8C_32psu_4_S8_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 9188131 lines in total Total number of methylation call strings processed: 18376262 Final Cytosine Methylation Report ================================= Total number of C's analysed: 216242998 Total methylated C's in CpG context: 15456277 Total methylated C's in CHG context: 353563 Total methylated C's in CHH context: 1409697 Total C to T conversions in CpG context: 4976258 Total C to T conversions in CHG context: 51201001 Total C to T conversions in CHH context: 142846202 C methylated in CpG context: 75.6% C methylated in CHG context: 0.7% C methylated in CHH context: 1.0%