8C_26psu_2_S10_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 12216230 lines in total Total number of methylation call strings processed: 24432460 Final Cytosine Methylation Report ================================= Total number of C's analysed: 263214565 Total methylated C's in CpG context: 19321408 Total methylated C's in CHG context: 460825 Total methylated C's in CHH context: 2231143 Total C to T conversions in CpG context: 5713210 Total C to T conversions in CHG context: 64285157 Total C to T conversions in CHH context: 171202822 C methylated in CpG context: 77.2% C methylated in CHG context: 0.7% C methylated in CHH context: 1.3%