090909	1	16.9753086419753	8220.48844647715
tP(UGG)A	72	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL005C	1929	153	109	0.287581699346405	44	79.3157076205288	38409.5436419026	153	109	0.287581699346405	44	79.3157076205288	38409.5436419026
YAL004W	648	0	0	NA	0	0	0	0	0	NA	0	0	0
YAL003W	621	117	76	0.35042735042735	41	188.405797101449	91237.6741411377	117	76	0.35042735042735	41	188.405797101449	91237.6741411377
snR18	102	3	3	0	0	29.4117647058824	14242.9853297251	3	3	0	0	29.4117647058824	14242.9853297251
YAL002W	3825	5	5	0	0	1.30718954248366	633.021570210005	5	5	0	0	1.30718954248366	633.021570210005
YAL001C	3483	6	6	0	0	1.72265288544358	834.214472369774	6	6	0	0	1.72265288544358	834.214472369774
YAR002W	1620	4	4	0	0	2.46913580246914	1195.70741039668	4	4	0	0	2.46913580246914	1195.70741039668
YAR002C-A	660	21	15	0.285714285714286	6	31.8181818181818	15408.3204930663	21	15	0.285714285714286	6	31.8181818181818	15408.3204930663
YAR003W	1281	5	5	0	0	3.9032006245121	1890.16979395259	5	5	0	0	3.9032006245121	1890.16979395259
YAR007C	1866	7	7	0	0	3.7513397642015	1816.62942576344	6	6	0	0	3.21543408360129	1557.11093636866
YAR008W	828	3	3	0	0	3.6231884057971	1754.57065656034	3	3	0	0	3.6231884057971	1754.57065656034
YAR009C	3591	99	80	0.191919191919192	19	27.5689223057644	13350.5677025494	99	80	0.191919191919192	19	27.5689223057644	13350.5677025494
YAR010C	1323	9	9	0	0	6.80272108843537	3294.29592660309	9	9	0	0	6.80272108843537	3294.29592660309
tA(UGC)A	73	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR014C	2130	7	7	0	0	3.28638497652582	1591.46972228853	7	7	0	0	3.28638497652582	1591.46972228853
YAR015W	921	14	14	0	0	15.2008686210641	7361.1954581424	14	14	0	0	15.2008686210641	7361.1954581424
YAR018C	1308	6	6	0	0	4.58715596330275	2221.38303307639	6	6	0	0	4.58715596330275	2221.38303307639
YAR019C	2925	1	1	0	0	0.341880341880342	165.559487593386	1	1	0	0	0.341880341880342	165.559487593386
YAR019W-A	333	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR020C	168	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR023C	540	0	0	NA	0	0	0	0	0	NA	0	0	0
tL(CAA)A	82	0	0	NA	0	0	0	0	0	NA	0	0	0
tS(AGA)A	82	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR027W	708	3	3	0	0	4.23728813559322	2051.95551360447	3	3	0	0	4.23728813559322	2051.95551360447
YAR028W	705	1	1	0	0	1.41843971631206	686.89574639809	1	1	0	0	1.41843971631206	686.89574639809
YAR029W	225	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR030C	342	1	1	0	0	2.92397660818713	1415.96930178554	1	1	0	0	2.92397660818713	1415.96930178554
YAR031W	897	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR033W	705	2	2	0	0	2.83687943262411	1373.79149279618	2	2	0	0	2.83687943262411	1373.79149279618
YAR035W	2064	1	1	0	0	0.484496124031008	234.622820353999	1	1	0	0	0.484496124031008	234.622820353999
YAR035C-A	81	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR042W	3567	11	11	0	0	3.08382394168769	1493.37721147104	11	11	0	0	3.08382394168769	1493.37721147104
YAR047C	321	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR050W	4614	2	2	0	0	0.433463372345037	209.90962341164	1	1	0	0	0.216731686172518	104.95481170582
YAR053W	297	1	1	0	0	3.36700336700337	1630.51010508638	1	1	0	0	3.36700336700337	1630.51010508638
YAR060C	336	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR061W	204	1	1	0	0	4.90196078431373	2373.83088828752	1	1	0	0	4.90196078431373	2373.83088828752
YAR062W	597	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR064W	300	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR066W	612	1	1	0	0	1.63398692810458	791.276962762506	1	1	0	0	1.63398692810458	791.276962762506
YAR068W	486	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR069C	294	0	0	NA	0	0	0	0	0	NA	0	0	0
YAR070C	300	0	0	NA	0	0	0	0	0	NA	0	0	0