Total number of alignments analysed in /gscratch/scrubbed/strigg/analyses/20200422/TG_SE_local_aligned/16C_26psu_4_S16_L002_R1_001_trimmed_bismark_bt2.bam:	23536387
Total number duplicated alignments removed:	4456308 (18.93%)
Duplicated alignments were found at:	2937996 different position(s)

Total count of deduplicated leftover sequences: 19080079 (81.07% of total)