Module Section Sample Name Source Bismark alignment 16C_26psu_4_S16_L002_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/16C_26psu_4_S16_L002_R1_001_trimmed_bismark_bt2_SE_report.txt Bismark alignment 16C_26psu_3_S15_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/16C_26psu_3_S15_L001_R1_001_trimmed_bismark_bt2_SE_report.txt Bismark alignment 16C_26psu_3_S15_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/16C_26psu_3_S15_L001_R2_001_trimmed_bismark_bt2_SE_report.txt Bismark alignment 16C_26psu_4_S16_L002_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/16C_26psu_4_S16_L002_R2_001_trimmed_bismark_bt2_SE_report.txt Bismark alignment 8C_26psu_3_S11_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/8C_26psu_3_S11_L001_R2_001_trimmed_bismark_bt2_SE_report.txt Bismark alignment CTRL_8C_26psu_1_S17_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/CTRL_8C_26psu_1_S17_L001_R1_001_trimmed_bismark_bt2_SE_report.txt Bismark alignment CTRL_8C_26psu_1_S17_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/CTRL_8C_26psu_1_S17_L001_R2_001_trimmed_bismark_bt2_SE_report.txt Bismark alignment 8C_26psu_3_S11_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/8C_26psu_3_S11_L001_R1_001_trimmed_bismark_bt2_SE_report.txt Cutadapt all_sections 8C_26psu_3_S11_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/8C_26psu_3_S11_L001_R2_001.fastq.gz_trimming_report.txt Cutadapt all_sections 16C_26psu_4_S16_L002_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/16C_26psu_4_S16_L002_R1_001.fastq.gz_trimming_report.txt Cutadapt all_sections 8C_26psu_3_S11_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/8C_26psu_3_S11_L001_R1_001.fastq.gz_trimming_report.txt Cutadapt all_sections 16C_26psu_3_S15_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/16C_26psu_3_S15_L001_R2_001.fastq.gz_trimming_report.txt Cutadapt all_sections 16C_26psu_4_S16_L002_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/16C_26psu_4_S16_L002_R2_001.fastq.gz_trimming_report.txt Cutadapt all_sections CTRL_8C_26psu_1_S17_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/CTRL_8C_26psu_1_S17_L001_R2_001.fastq.gz_trimming_report.txt Cutadapt all_sections 16C_26psu_3_S15_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/16C_26psu_3_S15_L001_R1_001.fastq.gz_trimming_report.txt Cutadapt all_sections CTRL_8C_26psu_1_S17_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/CTRL_8C_26psu_1_S17_L001_R1_001.fastq.gz_trimming_report.txt FastQC all_sections 16C_26psu_4_S16_L002_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/16C_26psu_4_S16_L002_R1_001_trimmed_fastqc.zip FastQC all_sections 16C_26psu_3_S15_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/16C_26psu_3_S15_L001_R2_001_trimmed_fastqc.zip FastQC all_sections 8C_26psu_3_S11_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/8C_26psu_3_S11_L001_R1_001_trimmed_fastqc.zip FastQC all_sections CTRL_8C_26psu_1_S17_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/CTRL_8C_26psu_1_S17_L001_R2_001_trimmed_fastqc.zip FastQC all_sections 16C_26psu_3_S15_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/16C_26psu_3_S15_L001_R1_001_trimmed_fastqc.zip FastQC all_sections 16C_26psu_4_S16_L002_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/16C_26psu_4_S16_L002_R2_001_trimmed_fastqc.zip FastQC all_sections CTRL_8C_26psu_1_S17_L001_R1_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/CTRL_8C_26psu_1_S17_L001_R1_001_trimmed_fastqc.zip FastQC all_sections 8C_26psu_3_S11_L001_R2_001 /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_FASTQS/FastQC/8C_26psu_3_S11_L001_R2_001_trimmed_fastqc.zip