Processes execution timeline
Launch time:
04 Nov 2020 15:54
Elapsed time:
11h 42m 40s
Legend: job wall time / memory usage (RAM)
9m 38s / 640.2 MB
8m 43s / 635.1 MB
40.8s / 291.8 MB
6m 45s / 623 MB
1m 5s / 2.8 GB
15.3s / 97.4 MB
8m 52s / 648 MB
5.4s / 3.7 MB
57m 31s / 323.5 MB
53m 53s / 352.8 MB
58m 55s / 355 MB
43m 27s / 321.6 MB
25m 45s / 11.4 GB
20m 39s / 3.3 GB
21m 39s / 3.3 GB
16m 33s / 3.3 GB
22m 42s / 3.3 GB
3m 50s / 17.9 GB
3m 52s / 18.9 GB
13m 36s / 10.2 MB
6m 15s / 498.2 MB
2m 49s / 14.4 GB
20m 11s / 4.8 GB
4m 1s / 20.3 GB
4m 2s / 4.3 GB
14m 47s / 14.8 MB
6m 5s / 521.3 MB
4m 20s / 226.4 MB
3m 39s / 5.8 GB
4m 59s / 523.6 MB
5m / 293.7 MB
10m 44s / 10.3 MB
6m 31s / 517.3 MB
20m 39s / 6.2 GB
3m 22s / 5.7 GB
3m 34s / 239.3 MB
15m / 18.6 MB
3m 54s / 6.1 GB
47m 47s / 6.6 GB
15m 44s / 4.6 GB
4m 42s / 225.1 MB
21m 47s / 4.4 GB
48m 48s / 6 GB
5m 9s / 406 MB
6m 5s / 479.3 MB
4m 21s / 413.1 MB
8s / 174.9 MB
5m 39s / 397.3 MB
39m 40s / 5.9 GB
54m 19s / 8.6 GB
3.3s / 17.7 MB
4h / -
16:00
17:00
18:00
19:00
20:00
21:00
22:00
23:00
00:00
01:00
02:00
03:00
fastqc (Pool32_8_P_31)
fastqc (Pool26_16_P_31)
makeHisatSplicesites (GCF_000233375.1_ICSASG_v2_genomic.FIXED.gtf)
fastqc (Pool32_16_P_31)
makeBED12 (GCF_000233375.1_ICSASG_v2_genomic.FIXED.gtf)
get_software_versions
fastqc (Pool26_8_P_31)
output_documentation
trim_galore (Pool32_8_P_31)
trim_galore (Pool26_16_P_31)
trim_galore (Pool26_8_P_31)
trim_galore (Pool32_16_P_31)
makeHISATindex (GCF_000233375.1_ICSASG_v2_genomic.fa)
hisat2Align (Pool26_16_P_31)
hisat2Align (Pool32_8_P_31)
hisat2Align (Pool32_16_P_31)
hisat2Align (Pool26_8_P_31)
hisat2_sortOutput (Pool26_16_P_31_1)
hisat2_sortOutput (Pool32_8_P_31_1)
preseq (Pool26_16_P_31_1)
stringtieFPKM (Pool26_16_P_31_1)
hisat2_sortOutput (Pool32_16_P_31_1)
markDuplicates (Pool26_16_P_31_1)
hisat2_sortOutput (Pool26_8_P_31_1)
qualimap (Pool26_16_P_31_1.sorted)
preseq (Pool32_8_P_31_1)
stringtieFPKM (Pool32_8_P_31_1)
featureCounts (Pool26_16_P_31_1)
qualimap (Pool32_8_P_31_1.sorted)
stringtieFPKM (Pool32_16_P_31_1)
featureCounts (Pool32_8_P_31_1)
preseq (Pool32_16_P_31_1)
stringtieFPKM (Pool26_8_P_31_1)
markDuplicates (Pool32_8_P_31_1)
qualimap (Pool32_16_P_31_1.sorted)
featureCounts (Pool32_16_P_31_1)
preseq (Pool26_8_P_31_1)
qualimap (Pool26_8_P_31_1.sorted)
rseqc (Pool26_16_P_31_1)
markDuplicates (Pool32_16_P_31_1)
featureCounts (Pool26_8_P_31_1)
markDuplicates (Pool26_8_P_31_1)
rseqc (Pool32_8_P_31_1)
dupradar (Pool26_16_P_31_1)
dupradar (Pool32_8_P_31_1)
dupradar (Pool32_16_P_31_1)
sample_correlation (Pool26_16_P_31_1)
dupradar (Pool26_8_P_31_1)
rseqc (Pool32_16_P_31_1)
rseqc (Pool26_8_P_31_1)
merge_featureCounts (Pool26_16_P_31_1_gene.featureCounts)
multiqc