Total number of alignments analysed in /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/CTRL_8C_26psu_1_S17_L001_R1_001_trimmed_bismark_bt2.bam:	19617734
Total number duplicated alignments removed:	4658217 (23.74%)
Duplicated alignments were found at:	3028673 different position(s)

Total count of deduplicated leftover sequences: 14959517 (76.26% of total)