16C_26psu_1_S13_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Processed 14373293 lines in total Total number of methylation call strings processed: 28746586 Final Cytosine Methylation Report ================================= Total number of C's analysed: 313633053 Total methylated C's in CpG context: 23441074 Total methylated C's in CHG context: 545238 Total methylated C's in CHH context: 2538071 Total C to T conversions in CpG context: 7102177 Total C to T conversions in CHG context: 76818029 Total C to T conversions in CHH context: 203188464 C methylated in CpG context: 76.7% C methylated in CHG context: 0.7% C methylated in CHH context: 1.2%