16C_26psu_3_S15_L001_R1_001_trimmed_bismark_bt2.multiple.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 14599289 lines in total Total number of methylation call strings processed: 14599289 Final Cytosine Methylation Report ================================= Total number of C's analysed: 272401577 Total methylated C's in CpG context: 16448453 Total methylated C's in CHG context: 745767 Total methylated C's in CHH context: 15904247 Total C to T conversions in CpG context: 5445628 Total C to T conversions in CHG context: 62137782 Total C to T conversions in CHH context: 171719700 C methylated in CpG context: 75.1% C methylated in CHG context: 1.2% C methylated in CHH context: 8.5%