[2020-10-27 17:42:05,696] multiqc [DEBUG ] No MultiQC config found: /opt/conda/envs/nf-core-rnaseq-1.4.2/lib/python3.6/site-packages/multiqc_config.yaml [2020-10-27 17:42:05,696] multiqc [DEBUG ] No MultiQC config found: /.multiqc_config.yaml [2020-10-27 17:42:05,702] multiqc [DEBUG ] Loading config settings from: multiqc_config.yaml [2020-10-27 17:42:05,702] multiqc [DEBUG ] Added to filename clean extensions: ['_R1', '_R2', '.hisat', '_subsamp', '.sorted'] [2020-10-27 17:42:05,702] multiqc [DEBUG ] New config 'report_comment': This report has been generated by the nf-core/rnaseq analysis pipeline. For information about how to interpret these results, please see the documentation. [2020-10-27 17:42:05,703] multiqc [DEBUG ] New config 'top_modules': ['edgeR-sample-distances', 'sample-similarity', 'DupRadar', 'biotype-counts'] [2020-10-27 17:42:05,703] multiqc [DEBUG ] New config 'report_section_order': {'software_versions': {'order': -1000}, 'nf-core-rnaseq-summary': {'order': -1100}} [2020-10-27 17:42:05,704] multiqc [DEBUG ] New config 'table_columns_visible': {'FastQC': {'percent_duplicates': False}} [2020-10-27 17:42:05,704] multiqc [DEBUG ] New config 'export_plots': True [2020-10-27 17:42:05,710] multiqc [DEBUG ] Loading config settings from: multiqc_config.yaml [2020-10-27 17:42:05,710] multiqc [DEBUG ] Added to filename clean extensions: ['_R1', '_R2', '.hisat', '_subsamp', '.sorted'] [2020-10-27 17:42:05,710] multiqc [DEBUG ] New config 'report_comment': This report has been generated by the nf-core/rnaseq analysis pipeline. For information about how to interpret these results, please see the documentation. [2020-10-27 17:42:05,710] multiqc [DEBUG ] New config 'top_modules': ['edgeR-sample-distances', 'sample-similarity', 'DupRadar', 'biotype-counts'] [2020-10-27 17:42:05,710] multiqc [DEBUG ] New config 'report_section_order': {'software_versions': {'order': -1000}, 'nf-core-rnaseq-summary': {'order': -1100}} [2020-10-27 17:42:05,710] multiqc [DEBUG ] New config 'table_columns_visible': {'FastQC': {'percent_duplicates': False}} [2020-10-27 17:42:05,710] multiqc [DEBUG ] New config 'export_plots': True [2020-10-27 17:42:05,711] multiqc [DEBUG ] Command used: /opt/conda/envs/nf-core-rnaseq-1.4.2/bin/multiqc . -f --config multiqc_config.yaml -m custom_content -m picard -m preseq -m rseqc -m featureCounts -m hisat2 -m star -m cutadapt -m sortmerna -m fastqc -m qualimap -m salmon [2020-10-27 17:42:07,052] multiqc [WARNING] MultiQC Version v1.9 now available! [2020-10-27 17:42:07,052] multiqc [INFO ] This is MultiQC v1.7 [2020-10-27 17:42:07,052] multiqc [DEBUG ] Command : /opt/conda/envs/nf-core-rnaseq-1.4.2/bin/multiqc . -f --config multiqc_config.yaml -m custom_content -m picard -m preseq -m rseqc -m featureCounts -m hisat2 -m star -m cutadapt -m sortmerna -m fastqc -m qualimap -m salmon [2020-10-27 17:42:07,052] multiqc [DEBUG ] Working dir : /home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95 [2020-10-27 17:42:07,053] multiqc [INFO ] Template : default [2020-10-27 17:42:07,053] multiqc [INFO ] Searching '.' [2020-10-27 17:42:07,054] multiqc [INFO ] Only using modules custom_content, picard, preseq, rseqc, featureCounts, hisat2, star, cutadapt, sortmerna, fastqc, qualimap, salmon [2020-10-27 17:42:07,054] multiqc [DEBUG ] Analysing modules: custom_content, qualimap, preseq, rseqc, featureCounts, picard, salmon, star, hisat2, cutadapt, sortmerna, fastqc [2020-10-27 17:42:07,054] multiqc [DEBUG ] Using temporary directory for creating report: /tmp/tmpbk5i40bz [2020-10-27 17:42:07,179] multiqc [DEBUG ] Ignored search patterns as didn't match running modules: adapterRemoval, afterqc, bamtools/stats, bbmap/stats, bbmap/aqhist, bbmap/bhist, bbmap/bincov, bbmap/bqhist, bbmap/covhist, bbmap/covstats, bbmap/ehist, bbmap/gchist, bbmap/idhist, bbmap/ihist, bbmap/indelhist, bbmap/lhist, bbmap/mhist, bbmap/qahist, bbmap/qhist, bbmap/rpkm, bbmap/statsfile_machine, bbmap/statsfile, bcftools/stats, bcl2fastq, biobloomtools, biscuit/align_mapq, biscuit/align_strand, biscuit/align_isize, biscuit/covdist_cpg, biscuit/covdist_cpg_q40, biscuit/covdist_cpg_q40_botgc, biscuit/covdist_cpg_q40_topgc, biscuit/covdist, biscuit/covdist_q40, biscuit/covdist_q40_botgc, biscuit/covdist_q40_topgc, biscuit/qc_cv, biscuit/qc_cpg_cv, biscuit/qc_cpg_dist, biscuit/dup_report, biscuit/markdup_report, biscuit/retention_cph_readpos, biscuit/retention_cpg_readpos, biscuit/retention_dist, biscuit/retention_dist_byread, biscuit/retention_rate_bybase, biscuit/retention_rate_byread, bismark/align, bismark/dedup, bismark/meth_extract, bismark/m_bias, bismark/bam2nuc, bowtie1, bowtie2, busco, clipandmerge, clusterflow/logs, clusterflow/runfiles, conpair/concordance, conpair/contamination, damageprofiler, dedup, deeptools/bamPEFragmentSizeTable, deeptools/bamPEFragmentSizeDistribution, deeptools/estimateReadFiltering, deeptools/plotCorrelationData, deeptools/plotCoverageStdout, deeptools/plotCoverageOutRawCounts, deeptools/plotEnrichment, deeptools/plotFingerprintOutRawCounts, deeptools/plotFingerprintOutQualityMetrics, deeptools/plotPCAData, deeptools/plotProfile, fastp, fastq_screen, flash/log, flash/hist, flexbar, gatk/varianteval, gatk/base_recalibrator, goleft_indexcov/roc, goleft_indexcov/ped, happy, htseq, hicexplorer, hicup, hicpro/mmapstat, hicpro/mpairstat, hicpro/mergestat, hicpro/mRSstat, hicpro/assplit, homer/findpeaks, homer/GCcontent, homer/genomeGCcontent, homer/RestrictionDistribution, homer/LengthDistribution, homer/tagInfo, homer/FreqDistribution, interop/summary, interop/index-summary, jellyfish, kallisto, kat, leehom, longranger/summary, longranger/invocation, macs2, methylQA, minionqc, mirtrace/summary, mirtrace/length, mirtrace/contaminationbasic, mirtrace/mirnacomplexity, disambiguate, peddy/summary_table, peddy/het_check, peddy/ped_check, peddy/sex_check, peddy/background_pca, phantompeakqualtools/out, prokka, qorts, quast, rna_seqc/metrics, rna_seqc/coverage, rna_seqc/correlation, rsem, samblaster, samtools/stats, samtools/flagstat, samtools/idxstats, samtools/rmdup, sargasso, skewer, slamdunk/summary, slamdunk/PCA, slamdunk/rates, slamdunk/utrrates, slamdunk/tcperreadpos, slamdunk/tcperutrpos, snpeff, stacks/gstacks, stacks/populations, stacks/sumstats, supernova/report, supernova/summary, supernova/molecules, supernova/kmers, theta2, tophat, trimmomatic, vcftools/relatedness2, vcftools/tstv_by_count, vcftools/tstv_by_qual, vcftools/tstv_summary, verifybamid/selfsm [2020-10-27 17:42:07,253] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: qualimapReport.html [2020-10-27 17:42:07,365] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: qualimapReport.html [2020-10-27 17:42:07,477] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: qualimapReport.html [2020-10-27 17:42:07,588] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: qualimapReport.html [2020-10-27 17:42:07,770] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: edgeR_MDS_plot.pdf [2020-10-27 17:42:07,770] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: log2CPM_sample_correlation_heatmap.pdf [2020-10-27 17:42:07,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: log2CPM_sample_distances_dendrogram.pdf [2020-10-27 17:42:07,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_subsamp_fastqc.html [2020-10-27 17:42:07,774] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_subsamp_fastqc.html [2020-10-27 17:42:07,774] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_subsamp_fastqc.html [2020-10-27 17:42:07,774] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_subsamp_fastqc.html [2020-10-27 17:42:07,783] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_subsampAligned.sortedByCoord.out.rseqc.splice_junction.pdf [2020-10-27 17:42:07,788] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_subsampAligned.sortedByCoord.out.rseqc.splice_junction.pdf [2020-10-27 17:42:07,788] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_subsampAligned.sortedByCoord.out.rseqc.junctionSaturation_plot.pdf [2020-10-27 17:42:07,794] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_subsampAligned.sortedByCoord.out.rseqc.splice_events.pdf [2020-10-27 17:42:07,799] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_subsampAligned.sortedByCoord.out.read_duplication.DupRate_plot.pdf [2020-10-27 17:42:07,805] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_subsampAligned.sortedByCoord.out.rseqc.junctionSaturation_plot.pdf [2020-10-27 17:42:07,826] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_subsampAligned.sortedByCoord.out.rseqc.splice_junction.pdf [2020-10-27 17:42:07,836] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_subsampAligned.sortedByCoord.out.rseqc.splice_events.pdf [2020-10-27 17:42:07,836] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_subsampAligned.sortedByCoord.out.rseqc.splice_junction.pdf [2020-10-27 17:42:07,853] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_subsampAligned.sortedByCoord.out.rseqc.splice_events.pdf [2020-10-27 17:42:07,853] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_subsampAligned.sortedByCoord.out.read_duplication.DupRate_plot.pdf [2020-10-27 17:42:07,857] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_subsampAligned.sortedByCoord.out.rseqc.junctionSaturation_plot.pdf [2020-10-27 17:42:07,865] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_subsampAligned.sortedByCoord.out.read_duplication.DupRate_plot.pdf [2020-10-27 17:42:07,865] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_subsampAligned.sortedByCoord.out.rseqc.junctionSaturation_plot.pdf [2020-10-27 17:42:07,873] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_subsampAligned.sortedByCoord.out.read_duplication.DupRate_plot.pdf [2020-10-27 17:42:07,885] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_subsampAligned.sortedByCoord.out.rseqc.splice_events.pdf [2020-10-27 17:42:07,896] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_duprateExpDens.pdf [2020-10-27 17:42:07,897] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_duprateExpBoxplot.pdf [2020-10-27 17:42:07,897] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_duprateExpDens.pdf [2020-10-27 17:42:07,898] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_expressionHist.pdf [2020-10-27 17:42:07,898] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_duprateExpDens.pdf [2020-10-27 17:42:07,898] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_duprateExpDens.pdf [2020-10-27 17:42:07,904] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_duprateExpBoxplot.pdf [2020-10-27 17:42:07,904] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238379_duprateExpBoxplot.pdf [2020-10-27 17:42:07,904] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_duprateExpBoxplot.pdf [2020-10-27 17:42:07,915] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238355_expressionHist.pdf [2020-10-27 17:42:07,921] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238359_expressionHist.pdf [2020-10-27 17:42:07,921] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: SRR4238351_expressionHist.pdf [2020-10-27 17:42:08,792] multiqc.modules.custom_content.custom_content [INFO ] nf-core-rnaseq-summary: Found 1 sample (html) [2020-10-27 17:42:08,792] multiqc.modules.custom_content.custom_content [INFO ] nf-core-rnaseq-summary: Found 1752 samples (html) [2020-10-27 17:42:08,792] multiqc.modules.custom_content.custom_content [INFO ] software_versions: Found 1 sample (html) [2020-10-27 17:42:08,793] multiqc.modules.custom_content.custom_content [INFO ] software_versions: Found 1055 samples (html) [2020-10-27 17:42:10,641] multiqc.modules.custom_content.custom_content [INFO ] biotype-counts: Found 4 samples (bargraph) [2020-10-27 17:42:10,641] multiqc.modules.custom_content.custom_content [INFO ] sample-similarity: Found 4 samples (heatmap) [2020-10-27 17:42:10,642] multiqc.modules.custom_content.custom_content [INFO ] edgeR-sample-distances: Found 4 samples (scatter) [2020-10-27 17:42:11,880] multiqc.modules.custom_content.custom_content [INFO ] DupRadar: Found 4 samples (linegraph) [2020-10-27 17:42:15,110] multiqc.modules.qualimap.qualimap [INFO ] Found 4 RNASeq reports [2020-10-27 17:42:15,194] multiqc.modules.preseq.preseq [INFO ] Found 4 reports [2020-10-27 17:42:18,417] multiqc.modules.rseqc.rseqc [INFO ] Found 4 read_distribution reports [2020-10-27 17:42:19,702] multiqc.modules.rseqc.rseqc [INFO ] Found 4 read_duplication reports [2020-10-27 17:42:23,421] multiqc.modules.rseqc.rseqc [INFO ] Found 4 junction_saturation reports [2020-10-27 17:42:24,295] multiqc.modules.rseqc.rseqc [INFO ] Found 4 infer_experiment reports [2020-10-27 17:42:24,304] multiqc.modules.featureCounts.feature_counts [INFO ] Found 4 reports [2020-10-27 17:42:26,290] multiqc [DEBUG ] No samples found: picard [2020-10-27 17:42:26,295] multiqc [DEBUG ] No samples found: salmon [2020-10-27 17:42:26,315] multiqc.modules.star.star [INFO ] Found 4 reports [2020-10-27 17:42:28,177] multiqc [DEBUG ] No samples found: hisat2 [2020-10-27 17:42:28,192] multiqc.modules.cutadapt.cutadapt [INFO ] Found 4 reports [2020-10-27 17:42:30,924] multiqc [DEBUG ] No samples found: sortmerna [2020-10-27 17:42:30,952] multiqc.modules.fastqc.fastqc [INFO ] Found 4 reports [2020-10-27 17:42:42,488] multiqc [INFO ] Compressing plot data [2020-10-27 17:42:42,708] multiqc [INFO ] Report : multiqc_report.html [2020-10-27 17:42:42,709] multiqc [INFO ] Data : multiqc_data [2020-10-27 17:42:42,709] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_featureCounts.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,710] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_qualimap_gene_coverage_profile_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,710] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_featureCounts_biotype_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,711] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_per_sequence_gc_content_plot_Percentages.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,711] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_rseqc_infer_experiment_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,712] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_rseqc_infer_experiment.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,712] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_general_stats.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,712] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_qualimap_genomic_origin_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,713] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_mqc_mplplot_udhsozbwjv_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,713] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_rseqc_read_dups_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,714] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_rseqc_junction_saturation_plot_All_Junctions.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,714] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_cutadapt_plot_Counts.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,715] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_sequence_length_distribution_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,715] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_fastqc.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,715] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_per_base_n_content_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,716] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_per_sequence_quality_scores_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,716] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_rseqc_junction_saturation_plot_Known_Junctions.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,717] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_rseqc_junction_saturation_plot_Novel_Junctions.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,717] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_preseq_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,718] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_rseqc_read_distribution.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,718] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_sequence_counts_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,718] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_cutadapt_plot_Obs_Exp.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,719] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_per_sequence_gc_content_plot_Counts.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,719] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_data.json' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,721] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_cutadapt.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,721] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_star.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,721] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_rseqc_read_distribution_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,722] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_overrepresented_sequencesi_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,722] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/multiqc_sources.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,723] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_star_alignment_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,723] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_sequence_duplication_levels_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,724] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_featureCounts_assignment_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,724] multiqc [DEBUG ] Moving data file from '/tmp/tmpbk5i40bz/multiqc_data/mqc_fastqc_per_base_sequence_quality_plot_1.txt' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_data' [2020-10-27 17:42:42,725] multiqc [INFO ] Plots : multiqc_plots [2020-10-27 17:42:42,725] multiqc [DEBUG ] Moving plots directory from '/tmp/tmpbk5i40bz/multiqc_plots/svg' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_plots' [2020-10-27 17:42:42,737] multiqc [DEBUG ] Moving plots directory from '/tmp/tmpbk5i40bz/multiqc_plots/pdf' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_plots' [2020-10-27 17:42:42,747] multiqc [DEBUG ] Moving plots directory from '/tmp/tmpbk5i40bz/multiqc_plots/png' to '/home/srlab/Documents/Shelly/work/58/eebd6dfe27857f1cf43b7f79ad8f95/multiqc_plots' [2020-10-27 17:42:42,943] multiqc [INFO ] MultiQC complete