CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 218236 103379 67.86 321615 2 209612 93171 69.23 302783 3 241973 96290 71.53 338263 4 257071 95125 72.99 352196 5 261932 91537 74.10 353469 6 292737 88433 76.80 381170 7 313951 88219 78.06 402170 8 306790 87295 77.85 394085 9 303119 89354 77.23 392473 10 289838 86171 77.08 376009 11 298575 88086 77.22 386661 12 290643 85629 77.24 376272 13 294936 88583 76.90 383519 14 296472 85739 77.57 382211 15 310850 88055 77.93 398905 16 313840 87147 78.27 400987 17 319932 88737 78.29 408669 18 324227 90413 78.19 414640 19 315593 87998 78.20 403591 20 299966 82975 78.33 382941 21 315135 86506 78.46 401641 22 310558 86614 78.19 397172 23 305245 87458 77.73 392703 24 302698 85642 77.95 388340 25 305266 86595 77.90 391861 26 303061 85465 78.00 388526 27 298913 85745 77.71 384658 28 315561 85840 78.61 401401 29 306928 84136 78.49 391064 30 311833 86425 78.30 398258 31 306490 86320 78.02 392810 32 308273 85133 78.36 393406 33 309265 86265 78.19 395530 34 310447 86015 78.30 396462 35 305615 85789 78.08 391404 36 304882 84766 78.25 389648 37 305127 84677 78.28 389804 38 301938 82988 78.44 384926 39 302779 83885 78.31 386664 40 290723 82172 77.96 372895 41 298109 82981 78.23 381090 42 294206 81469 78.31 375675 43 297871 82859 78.24 380730 44 292315 82204 78.05 374519 45 292585 81446 78.22 374031 46 280432 79277 77.96 359709 47 286889 78057 78.61 364946 48 286657 79588 78.27 366245 49 280770 79104 78.02 359874 50 274648 77313 78.03 351961 51 277968 77035 78.30 355003 52 273798 76600 78.14 350398 53 274433 77603 77.96 352036 54 271798 75651 78.23 347449 55 267467 75113 78.07 342580 56 262889 74284 77.97 337173 57 266353 74781 78.08 341134 58 264215 76437 77.56 340652 59 254343 71758 78.00 326101 60 251169 70815 78.01 321984 61 247007 70553 77.78 317560 62 238721 68784 77.63 307505 63 242361 69053 77.83 311414 64 230525 67154 77.44 297679 65 228491 66324 77.50 294815 66 219658 68037 76.35 287695 67 219985 64570 77.31 284555 68 224146 63663 77.88 287809 69 218675 63099 77.61 281774 70 207320 60316 77.46 267636 71 204890 59729 77.43 264619 72 206896 59887 77.55 266783 73 201360 58793 77.40 260153 74 199609 56945 77.80 256554 75 195299 57015 77.40 252314 76 191152 55665 77.45 246817 77 192511 55041 77.77 247552 78 183294 53940 77.26 237234 79 179566 52375 77.42 231941 80 174743 51515 77.23 226258 81 166719 49861 76.98 216580 82 163447 48190 77.23 211637 83 161530 48607 76.87 210137 84 159294 48297 76.73 207591 85 157567 47371 76.89 204938 86 155469 45812 77.24 201281 87 149424 44120 77.20 193544 88 147555 43542 77.21 191097 89 147303 43480 77.21 190783 90 140779 41802 77.10 182581 91 135792 40520 77.02 176312 92 132707 40070 76.81 172777 93 128911 39734 76.44 168645 94 129056 38662 76.95 167718 95 126320 37195 77.25 163515 96 123021 36765 76.99 159786 97 119271 36985 76.33 156256 98 116533 34970 76.92 151503 99 113027 34465 76.63 147492 100 107866 32644 76.77 140510 101 106424 31792 77.00 138216 102 104780 31822 76.70 136602 103 102320 31032 76.73 133352 104 98154 30342 76.39 128496 105 98014 30232 76.43 128246 106 96401 29625 76.49 126026 107 91701 28311 76.41 120012 108 90743 27951 76.45 118694 109 84947 26670 76.11 111617 110 81761 25343 76.34 107104 111 81105 25053 76.40 106158 112 79564 24861 76.19 104425 113 75936 24039 75.95 99975 114 75404 23392 76.32 98796 115 74334 22846 76.49 97180 116 71300 22497 76.02 93797 117 67925 21763 75.73 89688 118 64396 20915 75.48 85311 119 62162 20423 75.27 82585 120 60837 19742 75.50 80579 121 60287 19056 75.98 79343 122 58559 18641 75.85 77200 123 57378 18424 75.69 75802 124 56373 18603 75.19 74976 125 54459 17653 75.52 72112 126 53006 17020 75.69 70026 127 49729 16401 75.20 66130 128 47208 16160 74.50 63368 129 46615 15847 74.63 62462 130 46576 15679 74.81 62255 131 47020 15578 75.11 62598 132 44461 14619 75.26 59080 133 42570 14683 74.35 57253 134 41032 14039 74.51 55071 135 39319 13960 73.80 53279 136 38312 12987 74.68 51299 137 36817 12899 74.05 49716 138 36187 12579 74.21 48766 139 35544 12187 74.47 47731 140 34140 12247 73.60 46387 141 33291 12211 73.16 45502 142 32841 12015 73.21 44856 143 32198 11632 73.46 43830 144 30918 10695 74.30 41613 145 25733 5541 82.28 31274 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 28701 1262394 2.22 1291095 2 24293 867819 2.72 892112 3 18525 839380 2.16 857905 4 13962 857488 1.60 871450 5 16883 852166 1.94 869049 6 22351 849698 2.56 872049 7 13378 859564 1.53 872942 8 13028 872390 1.47 885418 9 11028 852275 1.28 863303 10 10163 875985 1.15 886148 11 12563 894796 1.38 907359 12 9112 913868 0.99 922980 13 10693 886059 1.19 896752 14 8694 874679 0.98 883373 15 10495 898847 1.15 909342 16 8716 906948 0.95 915664 17 8798 875432 0.99 884230 18 7461 900022 0.82 907483 19 7712 906619 0.84 914331 20 7547 915986 0.82 923533 21 7261 899260 0.80 906521 22 7072 898863 0.78 905935 23 6936 896835 0.77 903771 24 7102 889918 0.79 897020 25 6636 890236 0.74 896872 26 7299 932913 0.78 940212 27 6435 877677 0.73 884112 28 7155 893085 0.79 900240 29 6563 895663 0.73 902226 30 7441 885347 0.83 892788 31 6649 877699 0.75 884348 32 7905 902190 0.87 910095 33 6466 879418 0.73 885884 34 7675 879333 0.87 887008 35 6712 877931 0.76 884643 36 7913 897293 0.87 905206 37 6838 875131 0.78 881969 38 7892 878776 0.89 886668 39 6909 867129 0.79 874038 40 7791 867960 0.89 875751 41 6856 873789 0.78 880645 42 7819 880524 0.88 888343 43 7205 884415 0.81 891620 44 7620 881261 0.86 888881 45 7632 855927 0.88 863559 46 7541 860117 0.87 867658 47 7661 834191 0.91 841852 48 7652 839813 0.90 847465 49 7925 837361 0.94 845286 50 7673 840848 0.90 848521 51 8470 811506 1.03 819976 52 7851 818864 0.95 826715 53 8588 816425 1.04 825013 54 8018 796277 1.00 804295 55 8450 790107 1.06 798557 56 7954 774426 1.02 782380 57 9254 754041 1.21 763295 58 8845 768153 1.14 776998 59 9010 750144 1.19 759154 60 8141 744607 1.08 752748 61 8726 723484 1.19 732210 62 8269 713235 1.15 721504 63 8499 708548 1.19 717047 64 8267 709060 1.15 717327 65 8764 687777 1.26 696541 66 8497 682006 1.23 690503 67 8547 668447 1.26 676994 68 8570 672781 1.26 681351 69 8332 648129 1.27 656461 70 8563 645178 1.31 653741 71 8440 624191 1.33 632631 72 8592 621171 1.36 629763 73 8198 601221 1.35 609419 74 8435 601669 1.38 610104 75 8109 585910 1.37 594019 76 8527 578823 1.45 587350 77 8080 564481 1.41 572561 78 8236 548010 1.48 556246 79 7697 542565 1.40 550262 80 8045 544671 1.46 552716 81 7514 521818 1.42 529332 82 8104 514650 1.55 522754 83 7451 502302 1.46 509753 84 7801 488814 1.57 496615 85 7424 476664 1.53 484088 86 7607 470662 1.59 478269 87 7163 454705 1.55 461868 88 7249 447163 1.60 454412 89 6782 428582 1.56 435364 90 6776 421531 1.58 428307 91 6971 413913 1.66 420884 92 6934 406429 1.68 413363 93 6567 392028 1.65 398595 94 6323 381526 1.63 387849 95 6352 373383 1.67 379735 96 6222 373897 1.64 380119 97 6227 363717 1.68 369944 98 6233 358261 1.71 364494 99 6085 352062 1.70 358147 100 5917 341827 1.70 347744 101 5845 322766 1.78 328611 102 5731 321785 1.75 327516 103 5588 307419 1.79 313007 104 5487 309515 1.74 315002 105 5506 291737 1.85 297243 106 5120 288182 1.75 293302 107 5254 283303 1.82 288557 108 5220 276417 1.85 281637 109 4885 266218 1.80 271103 110 4752 257978 1.81 262730 111 4771 248463 1.88 253234 112 4545 249765 1.79 254310 113 4652 236140 1.93 240792 114 4563 231843 1.93 236406 115 4387 225176 1.91 229563 116 4408 223360 1.94 227768 117 4103 213063 1.89 217166 118 4159 210342 1.94 214501 119 4068 204757 1.95 208825 120 4173 202662 2.02 206835 121 3867 194590 1.95 198457 122 3827 190316 1.97 194143 123 3978 181597 2.14 185575 124 3779 179876 2.06 183655 125 3637 172023 2.07 175660 126 3723 168885 2.16 172608 127 3467 164078 2.07 167545 128 3263 158731 2.01 161994 129 3155 151509 2.04 154664 130 3199 149168 2.10 152367 131 3184 145612 2.14 148796 132 3190 141207 2.21 144397 133 2977 134545 2.16 137522 134 2937 130361 2.20 133298 135 2974 126420 2.30 129394 136 2870 127097 2.21 129967 137 2862 120688 2.32 123550 138 2850 116877 2.38 119727 139 2727 114019 2.34 116746 140 3042 112117 2.64 115159 141 3113 109393 2.77 112506 142 3290 106695 2.99 109985 143 3073 101778 2.93 104851 144 3270 96148 3.29 99418 145 2289 50404 4.34 52693 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 139667 2163198 6.06 2302865 2 132456 2438419 5.15 2570875 3 121849 2417816 4.80 2539665 4 106646 2306131 4.42 2412777 5 95674 2209704 4.15 2305378 6 97110 2189786 4.25 2286896 7 87300 2132410 3.93 2219710 8 86528 2122983 3.92 2209511 9 83506 2077898 3.86 2161404 10 83831 2091962 3.85 2175793 11 81434 2121675 3.70 2203109 12 78710 2056350 3.69 2135060 13 73534 2037318 3.48 2110852 14 78691 2055577 3.69 2134268 15 76241 2051980 3.58 2128221 16 76830 2045406 3.62 2122236 17 74028 2010803 3.55 2084831 18 76996 2019527 3.67 2096523 19 70692 2012559 3.39 2083251 20 75471 2007790 3.62 2083261 21 70135 2035266 3.33 2105401 22 76136 2020753 3.63 2096889 23 67733 2038268 3.22 2106001 24 76246 2022071 3.63 2098317 25 65540 2026965 3.13 2092505 26 75266 2039480 3.56 2114746 27 65372 2065704 3.07 2131076 28 73007 2063612 3.42 2136619 29 64609 2059181 3.04 2123790 30 73126 2062327 3.42 2135453 31 61891 2051550 2.93 2113441 32 71174 2090284 3.29 2161458 33 61486 2077380 2.87 2138866 34 70627 2047050 3.34 2117677 35 60266 2073289 2.82 2133555 36 70066 2048250 3.31 2118316 37 59586 2022541 2.86 2082127 38 68552 2017021 3.29 2085573 39 60816 2049110 2.88 2109926 40 65852 2023421 3.15 2089273 41 61793 2030892 2.95 2092685 42 68062 2029659 3.24 2097721 43 60294 2004877 2.92 2065171 44 66520 1989146 3.24 2055666 45 61608 1982562 3.01 2044170 46 65417 1970283 3.21 2035700 47 61718 1958343 3.06 2020061 48 64435 1960931 3.18 2025366 49 60600 1920638 3.06 1981238 50 63303 1920897 3.19 1984200 51 61318 1907031 3.12 1968349 52 61886 1890513 3.17 1952399 53 60270 1876990 3.11 1937260 54 62396 1842392 3.28 1904788 55 57980 1834552 3.06 1892532 56 59958 1810497 3.21 1870455 57 58540 1785502 3.17 1844042 58 58759 1756939 3.24 1815698 59 57883 1770493 3.17 1828376 60 58380 1756916 3.22 1815296 61 56719 1735973 3.16 1792692 62 60056 1687839 3.44 1747895 63 55068 1666567 3.20 1721635 64 56783 1625151 3.38 1681934 65 52986 1610248 3.19 1663234 66 56784 1596981 3.43 1653765 67 50802 1560628 3.15 1611430 68 54694 1538774 3.43 1593468 69 51026 1520004 3.25 1571030 70 54362 1496142 3.51 1550504 71 48556 1472133 3.19 1520689 72 52968 1419108 3.60 1472076 73 46315 1393692 3.22 1440007 74 52279 1369124 3.68 1421403 75 45881 1349971 3.29 1395852 76 50058 1323998 3.64 1374056 77 45282 1295225 3.38 1340507 78 48994 1277266 3.69 1326260 79 43785 1253764 3.37 1297549 80 46900 1226549 3.68 1273449 81 42516 1195118 3.44 1237634 82 44726 1162429 3.71 1207155 83 40296 1143917 3.40 1184213 84 44395 1130108 3.78 1174503 85 39159 1110281 3.41 1149440 86 41668 1090902 3.68 1132570 87 38679 1063832 3.51 1102511 88 38654 1020559 3.65 1059213 89 36824 995752 3.57 1032576 90 37824 982995 3.71 1020819 91 35154 951039 3.56 986193 92 35779 933134 3.69 968913 93 34374 916300 3.62 950674 94 34709 888219 3.76 922928 95 32833 877939 3.60 910772 96 32821 850617 3.72 883438 97 30980 826598 3.61 857578 98 31518 808200 3.75 839718 99 30260 795447 3.66 825707 100 29597 771794 3.69 801391 101 28680 755328 3.66 784008 102 28983 731027 3.81 760010 103 27266 709224 3.70 736490 104 27678 694233 3.83 721911 105 26374 676400 3.75 702774 106 26310 656323 3.85 682633 107 24930 638134 3.76 663064 108 25033 624693 3.85 649726 109 23576 615371 3.69 638947 110 23750 592917 3.85 616667 111 22278 581033 3.69 603311 112 22785 565990 3.87 588775 113 21572 546559 3.80 568131 114 22401 539423 3.99 561824 115 19864 523125 3.66 542989 116 20747 507271 3.93 528018 117 19361 495449 3.76 514810 118 19633 479184 3.94 498817 119 18773 469618 3.84 488391 120 18959 459888 3.96 478847 121 17411 441758 3.79 459169 122 17801 431272 3.96 449073 123 16628 421591 3.79 438219 124 17268 405161 4.09 422429 125 15402 394946 3.75 410348 126 16365 383504 4.09 399869 127 15009 375341 3.85 390350 128 15090 366706 3.95 381796 129 14720 357095 3.96 371815 130 14769 345421 4.10 360190 131 13791 335711 3.95 349502 132 14142 329497 4.12 343639 133 13107 321745 3.91 334852 134 13383 313379 4.10 326762 135 12706 301366 4.05 314072 136 12592 293721 4.11 306313 137 12299 286524 4.12 298823 138 12376 277755 4.27 290131 139 11982 270136 4.25 282118 140 11998 263394 4.36 275392 141 11930 256392 4.45 268322 142 12264 249700 4.68 261964 143 12060 241429 4.76 253489 144 10765 227729 4.51 238494 145 7863 116994 6.30 124857 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 17747 13413 56.95 31160 2 17050 11462 59.80 28512 3 19488 10476 65.04 29964 4 20083 9794 67.22 29877 5 19543 8911 68.68 28454 6 22000 7777 73.88 29777 7 25651 7692 76.93 33343 8 24428 7346 76.88 31774 9 19560 7337 72.72 26897 10 19368 7241 72.79 26609 11 19547 6974 73.70 26521 12 17885 7289 71.05 25174 13 18033 6204 74.40 24237 14 18251 6167 74.74 24418 15 17741 5848 75.21 23589 16 17358 5522 75.87 22880 17 16803 5601 75.00 22404 18 17332 5792 74.95 23124 19 15818 5092 75.65 20910 20 14718 4842 75.25 19560 21 15129 4916 75.48 20045 22 14810 4561 76.45 19371 23 14247 4592 75.63 18839 24 13682 4370 75.79 18052 25 13452 4134 76.49 17586 26 12692 4077 75.69 16769 27 12392 3999 75.60 16391 28 12408 3796 76.57 16204 29 12458 3869 76.30 16327 30 12225 3861 76.00 16086 31 11125 3605 75.53 14730 32 11239 3320 77.20 14559 33 10796 3327 76.44 14123 34 10388 2980 77.71 13368 35 10342 3231 76.20 13573 36 9840 3033 76.44 12873 37 9822 2833 77.61 12655 38 9210 2766 76.90 11976 39 9156 2735 77.00 11891 40 8757 2721 76.29 11478 41 8641 2793 75.57 11434 42 8146 2501 76.51 10647 43 8359 2627 76.09 10986 44 8356 2556 76.58 10912 45 8077 2265 78.10 10342 46 7349 2121 77.60 9470 47 7555 2134 77.98 9689 48 7044 2083 77.18 9127 49 7090 2142 76.80 9232 50 6593 1956 77.12 8549 51 6447 2014 76.20 8461 52 6259 1937 76.37 8196 53 6383 2012 76.03 8395 54 6077 1900 76.18 7977 55 5811 1873 75.62 7684 56 5714 1686 77.22 7400 57 5647 1880 75.02 7527 58 5385 1818 74.76 7203 59 5383 1621 76.86 7004 60 5060 1493 77.22 6553 61 5008 1589 75.91 6597 62 4920 1527 76.31 6447 63 4908 1451 77.18 6359 64 4624 1429 76.39 6053 65 4229 1395 75.20 5624 66 4358 1513 74.23 5871 67 4174 1436 74.40 5610 68 4285 1293 76.82 5578 69 4191 1235 77.24 5426 70 4052 1199 77.17 5251 71 3983 1195 76.92 5178 72 3900 1218 76.20 5118 73 3688 1160 76.07 4848 74 3578 1093 76.60 4671 75 3489 1115 75.78 4604 76 3508 1068 76.66 4576 77 3420 1031 76.84 4451 78 3437 1018 77.15 4455 79 3272 970 77.13 4242 80 3243 1006 76.32 4249 81 3008 1003 74.99 4011 82 2937 891 76.72 3828 83 2722 906 75.03 3628 84 2847 873 76.53 3720 85 2739 902 75.23 3641 86 2705 801 77.15 3506 87 2613 879 74.83 3492 88 2626 800 76.65 3426 89 2649 831 76.12 3480 90 2513 771 76.52 3284 91 2382 711 77.01 3093 92 2351 698 77.11 3049 93 2334 706 76.78 3040 94 2198 681 76.35 2879 95 2199 673 76.57 2872 96 2136 636 77.06 2772 97 2129 752 73.90 2881 98 2141 666 76.27 2807 99 2129 654 76.50 2783 100 1867 599 75.71 2466 101 1871 597 75.81 2468 102 1713 554 75.56 2267 103 1742 541 76.30 2283 104 1692 551 75.43 2243 105 1661 525 75.98 2186 106 1644 525 75.80 2169 107 1700 520 76.58 2220 108 1590 509 75.75 2099 109 1391 471 74.70 1862 110 1463 472 75.61 1935 111 1454 433 77.05 1887 112 1319 407 76.42 1726 113 1360 420 76.40 1780 114 1324 435 75.27 1759 115 1279 415 75.50 1694 116 1340 417 76.27 1757 117 1255 342 78.58 1597 118 1098 397 73.44 1495 119 1084 334 76.45 1418 120 1080 358 75.10 1438 121 1086 366 74.79 1452 122 1019 330 75.54 1349 123 1105 321 77.49 1426 124 963 303 76.07 1266 125 977 323 75.15 1300 126 910 318 74.10 1228 127 914 299 75.35 1213 128 848 331 71.93 1179 129 837 299 73.68 1136 130 883 284 75.66 1167 131 866 270 76.23 1136 132 836 263 76.07 1099 133 773 281 73.34 1054 134 845 257 76.68 1102 135 727 260 73.66 987 136 740 235 75.90 975 137 675 212 76.10 887 138 659 224 74.63 883 139 655 212 75.55 867 140 683 191 78.15 874 141 661 234 73.85 895 142 610 218 73.67 828 143 573 199 74.22 772 144 579 213 73.11 792 145 437 98 81.68 535 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 6167 126438 4.65 132605 2 4873 86954 5.31 91827 3 3853 78352 4.69 82205 4 2672 76439 3.38 79111 5 4426 75233 5.56 79659 6 7009 71049 8.98 78058 7 2525 71511 3.41 74036 8 2349 70570 3.22 72919 9 1823 70083 2.54 71906 10 1995 66796 2.90 68791 11 3083 65375 4.50 68458 12 1343 69878 1.89 71221 13 1602 61131 2.55 62733 14 1259 60450 2.04 61709 15 1442 58658 2.40 60100 16 1061 58512 1.78 59573 17 1235 55395 2.18 56630 18 834 55478 1.48 56312 19 872 53570 1.60 54442 20 797 53337 1.47 54134 21 743 52125 1.41 52868 22 742 50157 1.46 50899 23 653 49534 1.30 50187 24 701 47787 1.45 48488 25 603 46541 1.28 47144 26 599 47849 1.24 48448 27 488 44674 1.08 45162 28 581 43044 1.33 43625 29 478 42392 1.11 42870 30 611 42016 1.43 42627 31 435 40690 1.06 41125 32 610 40795 1.47 41405 33 434 39090 1.10 39524 34 548 37656 1.43 38204 35 379 37705 1.00 38084 36 580 37939 1.51 38519 37 370 35313 1.04 35683 38 562 35310 1.57 35872 39 362 33958 1.05 34320 40 572 33234 1.69 33806 41 331 31570 1.04 31901 42 436 32478 1.32 32914 43 328 30364 1.07 30692 44 382 30427 1.24 30809 45 372 29104 1.26 29476 46 337 28991 1.15 29328 47 349 27328 1.26 27677 48 331 27893 1.17 28224 49 384 26173 1.45 26557 50 294 26169 1.11 26463 51 320 24564 1.29 24884 52 288 24617 1.16 24905 53 344 23879 1.42 24223 54 302 23818 1.25 24120 55 328 22929 1.41 23257 56 316 23190 1.34 23506 57 330 21247 1.53 21577 58 289 21106 1.35 21395 59 327 20524 1.57 20851 60 307 20533 1.47 20840 61 285 19581 1.43 19866 62 273 19576 1.38 19849 63 283 18826 1.48 19109 64 264 19144 1.36 19408 65 299 17868 1.65 18167 66 259 17714 1.44 17973 67 307 17069 1.77 17376 68 275 17215 1.57 17490 69 255 16714 1.50 16969 70 257 16031 1.58 16288 71 302 15829 1.87 16131 72 252 15701 1.58 15953 73 255 14636 1.71 14891 74 246 14710 1.64 14956 75 229 14282 1.58 14511 76 280 14231 1.93 14511 77 221 13357 1.63 13578 78 243 13450 1.77 13693 79 203 12696 1.57 12899 80 257 12976 1.94 13233 81 190 12312 1.52 12502 82 243 12287 1.94 12530 83 177 11614 1.50 11791 84 232 11811 1.93 12043 85 175 11009 1.56 11184 86 200 11279 1.74 11479 87 165 10696 1.52 10861 88 186 10774 1.70 10960 89 133 10071 1.30 10204 90 197 9985 1.93 10182 91 148 10123 1.44 10271 92 179 9598 1.83 9777 93 157 9046 1.71 9203 94 156 9004 1.70 9160 95 180 8738 2.02 8918 96 140 8783 1.57 8923 97 170 8529 1.95 8699 98 146 8490 1.69 8636 99 129 8028 1.58 8157 100 145 8239 1.73 8384 101 159 7726 2.02 7885 102 127 7648 1.63 7775 103 152 7003 2.12 7155 104 140 7424 1.85 7564 105 136 6988 1.91 7124 106 120 6729 1.75 6849 107 133 6629 1.97 6762 108 103 6728 1.51 6831 109 101 6470 1.54 6571 110 93 6128 1.49 6221 111 105 5835 1.77 5940 112 100 6105 1.61 6205 113 106 5698 1.83 5804 114 98 5554 1.73 5652 115 80 5542 1.42 5622 116 97 5638 1.69 5735 117 79 5228 1.49 5307 118 79 5245 1.48 5324 119 76 4988 1.50 5064 120 86 4917 1.72 5003 121 92 4881 1.85 4973 122 96 4798 1.96 4894 123 52 4424 1.16 4476 124 70 4692 1.47 4762 125 59 4298 1.35 4357 126 82 4379 1.84 4461 127 65 4132 1.55 4197 128 74 4232 1.72 4306 129 59 3986 1.46 4045 130 69 3839 1.77 3908 131 70 4054 1.70 4124 132 57 3876 1.45 3933 133 49 3526 1.37 3575 134 47 3619 1.28 3666 135 65 3362 1.90 3427 136 70 3446 1.99 3516 137 55 3286 1.65 3341 138 54 3214 1.65 3268 139 53 3221 1.62 3274 140 62 3259 1.87 3321 141 56 3028 1.82 3084 142 58 2984 1.91 3042 143 63 2850 2.16 2913 144 53 2733 1.90 2786 145 35 1216 2.80 1251 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 29038 217478 11.78 246516 2 24158 238061 9.21 262219 3 22820 224203 9.24 247023 4 17469 211334 7.63 228803 5 15244 196078 7.21 211322 6 17386 185459 8.57 202845 7 14836 176137 7.77 190973 8 14257 172613 7.63 186870 9 12953 166784 7.21 179737 10 14414 163282 8.11 177696 11 14754 160241 8.43 174995 12 12115 154505 7.27 166620 13 10745 148450 6.75 159195 14 11871 144902 7.57 156773 15 10822 142885 7.04 153707 16 10967 136591 7.43 147558 17 10192 132784 7.13 142976 18 10554 128849 7.57 139403 19 9583 126788 7.03 136371 20 10112 123714 7.56 133826 21 9144 122330 6.95 131474 22 9764 118424 7.62 128188 23 8433 115608 6.80 124041 24 9589 111840 7.90 121429 25 8071 110961 6.78 119032 26 8967 106383 7.77 115350 27 7848 106604 6.86 114452 28 8566 103395 7.65 111961 29 7443 101084 6.86 108527 30 8366 98206 7.85 106572 31 6793 96748 6.56 103541 32 8127 95984 7.81 104111 33 6575 94085 6.53 100660 34 7929 90160 8.08 98089 35 6085 89283 6.38 95368 36 7779 84839 8.40 92618 37 5897 83339 6.61 89236 38 7153 81179 8.10 88332 39 5951 80345 6.90 86296 40 6930 77475 8.21 84405 41 5884 76505 7.14 82389 42 7170 74295 8.80 81465 43 5578 71393 7.25 76971 44 6904 69034 9.09 75938 45 5568 68682 7.50 74250 46 6751 65543 9.34 72294 47 5567 64818 7.91 70385 48 6406 63937 9.11 70343 49 5369 61989 7.97 67358 50 6301 59652 9.55 65953 51 5306 59831 8.15 65137 52 6080 58225 9.45 64305 53 5133 57299 8.22 62432 54 6048 54554 9.98 60602 55 4726 54090 8.04 58816 56 5528 52164 9.58 57692 57 4882 51356 8.68 56238 58 5333 49413 9.74 54746 59 4747 49678 8.72 54425 60 5326 48063 9.98 53389 61 4520 47165 8.75 51685 62 5222 44734 10.45 49956 63 4352 44040 8.99 48392 64 4946 42976 10.32 47922 65 4042 41963 8.79 46005 66 4848 40610 10.66 45458 67 3926 40712 8.80 44638 68 4707 39314 10.69 44021 69 3976 38603 9.34 42579 70 4489 37533 10.68 42022 71 3750 36473 9.32 40223 72 4326 35490 10.86 39816 73 3619 34854 9.41 38473 74 4278 33706 11.26 37984 75 3433 33778 9.23 37211 76 4003 32341 11.01 36344 77 3349 31910 9.50 35259 78 3898 30871 11.21 34769 79 3216 30209 9.62 33425 80 3678 29386 11.12 33064 81 3157 29202 9.76 32359 82 3627 27916 11.50 31543 83 2932 27650 9.59 30582 84 3491 26874 11.50 30365 85 2789 26147 9.64 28936 86 3280 25818 11.27 29098 87 2724 25512 9.65 28236 88 3060 24414 11.14 27474 89 2651 23939 9.97 26590 90 3001 23085 11.50 26086 91 2459 22580 9.82 25039 92 2772 22300 11.06 25072 93 2303 21989 9.48 24292 94 2732 20830 11.59 23562 95 2193 20736 9.56 22929 96 2519 20094 11.14 22613 97 2148 19784 9.79 21932 98 2444 19090 11.35 21534 99 2119 18777 10.14 20896 100 2287 18620 10.94 20907 101 1849 18150 9.25 19999 102 2265 17614 11.39 19879 103 1774 17388 9.26 19162 104 2094 16670 11.16 18764 105 1742 16761 9.41 18503 106 1946 15828 10.95 17774 107 1651 15869 9.42 17520 108 1857 15227 10.87 17084 109 1608 15077 9.64 16685 110 1817 14582 11.08 16399 111 1531 14242 9.71 15773 112 1701 13916 10.89 15617 113 1432 13819 9.39 15251 114 1697 13293 11.32 14990 115 1403 12985 9.75 14388 116 1521 12557 10.80 14078 117 1383 12626 9.87 14009 118 1462 12201 10.70 13663 119 1354 12202 9.99 13556 120 1440 11996 10.72 13436 121 1233 11570 9.63 12803 122 1361 10944 11.06 12305 123 1202 10821 10.00 12023 124 1328 10397 11.33 11725 125 1068 10375 9.33 11443 126 1257 10208 10.96 11465 127 1035 10074 9.32 11109 128 1173 9651 10.84 10824 129 1109 9704 10.26 10813 130 1083 9199 10.53 10282 131 981 9102 9.73 10083 132 1051 8873 10.59 9924 133 941 8799 9.66 9740 134 1076 8613 11.11 9689 135 872 8261 9.55 9133 136 975 8118 10.72 9093 137 873 8030 9.81 8903 138 930 7687 10.79 8617 139 898 7566 10.61 8464 140 889 7484 10.62 8373 141 840 7261 10.37 8101 142 848 7117 10.65 7965 143 737 6851 9.71 7588 144 779 6198 11.17 6977 145 573 3017 15.96 3590