+ input_files=/gscratch/scrubbed/strigg/analyses/20200613/ + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_1_S13_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_1_S13_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_2_S14_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_2_S14_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_3_S15_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_3_S15_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_4_S16_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_26psu_4_S16_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_1_S1_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_1_S1_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_2_S2_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_2_S2_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_3_S3_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_3_S3_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_4_S4_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/16C_32psu_4_S4_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_1_S9_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_1_S9_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_2_S10_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_2_S10_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_3_S11_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_3_S11_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_4_S12_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_26psu_4_S12_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_1_S5_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_1_S5_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_2_S6_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_2_S6_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_3_S7_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_3_S7_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_4_S8_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/8C_32psu_4_S8_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/CTRL_16C_26psu_1_S19_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/CTRL_16C_26psu_1_S19_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/CTRL_16C_26psu_2_S21_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/CTRL_16C_26psu_2_S21_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/CTRL_8C_26psu_1_S17_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/CTRL_8C_26psu_1_S17_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + for f in '${input_files}*_5x.bed' + awk '-F\t' '{print $1"\t"$3-1"\t""+""\t""CGA""\t"$5"\t"$6"\t"1}' /gscratch/scrubbed/strigg/analyses/20200613/CTRL_8C_26psu_2_S18_R1_001_val_1_bismark_bt2_pe_5x.bed + gzip ++ basename /gscratch/scrubbed/strigg/analyses/20200613/CTRL_8C_26psu_2_S18_R1_001_val_1_bismark_bt2_pe_5x.bed _R1_001_val_1_bismark_bt2_pe_5x.bed + methylpy DMRfind --allc-files 16C_26psu_1_S13_allc_5x.tsv.gz 16C_26psu_2_S14_allc_5x.tsv.gz 16C_26psu_3_S15_allc_5x.tsv.gz 16C_26psu_4_S16_allc_5x.tsv.gz 16C_32psu_1_S1_allc_5x.tsv.gz 16C_32psu_2_S2_allc_5x.tsv.gz 16C_32psu_3_S3_allc_5x.tsv.gz 16C_32psu_4_S4_allc_5x.tsv.gz 8C_26psu_1_S9_allc_5x.tsv.gz 8C_26psu_2_S10_allc_5x.tsv.gz 8C_26psu_3_S11_allc_5x.tsv.gz 8C_26psu_4_S12_allc_5x.tsv.gz 8C_32psu_1_S5_allc_5x.tsv.gz 8C_32psu_2_S6_allc_5x.tsv.gz 8C_32psu_3_S7_allc_5x.tsv.gz 8C_32psu_4_S8_allc_5x.tsv.gz CTRL_16C_26psu_1_S19_allc_5x.tsv.gz CTRL_16C_26psu_2_S21_allc_5x.tsv.gz CTRL_8C_26psu_1_S17_allc_5x.tsv.gz CTRL_8C_26psu_2_S18_allc_5x.tsv.gz --samples 16C_26psu_1 16C_26psu_2 16C_26psu_3 16C_26psu_4 16C_32psu_1 16C_32psu_2 16C_32psu_3 16C_32psu_4 8C_26psu_1 8C_26psu_2 8C_26psu_3 8C_26psu_4 8C_32psu_1 8C_32psu_2 8C_32psu_3 8C_32psu_4 CTRL_16C_26psu_1 CTRL_16C_26psu_2 CTRL_8C_26psu_1 CTRL_8C_26psu_2 --mc-type CGN --num-procs 8 --output-prefix DMR250bp_cov5x --dmr-max-dist 250 --min-num-dms 3 Filtering allc files using 8 node(s). Thu Jul 2 11:45:45 2020 Splitting allc files for chromosome NC_001960.1 Thu Jul 2 11:45:50 2020 Running rms tests for chromosome NC_001960.1 Thu Jul 2 11:45:50 2020 Splitting allc files for chromosome NC_027300.1 Thu Jul 2 11:45:50 2020 Ran 67 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_4.tsv Ran 64 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_1.tsv Ran 68 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_2.tsv Ran 57 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_7.tsv Ran 69 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_6.tsv Ran 68 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_3.tsv Ran 66 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_5.tsv Running rms tests for chromosome NC_027300.1 Thu Jul 2 11:45:53 2020 Splitting allc files for chromosome NC_027301.1 Thu Jul 2 11:45:53 2020 Ran 68 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_001960.1_chunk_0.tsv Ran 5862 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_0.tsv Running rms tests for chromosome NC_027301.1 Thu Jul 2 11:46:11 2020 Splitting allc files for chromosome NC_027302.1 Thu Jul 2 11:46:11 2020 Ran 9946 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_5.tsv Ran 9936 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_7.tsv Ran 1154 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_0.tsv Ran 12095 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_4.tsv Ran 12310 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_2.tsv Ran 3511 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_1.tsv Ran 5210 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_2.tsv Ran 16330 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_6.tsv Ran 17139 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_3.tsv Running rms tests for chromosome NC_027302.1 Thu Jul 2 11:46:24 2020 Splitting allc files for chromosome NC_027303.1 Thu Jul 2 11:46:24 2020 Ran 18289 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027300.1_chunk_1.tsv Ran 3977 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_6.tsv Ran 2978 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_7.tsv Ran 6946 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_5.tsv Ran 9717 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_3.tsv Ran 8877 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027301.1_chunk_4.tsv Ran 6207 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_0.tsv Ran 5656 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_3.tsv Ran 2691 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_7.tsv Running rms tests for chromosome NC_027303.1 Thu Jul 2 11:46:38 2020 Splitting allc files for chromosome NC_027304.1 Thu Jul 2 11:46:38 2020 Ran 8580 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_2.tsv Ran 9263 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_1.tsv Ran 6105 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_6.tsv Ran 8696 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_4.tsv Ran 8363 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027302.1_chunk_5.tsv Ran 3208 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_0.tsv Running rms tests for chromosome NC_027304.1 Thu Jul 2 11:46:48 2020 Splitting allc files for chromosome NC_027305.1 Thu Jul 2 11:46:48 2020 Ran 5364 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_1.tsv Ran 2808 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_7.tsv Ran 8364 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_2.tsv Ran 4048 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_0.tsv Ran 7296 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_5.tsv Ran 9114 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_4.tsv Ran 7223 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_6.tsv Ran 10606 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027303.1_chunk_3.tsv Ran 1193 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_7.tsv Ran 4923 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_1.tsv Running rms tests for chromosome NC_027305.1 Thu Jul 2 11:47:02 2020 Splitting allc files for chromosome NC_027306.1 Thu Jul 2 11:47:02 2020 Ran 2578 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_6.tsv Ran 5695 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_5.tsv Ran 2967 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_0.tsv Ran 9451 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_2.tsv Ran 10136 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_3.tsv Ran 4722 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_1.tsv Ran 8997 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027304.1_chunk_4.tsv Running rms tests for chromosome NC_027306.1 Thu Jul 2 11:47:13 2020 Splitting allc files for chromosome NC_027307.1 Thu Jul 2 11:47:13 2020 Ran 6085 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_2.tsv Ran 3864 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_7.tsv Ran 5098 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_6.tsv Ran 8393 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_3.tsv Ran 4196 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_0.tsv Ran 7597 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_4.tsv Ran 4918 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_2.tsv Running rms tests for chromosome NC_027307.1 Thu Jul 2 11:47:23 2020 Splitting allc files for chromosome NC_027308.1 Thu Jul 2 11:47:23 2020 Ran 1328 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_7.tsv Ran 1849 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_6.tsv Ran 2592 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_5.tsv Ran 7265 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_1.tsv Ran 9519 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027305.1_chunk_5.tsv Ran 2699 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_0.tsv Ran 1978 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_3.tsv Ran 1211 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_4.tsv Ran 6216 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_3.tsv Ran 500 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_7.tsv Ran 3907 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_1.tsv Ran 3047 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_2.tsv Ran 1985 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_5.tsv Ran 1415 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027307.1_chunk_6.tsv Running rms tests for chromosome NC_027308.1 Thu Jul 2 11:47:33 2020 Splitting allc files for chromosome NC_027309.1 Thu Jul 2 11:47:33 2020 Ran 7767 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027306.1_chunk_4.tsv Ran 5640 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_2.tsv Running rms tests for chromosome NC_027309.1 Thu Jul 2 11:47:46 2020 Splitting allc files for chromosome NC_027310.1 Thu Jul 2 11:47:46 2020 Ran 6831 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_7.tsv Ran 7709 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_4.tsv Ran 11906 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_1.tsv Ran 12604 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_5.tsv Ran 13931 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_3.tsv Ran 14242 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_6.tsv Ran 15248 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027308.1_chunk_0.tsv Ran 9498 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_2.tsv Ran 8811 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_0.tsv Ran 5091 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_3.tsv Running rms tests for chromosome NC_027310.1 Thu Jul 2 11:48:06 2020 Splitting allc files for chromosome NC_027311.1 Thu Jul 2 11:48:06 2020 Ran 11741 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_1.tsv Ran 4805 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_2.tsv Ran 8689 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_6.tsv Ran 7788 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_7.tsv Ran 4318 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_3.tsv Ran 11813 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_4.tsv Ran 7594 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_1.tsv Running rms tests for chromosome NC_027311.1 Thu Jul 2 11:48:22 2020 Splitting allc files for chromosome NC_027312.1 Thu Jul 2 11:48:22 2020 Ran 11945 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027309.1_chunk_5.tsv Ran 3028 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_7.tsv Ran 9904 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_0.tsv Ran 2186 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_0.tsv Ran 7413 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_6.tsv Ran 8864 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_4.tsv Ran 10325 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027310.1_chunk_5.tsv Ran 4163 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_1.tsv Running rms tests for chromosome NC_027312.1 Thu Jul 2 11:48:38 2020 Splitting allc files for chromosome NC_027313.1 Thu Jul 2 11:48:38 2020 Ran 7157 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_2.tsv Ran 4503 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_7.tsv Ran 3229 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_0.tsv Ran 7637 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_6.tsv Ran 4937 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_1.tsv Ran 11740 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_4.tsv Ran 11259 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_5.tsv Running rms tests for chromosome NC_027313.1 Thu Jul 2 11:48:54 2020 Splitting allc files for chromosome NC_027314.1 Thu Jul 2 11:48:54 2020 Ran 3610 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_7.tsv Ran 9666 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027311.1_chunk_3.tsv Ran 11989 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_2.tsv Ran 8671 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_6.tsv Ran 12787 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_3.tsv Ran 10873 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_5.tsv Ran 13610 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027312.1_chunk_4.tsv Ran 7686 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_1.tsv Ran 3858 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_5.tsv Running rms tests for chromosome NC_027314.1 Thu Jul 2 11:49:14 2020 Splitting allc files for chromosome NC_027315.1 Thu Jul 2 11:49:14 2020 Ran 6907 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_3.tsv Ran 9756 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_2.tsv Ran 3904 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_7.tsv Ran 12277 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_0.tsv Ran 6664 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_6.tsv Ran 9232 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027313.1_chunk_4.tsv Ran 4015 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_1.tsv Ran 4127 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_0.tsv Running rms tests for chromosome NC_027315.1 Thu Jul 2 11:49:23 2020 Splitting allc files for chromosome NC_027316.1 Thu Jul 2 11:49:23 2020 Ran 4891 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_7.tsv Ran 5646 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_4.tsv Ran 7852 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_2.tsv Ran 9746 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_6.tsv Ran 5151 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_4.tsv Ran 6582 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_3.tsv Ran 9122 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_1.tsv Ran 13090 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_5.tsv Running rms tests for chromosome NC_027316.1 Thu Jul 2 11:49:42 2020 Splitting allc files for chromosome NC_027317.1 Thu Jul 2 11:49:42 2020 Ran 9245 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_2.tsv Ran 15500 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027314.1_chunk_3.tsv Ran 11665 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_0.tsv Ran 2280 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_7.tsv Ran 3251 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_6.tsv Ran 1546 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_3.tsv Ran 2737 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_1.tsv Ran 8386 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027315.1_chunk_5.tsv Ran 3617 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_2.tsv Running rms tests for chromosome NC_027317.1 Thu Jul 2 11:49:51 2020 Splitting allc files for chromosome NC_027318.1 Thu Jul 2 11:49:51 2020 Ran 1963 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_6.tsv Ran 2287 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_7.tsv Ran 5052 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_4.tsv Ran 1706 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_3.tsv Ran 6199 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_5.tsv Ran 3566 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_2.tsv Ran 9044 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027316.1_chunk_0.tsv Ran 2817 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_4.tsv Running rms tests for chromosome NC_027318.1 Thu Jul 2 11:50:00 2020 Splitting allc files for chromosome NC_027319.1 Thu Jul 2 11:50:00 2020 Ran 2686 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_7.tsv Ran 8971 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_1.tsv Ran 8605 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_0.tsv Ran 8056 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_5.tsv Ran 7835 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027317.1_chunk_6.tsv Ran 7353 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_2.tsv Ran 4134 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_3.tsv Ran 6833 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_0.tsv Running rms tests for chromosome NC_027319.1 Thu Jul 2 11:50:17 2020 Splitting allc files for chromosome NC_027320.1 Thu Jul 2 11:50:17 2020 Ran 3310 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_7.tsv Ran 4491 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_6.tsv Ran 7589 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_1.tsv Ran 8924 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_5.tsv Ran 9476 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027318.1_chunk_4.tsv Ran 5223 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_0.tsv Running rms tests for chromosome NC_027320.1 Thu Jul 2 11:50:28 2020 Splitting allc files for chromosome NC_027321.1 Thu Jul 2 11:50:28 2020 Ran 3658 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_6.tsv Ran 2379 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_7.tsv Ran 7396 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_4.tsv Ran 9028 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_2.tsv Ran 8262 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_3.tsv Ran 5716 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_5.tsv Ran 4104 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_1.tsv Ran 5711 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_0.tsv Ran 3822 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_5.tsv Ran 12133 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027319.1_chunk_1.tsv Running rms tests for chromosome NC_027321.1 Thu Jul 2 11:50:40 2020 Splitting allc files for chromosome NC_027322.1 Thu Jul 2 11:50:40 2020 Ran 4169 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_4.tsv Ran 5416 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_3.tsv Ran 4879 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_6.tsv Ran 1862 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_7.tsv Ran 6235 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027320.1_chunk_2.tsv Ran 2900 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_0.tsv Ran 2858 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_7.tsv Running rms tests for chromosome NC_027322.1 Thu Jul 2 11:50:48 2020 Splitting allc files for chromosome NC_027323.1 Thu Jul 2 11:50:48 2020 Ran 3922 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_5.tsv Ran 3391 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_6.tsv Ran 6405 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_4.tsv Ran 7083 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_1.tsv Ran 8078 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_2.tsv Ran 2667 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_2.tsv Ran 6270 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027321.1_chunk_3.tsv Running rms tests for chromosome NC_027323.1 Thu Jul 2 11:50:58 2020 Splitting allc files for chromosome NC_027324.1 Thu Jul 2 11:50:58 2020 Ran 2745 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_6.tsv Ran 2940 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_4.tsv Ran 2207 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_7.tsv Ran 6754 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_0.tsv Ran 3467 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_5.tsv Ran 6216 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_1.tsv Ran 5799 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027322.1_chunk_3.tsv Ran 3944 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_0.tsv Ran 3307 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_2.tsv Ran 2987 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_6.tsv Running rms tests for chromosome NC_027324.1 Thu Jul 2 11:51:06 2020 Splitting allc files for chromosome NC_027325.1 Thu Jul 2 11:51:06 2020 Ran 3763 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_3.tsv Ran 2041 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_7.tsv Ran 3604 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_5.tsv Ran 3873 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_4.tsv Ran 4595 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027323.1_chunk_1.tsv Ran 1061 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_5.tsv Running rms tests for chromosome NC_027325.1 Thu Jul 2 11:51:10 2020 Splitting allc files for chromosome NC_027326.1 Thu Jul 2 11:51:10 2020 Ran 2967 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_6.tsv Ran 2842 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_0.tsv Ran 2517 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_7.tsv Ran 4421 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_4.tsv Ran 6403 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_3.tsv Ran 5331 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_1.tsv Ran 6009 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027324.1_chunk_2.tsv Ran 2340 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_4.tsv Ran 1088 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_5.tsv Ran 4022 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_3.tsv Ran 4018 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_2.tsv Running rms tests for chromosome NC_027326.1 Thu Jul 2 11:51:20 2020 Splitting allc files for chromosome NC_027327.1 Thu Jul 2 11:51:20 2020 Ran 1183 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_7.tsv Ran 1267 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_6.tsv Ran 5301 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_0.tsv Ran 5148 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027325.1_chunk_1.tsv Ran 2498 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_6.tsv Ran 2945 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_4.tsv Ran 2262 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_7.tsv Running rms tests for chromosome NC_027327.1 Thu Jul 2 11:51:26 2020 Splitting allc files for chromosome NC_027328.1 Thu Jul 2 11:51:26 2020 Ran 3201 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_2.tsv Ran 3338 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_5.tsv Ran 3574 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_3.tsv Ran 5355 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_0.tsv Ran 4519 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027326.1_chunk_1.tsv Ran 1970 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_5.tsv Ran 3019 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_4.tsv Running rms tests for chromosome NC_027328.1 Thu Jul 2 11:51:32 2020 Ran 939 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_6.tsv Ran 1347 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_7.tsv Ran 4014 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_2.tsv Ran 4466 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_3.tsv Ran 3751 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_1.tsv Ran 5294 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027327.1_chunk_0.tsv Ran 1179 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_6.tsv Ran 1966 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_5.tsv Ran 2694 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_4.tsv Ran 1872 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_7.tsv Ran 3790 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_0.tsv Ran 4438 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_1.tsv Ran 4394 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_2.tsv Ran 4381 root mean square tests. Results in DMR250bp_cov5x_rms_results_for_NC_027328.1_chunk_3.tsv Merging sorted DMR250bp_cov5x_rms_results.tsv files. Thu Jul 2 11:51:41 2020 Begin FDR Correction Thu Jul 2 11:55:41 2020 m0 estimate for iteration 0: 1384805 Histogram FDR correction did not converge. Using the smallest p-value 0.0003333333333333333 as cutoff. Calculating Residual Cutoff Thu Jul 2 11:55:46 2020 Begin Defining Windows Thu Jul 2 11:55:51 2020 Adding Methylation Levels Thu Jul 2 11:56:15 2020 Done Thu Jul 2 11:56:24 2020