8C_26psu_4_S12_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 5525237 lines in total Total number of methylation call strings processed: 11050474 Final Cytosine Methylation Report ================================= Total number of C's analysed: 141193574 Total methylated C's in CpG context: 8118089 Total methylated C's in CHG context: 280695 Total methylated C's in CHH context: 2053467 Total C to T conversions in CpG context: 2507140 Total C to T conversions in CHG context: 34018420 Total C to T conversions in CHH context: 94215763 C methylated in CpG context: 76.4% C methylated in CHG context: 0.8% C methylated in CHH context: 2.1%