8C_26psu_3_S11_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 11196498 lines in total Total number of methylation call strings processed: 22392996 Final Cytosine Methylation Report ================================= Total number of C's analysed: 208972325 Total methylated C's in CpG context: 17121638 Total methylated C's in CHG context: 388506 Total methylated C's in CHH context: 2029680 Total C to T conversions in CpG context: 4824157 Total C to T conversions in CHG context: 53028655 Total C to T conversions in CHH context: 131579689 C methylated in CpG context: 78.0% C methylated in CHG context: 0.7% C methylated in CHH context: 1.5%