CTRL_8C_26psu_1_S17_L001_R1_001_trimmed_bismark_bt2.multiple.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 14959517 lines in total Total number of methylation call strings processed: 14959517 Final Cytosine Methylation Report ================================= Total number of C's analysed: 279907062 Total methylated C's in CpG context: 17710139 Total methylated C's in CHG context: 565366 Total methylated C's in CHH context: 6264920 Total C to T conversions in CpG context: 5946621 Total C to T conversions in CHG context: 62475711 Total C to T conversions in CHH context: 186944305 C methylated in CpG context: 74.9% C methylated in CHG context: 0.9% C methylated in CHH context: 3.2%