8C_26psu_1_S9_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 11877543 lines in total Total number of methylation call strings processed: 23755086 Final Cytosine Methylation Report ================================= Total number of C's analysed: 267019700 Total methylated C's in CpG context: 19614252 Total methylated C's in CHG context: 517054 Total methylated C's in CHH context: 2485827 Total C to T conversions in CpG context: 5625343 Total C to T conversions in CHG context: 65481481 Total C to T conversions in CHH context: 173295743 C methylated in CpG context: 77.7% C methylated in CHG context: 0.8% C methylated in CHH context: 1.4%