CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 186822 83098 69.21 269920 2 148235 72844 67.05 221079 3 178564 76988 69.87 255552 4 201587 76566 72.47 278153 5 198452 73005 73.11 271457 6 234372 68701 77.33 303073 7 249441 67691 78.66 317132 8 231817 66516 77.70 298333 9 228050 69661 76.60 297711 10 219671 67591 76.47 287262 11 223351 69897 76.16 293248 12 220991 68017 76.47 289008 13 223750 70828 75.96 294578 14 223949 66658 77.06 290607 15 243463 69940 77.68 313403 16 245076 68737 78.10 313813 17 249671 69310 78.27 318981 18 254649 70780 78.25 325429 19 237080 67999 77.71 305079 20 229655 65392 77.84 295047 21 237439 66318 78.17 303757 22 236586 66572 78.04 303158 23 231495 66200 77.76 297695 24 234848 66733 77.87 301581 25 231964 67242 77.53 299206 26 236288 66660 78.00 302948 27 234379 66022 78.02 300401 28 238951 66748 78.17 305699 29 232402 65344 78.05 297746 30 237736 67136 77.98 304872 31 233413 66501 77.83 299914 32 235283 66045 78.08 301328 33 239250 67461 78.01 306711 34 240418 66530 78.33 306948 35 234680 65890 78.08 300570 36 235362 65745 78.17 301107 37 229359 64870 77.95 294229 38 229663 64098 78.18 293761 39 237582 65767 78.32 303349 40 226821 63756 78.06 290577 41 229981 63971 78.24 293952 42 232715 64294 78.35 297009 43 228366 64145 78.07 292511 44 227127 64419 77.90 291546 45 228121 63567 78.21 291688 46 221486 62123 78.10 283609 47 226104 61931 78.50 288035 48 231158 63748 78.38 294906 49 224590 62564 78.21 287154 50 222790 62455 78.10 285245 51 229903 63147 78.45 293050 52 221180 61056 78.37 282236 53 220644 62202 78.01 282846 54 220681 61219 78.28 281900 55 215733 60697 78.04 276430 56 218374 59829 78.49 278203 57 220535 60885 78.37 281420 58 222186 62347 78.09 284533 59 217138 59390 78.52 276528 60 217503 59820 78.43 277323 61 207345 58566 77.98 265911 62 202516 56806 78.09 259322 63 207234 57941 78.15 265175 64 197619 56820 77.67 254439 65 195376 56321 77.62 251697 66 190769 57238 76.92 248007 67 193083 54307 78.05 247390 68 192442 53867 78.13 246309 69 187212 53562 77.75 240774 70 179365 51777 77.60 231142 71 177403 50621 77.80 228024 72 178904 50980 77.82 229884 73 177644 51296 77.59 228940 74 177457 50156 77.96 227613 75 170013 49174 77.57 219187 76 169748 48572 77.75 218320 77 171277 48773 77.84 220050 78 167863 48218 77.69 216081 79 159565 47167 77.18 206732 80 155190 45710 77.25 200900 81 154617 44758 77.55 199375 82 151316 43517 77.66 194833 83 146882 42718 77.47 189600 84 145584 42968 77.21 188552 85 143297 41805 77.42 185102 86 141719 41691 77.27 183410 87 137662 40092 77.45 177754 88 137271 39688 77.57 176959 89 136065 39660 77.43 175725 90 132618 38355 77.57 170973 91 128231 37646 77.30 165877 92 124587 36870 77.16 161457 93 119893 36660 76.58 156553 94 119177 35699 76.95 154876 95 116457 34901 76.94 151358 96 114630 34543 76.84 149173 97 109883 33457 76.66 143340 98 109856 32691 77.07 142547 99 108257 32423 76.95 140680 100 102719 30693 76.99 133412 101 100679 30296 76.87 130975 102 100362 30160 76.89 130522 103 98389 30247 76.49 128636 104 94396 28866 76.58 123262 105 93324 28156 76.82 121480 106 92336 28123 76.65 120459 107 90097 27241 76.78 117338 108 88959 26701 76.91 115660 109 83275 25989 76.21 109264 110 80260 24990 76.26 105250 111 81106 24680 76.67 105786 112 77910 24656 75.96 102566 113 75167 23792 75.96 98959 114 74974 23103 76.44 98077 115 73347 22732 76.34 96079 116 71362 22719 75.85 94081 117 68495 21625 76.00 90120 118 65152 20932 75.68 86084 119 63539 20112 75.96 83651 120 61444 20036 75.41 81480 121 60516 19271 75.85 79787 122 59126 18454 76.21 77580 123 58153 18712 75.66 76865 124 56633 18504 75.37 75137 125 54879 17882 75.42 72761 126 54134 17163 75.93 71297 127 50489 16946 74.87 67435 128 47758 16415 74.42 64173 129 46768 15956 74.56 62724 130 46998 15964 74.65 62962 131 45932 15431 74.85 61363 132 45051 14962 75.07 60013 133 43038 14798 74.41 57836 134 41849 14414 74.38 56263 135 39914 14193 73.77 54107 136 39927 13794 74.32 53721 137 39381 13481 74.50 52862 138 36799 12965 73.95 49764 139 36550 12878 73.95 49428 140 34390 12580 73.22 46970 141 34370 12551 73.25 46921 142 34170 12526 73.18 46696 143 33318 12024 73.48 45342 144 32224 11207 74.20 43431 145 26695 6083 81.44 32778 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 30794 866812 3.43 897606 2 27665 601110 4.40 628775 3 21032 622717 3.27 643749 4 16339 623865 2.55 640204 5 20420 635500 3.11 655920 6 27881 619580 4.31 647461 7 14321 642383 2.18 656704 8 14797 659081 2.20 673878 9 9977 649551 1.51 659528 10 9761 655643 1.47 665404 11 11671 671969 1.71 683640 12 8682 687178 1.25 695860 13 9639 658607 1.44 668246 14 7986 645569 1.22 653555 15 9171 681504 1.33 690675 16 7977 684054 1.15 692031 17 7436 661821 1.11 669257 18 6479 683515 0.94 689994 19 6637 690752 0.95 697389 20 6189 687261 0.89 693450 21 6177 667214 0.92 673391 22 5973 674160 0.88 680133 23 6131 681998 0.89 688129 24 5730 669921 0.85 675651 25 5627 681504 0.82 687131 26 5834 710167 0.81 716001 27 5457 675248 0.80 680705 28 5758 675323 0.85 681081 29 5403 677641 0.79 683044 30 5769 675343 0.85 681112 31 5159 670889 0.76 676048 32 5838 692310 0.84 698148 33 5325 668093 0.79 673418 34 6022 664786 0.90 670808 35 5256 669458 0.78 674714 36 6006 688167 0.87 694173 37 5289 672172 0.78 677461 38 5726 672697 0.84 678423 39 5617 671732 0.83 677349 40 5994 658702 0.90 664696 41 5656 667195 0.84 672851 42 5845 674246 0.86 680091 43 5881 678565 0.86 684446 44 6028 681872 0.88 687900 45 6150 662888 0.92 669038 46 6216 666717 0.92 672933 47 6208 658395 0.93 664603 48 6491 655979 0.98 662470 49 6583 657423 0.99 664006 50 6574 662497 0.98 669071 51 7153 645633 1.10 652786 52 6907 654422 1.04 661329 53 7291 657733 1.10 665024 54 7044 636528 1.09 643572 55 7442 639557 1.15 646999 56 7278 621719 1.16 628997 57 7890 614495 1.27 622385 58 7656 613639 1.23 621295 59 7839 607528 1.27 615367 60 7596 597586 1.26 605182 61 7837 590241 1.31 598078 62 7696 584943 1.30 592639 63 7935 583719 1.34 591654 64 7887 582668 1.34 590555 65 8375 568192 1.45 576567 66 8036 557945 1.42 565981 67 8318 554911 1.48 563229 68 8592 564867 1.50 573459 69 8315 544106 1.51 552421 70 8567 539080 1.56 547647 71 8491 528877 1.58 537368 72 8694 529048 1.62 537742 73 8526 507890 1.65 516416 74 8749 508800 1.69 517549 75 8536 499799 1.68 508335 76 8795 496983 1.74 505778 77 8430 481709 1.72 490139 78 8740 470477 1.82 479217 79 8476 468192 1.78 476668 80 8980 463290 1.90 472270 81 8567 447689 1.88 456256 82 8555 441163 1.90 449718 83 8500 435000 1.92 443500 84 8723 425016 2.01 433739 85 8769 420970 2.04 429739 86 8508 414948 2.01 423456 87 8445 396856 2.08 405301 88 8140 391368 2.04 399508 89 8042 379814 2.07 387856 90 8134 375870 2.12 384004 91 8291 367700 2.21 375991 92 7962 359273 2.17 367235 93 7832 349127 2.19 356959 94 7644 341134 2.19 348778 95 7772 331902 2.29 339674 96 7624 332551 2.24 340175 97 7268 323047 2.20 330315 98 7532 324660 2.27 332192 99 7508 314440 2.33 321948 100 7383 307314 2.35 314697 101 7438 293355 2.47 300793 102 7354 288743 2.48 296097 103 6985 278400 2.45 285385 104 6896 277375 2.43 284271 105 6641 263097 2.46 269738 106 6622 261900 2.47 268522 107 6755 265284 2.48 272039 108 6593 253010 2.54 259603 109 6456 244686 2.57 251142 110 6202 236873 2.55 243075 111 6033 229225 2.56 235258 112 6129 228367 2.61 234496 113 5847 217371 2.62 223218 114 5845 211615 2.69 217460 115 5632 208598 2.63 214230 116 5487 203103 2.63 208590 117 5544 196717 2.74 202261 118 5462 191898 2.77 197360 119 5288 188925 2.72 194213 120 5157 188133 2.67 193290 121 5127 180164 2.77 185291 122 5079 175868 2.81 180947 123 4902 167243 2.85 172145 124 4817 166032 2.82 170849 125 4757 161513 2.86 166270 126 4730 156894 2.93 161624 127 4534 152466 2.89 157000 128 4388 150255 2.84 154643 129 4302 140674 2.97 144976 130 4130 138466 2.90 142596 131 4166 134289 3.01 138455 132 4039 130301 3.01 134340 133 3858 125945 2.97 129803 134 3812 122512 3.02 126324 135 3658 118115 3.00 121773 136 3657 119147 2.98 122804 137 3632 112109 3.14 115741 138 3517 108606 3.14 112123 139 3518 105920 3.21 109438 140 3744 105271 3.43 109015 141 3725 102075 3.52 105800 142 3827 99880 3.69 103707 143 3989 95066 4.03 99055 144 3647 89958 3.90 93605 145 2924 49435 5.58 52359 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 122826 1544160 7.37 1666986 2 106411 1743458 5.75 1849869 3 98552 1782495 5.24 1881047 4 73481 1709028 4.12 1782509 5 65262 1627937 3.85 1693199 6 62118 1604942 3.73 1667060 7 56643 1571514 3.48 1628157 8 50534 1569031 3.12 1619565 9 49300 1546508 3.09 1595808 10 47640 1560923 2.96 1608563 11 50021 1580947 3.07 1630968 12 41046 1535692 2.60 1576738 13 40677 1516337 2.61 1557014 14 40623 1523395 2.60 1564018 15 42086 1531672 2.67 1573758 16 38660 1532348 2.46 1571008 17 37858 1514252 2.44 1552110 18 36203 1536670 2.30 1572873 19 35692 1533582 2.27 1569274 20 35487 1554435 2.23 1589922 21 34430 1545172 2.18 1579602 22 35000 1561594 2.19 1596594 23 33347 1559737 2.09 1593084 24 34140 1569390 2.13 1603530 25 32113 1565504 2.01 1597617 26 33509 1579626 2.08 1613135 27 31426 1600851 1.93 1632277 28 32659 1592767 2.01 1625426 29 30654 1586559 1.90 1617213 30 32510 1596918 2.00 1629428 31 29331 1590146 1.81 1619477 32 31655 1607199 1.93 1638854 33 29084 1612637 1.77 1641721 34 31210 1583327 1.93 1614537 35 28755 1605451 1.76 1634206 36 31093 1608757 1.90 1639850 37 28226 1584357 1.75 1612583 38 30814 1587504 1.90 1618318 39 29259 1607588 1.79 1636847 40 30100 1594605 1.85 1624705 41 29718 1589306 1.84 1619024 42 31070 1609813 1.89 1640883 43 29785 1586726 1.84 1616511 44 31070 1584496 1.92 1615566 45 30633 1575951 1.91 1606584 46 31022 1569272 1.94 1600294 47 31142 1572361 1.94 1603503 48 31008 1577313 1.93 1608321 49 31682 1553146 2.00 1584828 50 31081 1556017 1.96 1587098 51 32009 1544606 2.03 1576615 52 31284 1539814 1.99 1571098 53 32128 1533093 2.05 1565221 54 32048 1523871 2.06 1555919 55 31952 1505632 2.08 1537584 56 31628 1497580 2.07 1529208 57 32761 1476428 2.17 1509189 58 32110 1464765 2.15 1496875 59 32788 1463825 2.19 1496613 60 32433 1473050 2.15 1505483 61 33267 1441710 2.26 1474977 62 33781 1421759 2.32 1455540 63 33117 1405603 2.30 1438720 64 33180 1376918 2.35 1410098 65 32684 1365109 2.34 1397793 66 33831 1363537 2.42 1397368 67 32642 1331687 2.39 1364329 68 33180 1320324 2.45 1353504 69 33211 1317570 2.46 1350781 70 33893 1297462 2.55 1331355 71 32377 1281529 2.46 1313906 72 33547 1239324 2.64 1272871 73 32033 1216120 2.57 1248153 74 33099 1201033 2.68 1234132 75 32073 1179387 2.65 1211460 76 33736 1162087 2.82 1195823 77 32019 1137163 2.74 1169182 78 32766 1129954 2.82 1162720 79 31567 1118284 2.75 1149851 80 32049 1092945 2.85 1124994 81 31293 1069173 2.84 1100466 82 31765 1039124 2.97 1070889 83 30585 1022842 2.90 1053427 84 31440 1013096 3.01 1044536 85 30449 985783 3.00 1016232 86 30852 970590 3.08 1001442 87 30412 956412 3.08 986824 88 29180 919390 3.08 948570 89 29442 908653 3.14 938095 90 28737 898853 3.10 927590 91 28199 870592 3.14 898791 92 27674 851034 3.15 878708 93 27755 837764 3.21 865519 94 27087 807903 3.24 834990 95 26505 796636 3.22 823141 96 25732 779254 3.20 804986 97 25725 764152 3.26 789877 98 25231 741965 3.29 767196 99 24860 728657 3.30 753517 100 24259 707034 3.32 731293 101 24090 692247 3.36 716337 102 23946 674712 3.43 698658 103 22839 654648 3.37 677487 104 23038 640652 3.47 663690 105 22109 626442 3.41 648551 106 21682 612414 3.42 634096 107 21466 597774 3.47 619240 108 21323 579528 3.55 600851 109 20550 570797 3.48 591347 110 20304 555065 3.53 575369 111 19820 543420 3.52 563240 112 19855 529315 3.62 549170 113 19091 515462 3.57 534553 114 19343 504055 3.70 523398 115 18242 487934 3.60 506176 116 18385 474865 3.73 493250 117 18078 464102 3.75 482180 118 17644 451774 3.76 469418 119 17211 445588 3.72 462799 120 16876 437021 3.72 453897 121 16269 417070 3.75 433339 122 15899 406287 3.77 422186 123 15758 398573 3.80 414331 124 15360 384506 3.84 399866 125 15033 375988 3.84 391021 126 14873 366293 3.90 381166 127 14307 354800 3.88 369107 128 14090 347299 3.90 361389 129 14327 338147 4.06 352474 130 13461 327537 3.95 340998 131 13364 316833 4.05 330197 132 13149 311271 4.05 324420 133 12757 307603 3.98 320360 134 12465 298218 4.01 310683 135 12243 286341 4.10 298584 136 11976 278818 4.12 290794 137 11766 270888 4.16 282654 138 11715 263801 4.25 275516 139 11534 257218 4.29 268752 140 11564 249964 4.42 261528 141 11375 243124 4.47 254499 142 11697 237589 4.69 249286 143 11873 230440 4.90 242313 144 10961 218140 4.78 229101 145 7974 118097 6.33 126071 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 23038 15893 59.18 38931 2 16893 13756 55.12 30649 3 20845 11708 64.03 32553 4 21730 12044 64.34 33774 5 20439 10194 66.72 30633 6 27550 8316 76.81 35866 7 34542 7863 81.46 42405 8 28312 8064 77.83 36376 9 19238 8618 69.06 27856 10 18451 8377 68.78 26828 11 18656 8108 69.71 26764 12 17012 9159 65.00 26171 13 17793 6855 72.19 24648 14 17108 6394 72.79 23502 15 17938 6397 73.71 24335 16 17911 5927 75.14 23838 17 18007 5962 75.13 23969 18 17332 5855 74.75 23187 19 15372 5583 73.36 20955 20 14657 4981 74.64 19638 21 14692 4863 75.13 19555 22 14406 4912 74.57 19318 23 14002 4567 75.41 18569 24 13532 4479 75.13 18011 25 13029 4510 74.29 17539 26 12488 4145 75.08 16633 27 12449 4164 74.94 16613 28 12180 3809 76.18 15989 29 11878 3860 75.47 15738 30 11972 3742 76.19 15714 31 11236 3719 75.13 14955 32 11079 3337 76.85 14416 33 10478 3084 77.26 13562 34 9895 3092 76.19 12987 35 9935 3203 75.62 13138 36 9579 2942 76.50 12521 37 9010 2759 76.56 11769 38 8967 2569 77.73 11536 39 9062 2679 77.18 11741 40 8138 2527 76.31 10665 41 8067 2484 76.46 10551 42 7779 2274 77.38 10053 43 7790 2361 76.74 10151 44 7703 2247 77.42 9950 45 7173 2232 76.27 9405 46 6934 2099 76.76 9033 47 6891 1985 77.64 8876 48 6788 1934 77.83 8722 49 6604 1934 77.35 8538 50 6134 1934 76.03 8068 51 6032 1839 76.64 7871 52 5912 1789 76.77 7701 53 5835 1829 76.14 7664 54 5795 1776 76.54 7571 55 5452 1566 77.69 7018 56 5293 1622 76.54 6915 57 5054 1510 77.00 6564 58 4910 1506 76.53 6416 59 4946 1464 77.16 6410 60 4681 1375 77.30 6056 61 4608 1352 77.32 5960 62 4508 1345 77.02 5853 63 4425 1379 76.24 5804 64 4016 1257 76.16 5273 65 3966 1233 76.28 5199 66 3882 1273 75.31 5155 67 3892 1164 76.98 5056 68 3734 1173 76.10 4907 69 3654 1129 76.40 4783 70 3488 1092 76.16 4580 71 3321 1017 76.56 4338 72 3516 1090 76.34 4606 73 3229 1037 75.69 4266 74 3098 1019 75.25 4117 75 3023 949 76.11 3972 76 2893 929 75.69 3822 77 2929 926 75.98 3855 78 2850 890 76.20 3740 79 2745 890 75.52 3635 80 2844 814 77.75 3658 81 2574 804 76.20 3378 82 2451 758 76.38 3209 83 2420 757 76.17 3177 84 2426 715 77.24 3141 85 2418 714 77.20 3132 86 2331 732 76.10 3063 87 2234 693 76.32 2927 88 2283 733 75.70 3016 89 2224 677 76.66 2901 90 2095 664 75.93 2759 91 2019 597 77.18 2616 92 2038 600 77.26 2638 93 1902 588 76.39 2490 94 1803 637 73.89 2440 95 1794 542 76.80 2336 96 1796 648 73.49 2444 97 1821 626 74.42 2447 98 1818 520 77.76 2338 99 1649 576 74.11 2225 100 1599 456 77.81 2055 101 1485 484 75.42 1969 102 1449 400 78.37 1849 103 1506 471 76.18 1977 104 1389 430 76.36 1819 105 1406 424 76.83 1830 106 1353 454 74.88 1807 107 1419 428 76.83 1847 108 1283 456 73.78 1739 109 1211 392 75.55 1603 110 1155 396 74.47 1551 111 1144 362 75.96 1506 112 1144 376 75.26 1520 113 1129 331 77.33 1460 114 1103 348 76.02 1451 115 1015 341 74.85 1356 116 1027 341 75.07 1368 117 1003 344 74.46 1347 118 932 284 76.64 1216 119 951 308 75.54 1259 120 842 322 72.34 1164 121 946 291 76.48 1237 122 857 245 77.77 1102 123 838 264 76.04 1102 124 795 298 72.74 1093 125 804 272 74.72 1076 126 789 259 75.29 1048 127 761 245 75.65 1006 128 770 245 75.86 1015 129 758 231 76.64 989 130 700 258 73.07 958 131 707 264 72.81 971 132 652 208 75.81 860 133 629 255 71.15 884 134 644 209 75.50 853 135 578 207 73.63 785 136 560 167 77.03 727 137 527 177 74.86 704 138 557 193 74.27 750 139 541 193 73.71 734 140 493 169 74.47 662 141 498 182 73.24 680 142 488 177 73.38 665 143 465 184 71.65 649 144 436 146 74.91 582 145 369 72 83.67 441 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 10948 111024 8.98 121972 2 9649 76957 11.14 86606 3 7527 71334 9.54 78861 4 5335 69336 7.14 74671 5 10579 70344 13.07 80923 6 16849 63485 20.97 80334 7 4808 63687 7.02 68495 8 4767 67380 6.61 72147 9 2415 71799 3.25 74214 10 3576 60956 5.54 64532 11 5323 59535 8.21 64858 12 1778 64213 2.69 65991 13 1875 55511 3.27 57386 14 1688 53548 3.06 55236 15 1653 53090 3.02 54743 16 1331 52232 2.48 53563 17 1266 49654 2.49 50920 18 1026 50407 1.99 51433 19 974 48151 1.98 49125 20 938 47845 1.92 48783 21 952 46331 2.01 47283 22 933 44445 2.06 45378 23 828 44147 1.84 44975 24 694 42577 1.60 43271 25 587 41949 1.38 42536 26 593 42720 1.37 43313 27 563 40639 1.37 41202 28 556 38732 1.42 39288 29 425 38431 1.09 38856 30 508 37579 1.33 38087 31 414 35964 1.14 36378 32 431 36519 1.17 36950 33 350 34209 1.01 34559 34 425 33241 1.26 33666 35 301 32870 0.91 33171 36 377 33105 1.13 33482 37 348 31327 1.10 31675 38 326 30945 1.04 31271 39 274 29864 0.91 30138 40 366 28798 1.25 29164 41 269 27750 0.96 28019 42 314 28731 1.08 29045 43 243 26734 0.90 26977 44 269 27046 0.98 27315 45 254 25946 0.97 26200 46 260 25037 1.03 25297 47 270 23870 1.12 24140 48 242 24290 0.99 24532 49 230 22463 1.01 22693 50 220 22395 0.97 22615 51 240 21446 1.11 21686 52 213 20816 1.01 21029 53 256 20576 1.23 20832 54 222 20192 1.09 20414 55 218 19825 1.09 20043 56 222 19094 1.15 19316 57 242 17957 1.33 18199 58 202 17974 1.11 18176 59 204 17617 1.14 17821 60 222 17088 1.28 17310 61 221 16207 1.35 16428 62 186 16426 1.12 16612 63 214 16025 1.32 16239 64 201 15995 1.24 16196 65 193 14840 1.28 15033 66 193 14399 1.32 14592 67 195 14163 1.36 14358 68 212 14453 1.45 14665 69 183 13718 1.32 13901 70 170 13275 1.26 13445 71 218 13040 1.64 13258 72 188 12673 1.46 12861 73 195 12479 1.54 12674 74 191 12094 1.55 12285 75 183 11816 1.53 11999 76 202 11418 1.74 11620 77 162 11177 1.43 11339 78 194 10678 1.78 10872 79 162 10340 1.54 10502 80 184 10472 1.73 10656 81 133 10075 1.30 10208 82 190 10009 1.86 10199 83 157 9650 1.60 9807 84 160 9542 1.65 9702 85 134 9096 1.45 9230 86 146 9144 1.57 9290 87 121 8658 1.38 8779 88 139 8704 1.57 8843 89 108 8124 1.31 8232 90 135 8117 1.64 8252 91 117 8362 1.38 8479 92 129 7583 1.67 7712 93 127 7236 1.72 7363 94 104 7202 1.42 7306 95 144 7159 1.97 7303 96 101 6898 1.44 6999 97 108 6702 1.59 6810 98 117 6449 1.78 6566 99 119 6564 1.78 6683 100 101 6370 1.56 6471 101 105 6024 1.71 6129 102 107 6008 1.75 6115 103 99 5707 1.71 5806 104 95 5699 1.64 5794 105 95 5444 1.72 5539 106 116 5481 2.07 5597 107 90 5372 1.65 5462 108 75 5181 1.43 5256 109 99 4914 1.97 5013 110 78 4932 1.56 5010 111 70 4809 1.43 4879 112 76 4604 1.62 4680 113 79 4517 1.72 4596 114 84 4429 1.86 4513 115 67 4137 1.59 4204 116 91 4178 2.13 4269 117 56 4248 1.30 4304 118 79 4053 1.91 4132 119 66 3789 1.71 3855 120 51 3834 1.31 3885 121 59 3641 1.59 3700 122 61 3654 1.64 3715 123 58 3573 1.60 3631 124 60 3493 1.69 3553 125 52 3334 1.54 3386 126 64 3301 1.90 3365 127 50 3099 1.59 3149 128 56 3176 1.73 3232 129 53 3029 1.72 3082 130 45 3033 1.46 3078 131 52 2928 1.74 2980 132 38 2828 1.33 2866 133 51 2808 1.78 2859 134 44 2666 1.62 2710 135 45 2527 1.75 2572 136 43 2720 1.56 2763 137 45 2427 1.82 2472 138 42 2471 1.67 2513 139 41 2407 1.67 2448 140 37 2404 1.52 2441 141 33 2355 1.38 2388 142 38 2259 1.65 2297 143 40 2164 1.81 2204 144 24 1931 1.23 1955 145 19 959 1.94 978 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 45269 204237 18.14 249506 2 29225 226976 11.41 256201 3 31400 212201 12.89 243601 4 14165 208138 6.37 222303 5 13165 186916 6.58 200081 6 15118 167155 8.29 182273 7 14599 155465 8.58 170064 8 10381 156484 6.22 166865 9 9477 154868 5.77 164345 10 12752 154898 7.61 167650 11 16665 146347 10.22 163012 12 7729 144453 5.08 152182 13 7324 132511 5.24 139835 14 7480 128807 5.49 136287 15 7243 127390 5.38 134633 16 6618 122972 5.11 129590 17 5932 120142 4.71 126074 18 5925 118152 4.78 124077 19 5344 115736 4.41 121080 20 5342 114584 4.45 119926 21 4719 111065 4.08 115784 22 4752 108407 4.20 113159 23 4180 105547 3.81 109727 24 4459 103712 4.12 108171 25 3925 101208 3.73 105133 26 4108 98264 4.01 102372 27 3671 97954 3.61 101625 28 3895 93902 3.98 97797 29 3284 92009 3.45 95293 30 3589 89858 3.84 93447 31 2891 87305 3.21 90196 32 3316 86362 3.70 89678 33 2850 84313 3.27 87163 34 3032 81509 3.59 84541 35 2549 79517 3.11 82066 36 2862 77119 3.58 79981 37 2537 74442 3.30 76979 38 2745 73281 3.61 76026 39 2438 71910 3.28 74348 40 2597 68944 3.63 71541 41 2344 67392 3.36 69736 42 2625 66846 3.78 69471 43 2321 64312 3.48 66633 44 2516 61895 3.91 64411 45 2334 60843 3.69 63177 46 2353 59198 3.82 61551 47 2342 57400 3.92 59742 48 2308 55251 4.01 57559 49 2208 54569 3.89 56777 50 2259 52907 4.09 55166 51 2129 52299 3.91 54428 52 2137 50867 4.03 53004 53 2015 49411 3.92 51426 54 2177 47807 4.36 49984 55 1941 46961 3.97 48902 56 2039 45419 4.30 47458 57 1907 44599 4.10 46506 58 2003 43262 4.43 45265 59 1902 42679 4.27 44581 60 1935 41756 4.43 43691 61 1737 40521 4.11 42258 62 1936 38587 4.78 40523 63 1712 38117 4.30 39829 64 1891 36888 4.88 38779 65 1655 35660 4.44 37315 66 1875 34783 5.11 36658 67 1597 34235 4.46 35832 68 1798 33609 5.08 35407 69 1623 33112 4.67 34735 70 1688 32150 4.99 33838 71 1493 30626 4.65 32119 72 1680 29927 5.32 31607 73 1430 29305 4.65 30735 74 1668 28342 5.56 30010 75 1456 28108 4.92 29564 76 1497 27379 5.18 28876 77 1391 26768 4.94 28159 78 1484 25941 5.41 27425 79 1320 25298 4.96 26618 80 1362 24630 5.24 25992 81 1268 24028 5.01 25296 82 1380 23239 5.61 24619 83 1193 23084 4.91 24277 84 1326 22267 5.62 23593 85 1225 21639 5.36 22864 86 1247 21004 5.60 22251 87 1166 20900 5.28 22066 88 1140 19996 5.39 21136 89 1114 19516 5.40 20630 90 1155 18891 5.76 20046 91 1029 18809 5.19 19838 92 1071 18275 5.54 19346 93 1023 17966 5.39 18989 94 1077 17163 5.90 18240 95 939 16963 5.25 17902 96 1021 16431 5.85 17452 97 985 16043 5.78 17028 98 945 15542 5.73 16487 99 887 15320 5.47 16207 100 894 14955 5.64 15849 101 796 14557 5.18 15353 102 924 14393 6.03 15317 103 817 14010 5.51 14827 104 806 13447 5.65 14253 105 767 13224 5.48 13991 106 730 13147 5.26 13877 107 708 12557 5.34 13265 108 739 12027 5.79 12766 109 675 12105 5.28 12780 110 705 11803 5.64 12508 111 642 11238 5.40 11880 112 623 11181 5.28 11804 113 603 10852 5.26 11455 114 696 10708 6.10 11404 115 582 10195 5.40 10777 116 621 9956 5.87 10577 117 556 9613 5.47 10169 118 591 9525 5.84 10116 119 562 9260 5.72 9822 120 549 9165 5.65 9714 121 515 8942 5.45 9457 122 541 8617 5.91 9158 123 475 8558 5.26 9033 124 481 8299 5.48 8780 125 470 8217 5.41 8687 126 473 7836 5.69 8309 127 416 7770 5.08 8186 128 430 7505 5.42 7935 129 399 7499 5.05 7898 130 418 7112 5.55 7530 131 363 7102 4.86 7465 132 404 6861 5.56 7265 133 397 6645 5.64 7042 134 363 6521 5.27 6884 135 390 6452 5.70 6842 136 328 6301 4.95 6629 137 373 6116 5.75 6489 138 295 5730 4.90 6025 139 340 5933 5.42 6273 140 342 5634 5.72 5976 141 315 5551 5.37 5866 142 291 5489 5.03 5780 143 295 5226 5.34 5521 144 281 4867 5.46 5148 145 213 2394 8.17 2607