CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 158575 87167 64.53 245742 2 154499 79623 65.99 234122 3 173761 81653 68.03 255414 4 187482 79025 70.35 266507 5 188450 75835 71.31 264285 6 211216 74583 73.90 285799 7 222915 74544 74.94 297459 8 220472 72670 75.21 293142 9 218728 74484 74.60 293212 10 209895 72610 74.30 282505 11 216832 72789 74.87 289621 12 213929 71211 75.03 285140 13 216555 73862 74.57 290417 14 218438 71766 75.27 290204 15 228445 74978 75.29 303423 16 228226 72803 75.82 301029 17 231404 73927 75.79 305331 18 232899 74870 75.67 307769 19 230086 73338 75.83 303424 20 220256 70352 75.79 290608 21 231832 73660 75.89 305492 22 229027 72256 76.02 301283 23 227451 72807 75.75 300258 24 225699 72895 75.59 298594 25 227952 73093 75.72 301045 26 223291 71605 75.72 294896 27 220957 71081 75.66 292038 28 232858 72821 76.18 305679 29 228600 70996 76.30 299596 30 232478 72390 76.26 304868 31 226307 71340 76.03 297647 32 230698 71565 76.32 302263 33 231293 71983 76.26 303276 34 232161 71931 76.35 304092 35 228572 72265 75.98 300837 36 227642 71234 76.17 298876 37 227269 71044 76.18 298313 38 228781 70636 76.41 299417 39 227673 70133 76.45 297806 40 220390 69284 76.08 289674 41 226218 70384 76.27 296602 42 221505 69483 76.12 290988 43 223514 70360 76.06 293874 44 221137 69122 76.19 290259 45 220325 68681 76.24 289006 46 216156 67827 76.12 283983 47 221248 67339 76.67 288587 48 220050 68026 76.39 288076 49 218678 68384 76.18 287062 50 211890 67022 75.97 278912 51 216204 67617 76.18 283821 52 212342 66678 76.10 279020 53 215358 67274 76.20 282632 54 213741 66598 76.24 280339 55 211106 66883 75.94 277989 56 209526 64886 76.35 274412 57 211091 65920 76.20 277011 58 210490 66760 75.92 277250 59 202715 63760 76.07 266475 60 201310 63841 75.92 265151 61 200502 63108 76.06 263610 62 193597 62396 75.63 255993 63 198922 62599 76.06 261521 64 190287 61093 75.70 251380 65 187930 60708 75.58 248638 66 182401 60769 75.01 243170 67 183793 58841 75.75 242634 68 187296 59208 75.98 246504 69 184251 58989 75.75 243240 70 176233 56727 75.65 232960 71 174384 55899 75.73 230283 72 176541 56736 75.68 233277 73 173674 56213 75.55 229887 74 172578 54682 75.94 227260 75 171011 54338 75.89 225349 76 167969 53482 75.85 221451 77 169726 53296 76.10 223022 78 163948 52299 75.82 216247 79 160094 51903 75.52 211997 80 158239 51193 75.56 209432 81 151030 49063 75.48 200093 82 149063 48330 75.52 197393 83 146521 48323 75.20 194844 84 146440 47827 75.38 194267 85 144509 46751 75.56 191260 86 144032 46061 75.77 190093 87 141036 45076 75.78 186112 88 139721 44563 75.82 184284 89 139652 44893 75.67 184545 90 133889 43914 75.30 177803 91 129667 42667 75.24 172334 92 127475 41930 75.25 169405 93 123507 41173 75.00 164680 94 125172 40863 75.39 166035 95 122702 40087 75.37 162789 96 121163 39615 75.36 160778 97 118387 39113 75.17 157500 98 115704 37958 75.30 153662 99 112405 37696 74.89 150101 100 108693 36367 74.93 145060 101 106980 35712 74.97 142692 102 106878 35667 74.98 142545 103 105858 35389 74.95 141247 104 102173 34376 74.83 136549 105 100895 34216 74.68 135111 106 99985 33211 75.07 133196 107 97481 32638 74.92 130119 108 95789 32109 74.89 127898 109 91357 31126 74.59 122483 110 88040 30516 74.26 118556 111 88208 30050 74.59 118258 112 87232 29339 74.83 116571 113 83624 28715 74.44 112339 114 82115 28785 74.04 110900 115 81800 28173 74.38 109973 116 79381 27204 74.48 106585 117 76833 26627 74.26 103460 118 73491 25702 74.09 99193 119 72465 25432 74.02 97897 120 70405 24764 73.98 95169 121 68566 24658 73.55 93224 122 68605 23926 74.14 92531 123 67563 23663 74.06 91226 124 66279 23458 73.86 89737 125 63664 22865 73.58 86529 126 62419 22176 73.79 84595 127 59497 21581 73.38 81078 128 57459 21253 73.00 78712 129 57187 20718 73.41 77905 130 56408 20709 73.15 77117 131 56799 20598 73.39 77397 132 55207 19896 73.51 75103 133 53081 19620 73.01 72701 134 50937 19348 72.47 70285 135 49563 18320 73.01 67883 136 48872 17829 73.27 66701 137 47337 17806 72.67 65143 138 46232 17573 72.46 63805 139 45617 17231 72.58 62848 140 44530 17015 72.35 61545 141 43431 16994 71.88 60425 142 43281 16845 71.98 60126 143 42119 16407 71.97 58526 144 41555 15574 72.74 57129 145 34613 7709 81.78 42322 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 23465 1044356 2.20 1067821 2 20470 707208 2.81 727678 3 16393 680481 2.35 696874 4 11778 689123 1.68 700901 5 13403 686934 1.91 700337 6 16480 688294 2.34 704774 7 9808 696777 1.39 706585 8 9374 704244 1.31 713618 9 8515 688493 1.22 697008 10 8189 709798 1.14 717987 11 9547 726452 1.30 735999 12 7337 739600 0.98 746937 13 8361 716577 1.15 724938 14 6918 708523 0.97 715441 15 7779 725822 1.06 733601 16 6709 736758 0.90 743467 17 6667 707880 0.93 714547 18 6041 727986 0.82 734027 19 6056 729923 0.82 735979 20 5751 745862 0.77 751613 21 5582 727510 0.76 733092 22 5740 728501 0.78 734241 23 5384 729867 0.73 735251 24 5381 726538 0.74 731919 25 5073 724129 0.70 729202 26 5404 752118 0.71 757522 27 4712 713480 0.66 718192 28 5157 720836 0.71 725993 29 4853 729029 0.66 733882 30 5153 725018 0.71 730171 31 4739 716169 0.66 720908 32 5497 732466 0.74 737963 33 4824 722829 0.66 727653 34 5599 722747 0.77 728346 35 4691 718793 0.65 723484 36 5528 738393 0.74 743921 37 4722 720743 0.65 725465 38 5419 724400 0.74 729819 39 4812 715006 0.67 719818 40 5396 715318 0.75 720714 41 4822 717511 0.67 722333 42 5326 728062 0.73 733388 43 5095 732051 0.69 737146 44 5363 729903 0.73 735266 45 5277 717134 0.73 722411 46 5394 718190 0.75 723584 47 5387 703553 0.76 708940 48 5421 706834 0.76 712255 49 5843 705445 0.82 711288 50 5515 710645 0.77 716160 51 5896 688967 0.85 694863 52 5520 694697 0.79 700217 53 5970 694182 0.85 700152 54 5618 681894 0.82 687512 55 6108 674767 0.90 680875 56 5621 669740 0.83 675361 57 6468 655049 0.98 661517 58 6122 666084 0.91 672206 59 6513 656661 0.98 663174 60 6002 654363 0.91 660365 61 6399 638462 0.99 644861 62 5888 635843 0.92 641731 63 6091 631537 0.96 637628 64 6063 630617 0.95 636680 65 6293 619986 1.00 626279 66 6309 614697 1.02 621006 67 6183 604767 1.01 610950 68 6408 613204 1.03 619612 69 6288 597716 1.04 604004 70 6512 597111 1.08 603623 71 6414 581858 1.09 588272 72 6666 580367 1.14 587033 73 6543 565281 1.14 571824 74 6478 570575 1.12 577053 75 6381 559266 1.13 565647 76 6670 552423 1.19 559093 77 6300 541355 1.15 547655 78 6635 532335 1.23 538970 79 6269 526353 1.18 532622 80 6640 529325 1.24 535965 81 6368 512007 1.23 518375 82 6485 505726 1.27 512211 83 6226 496306 1.24 502532 84 6490 488596 1.31 495086 85 6240 478981 1.29 485221 86 6218 475776 1.29 481994 87 6074 461544 1.30 467618 88 6016 459602 1.29 465618 89 5968 442102 1.33 448070 90 5960 440885 1.33 446845 91 6031 434933 1.37 440964 92 6075 428263 1.40 434338 93 5946 416642 1.41 422588 94 5617 407020 1.36 412637 95 5842 401527 1.43 407369 96 5700 403746 1.39 409446 97 5782 393533 1.45 399315 98 5723 386584 1.46 392307 99 5746 383895 1.47 389641 100 5697 375816 1.49 381513 101 5495 359883 1.50 365378 102 5499 360180 1.50 365679 103 5585 346415 1.59 352000 104 5431 351354 1.52 356785 105 5347 333866 1.58 339213 106 5067 331511 1.51 336578 107 5085 327334 1.53 332419 108 5137 321067 1.57 326204 109 5014 312229 1.58 317243 110 4934 304255 1.60 309189 111 4860 296464 1.61 301324 112 4820 296774 1.60 301594 113 4829 284939 1.67 289768 114 4762 280151 1.67 284913 115 4497 276436 1.60 280933 116 4584 274044 1.65 278628 117 4447 263785 1.66 268232 118 4599 258577 1.75 263176 119 4379 254633 1.69 259012 120 4434 253655 1.72 258089 121 4373 244601 1.76 248974 122 4340 241056 1.77 245396 123 4196 231481 1.78 235677 124 4334 229874 1.85 234208 125 4142 223473 1.82 227615 126 4279 219855 1.91 224134 127 4007 214521 1.83 218528 128 3950 208483 1.86 212433 129 3710 201657 1.81 205367 130 3677 198716 1.82 202393 131 3619 194701 1.82 198320 132 3600 191772 1.84 195372 133 3734 182730 2.00 186464 134 3632 178247 2.00 181879 135 3547 173866 2.00 177413 136 3420 175655 1.91 179075 137 3494 168205 2.03 171699 138 3426 163761 2.05 167187 139 3542 160615 2.16 164157 140 3705 158971 2.28 162676 141 3763 156884 2.34 160647 142 3908 153677 2.48 157585 143 4028 147580 2.66 151608 144 3884 140233 2.70 144117 145 3066 73791 3.99 76857 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 105246 1839477 5.41 1944723 2 97777 2079256 4.49 2177033 3 88713 2056641 4.14 2145354 4 74624 1976492 3.64 2051116 5 67000 1900603 3.41 1967603 6 64211 1884641 3.29 1948852 7 58101 1840324 3.06 1898425 8 54483 1835330 2.88 1889813 9 53942 1794729 2.92 1848671 10 51141 1800669 2.76 1851810 11 51033 1826951 2.72 1877984 12 47124 1783436 2.57 1830560 13 44617 1762332 2.47 1806949 14 46015 1776994 2.52 1823009 15 45848 1768972 2.53 1814820 16 44422 1763253 2.46 1807675 17 43240 1740969 2.42 1784209 18 43760 1743056 2.45 1786816 19 40890 1733232 2.30 1774122 20 42269 1727664 2.39 1769933 21 39801 1757547 2.21 1797348 22 42295 1741711 2.37 1784006 23 38306 1756233 2.13 1794539 24 42014 1743555 2.35 1785569 25 36709 1747905 2.06 1784614 26 41662 1759257 2.31 1800919 27 36453 1784054 2.00 1820507 28 40356 1776561 2.22 1816917 29 35553 1771485 1.97 1807038 30 40405 1786307 2.21 1826712 31 33530 1777093 1.85 1810623 32 39137 1808913 2.12 1848050 33 33841 1799319 1.85 1833160 34 38639 1784453 2.12 1823092 35 33249 1796859 1.82 1830108 36 38241 1778424 2.11 1816665 37 32941 1761995 1.84 1794936 38 37843 1765619 2.10 1803462 39 33963 1786197 1.87 1820160 40 36754 1770497 2.03 1807251 41 34389 1778191 1.90 1812580 42 38075 1777795 2.10 1815870 43 34058 1764547 1.89 1798605 44 37394 1762159 2.08 1799553 45 35426 1754597 1.98 1790023 46 36853 1745424 2.07 1782277 47 36032 1743003 2.03 1779035 48 36630 1750715 2.05 1787345 49 36088 1723866 2.05 1759954 50 36871 1725497 2.09 1762368 51 36360 1718805 2.07 1755165 52 36321 1713680 2.08 1750001 53 36284 1703777 2.09 1740061 54 37056 1684186 2.15 1721242 55 35408 1682425 2.06 1717833 56 36462 1667198 2.14 1703660 57 35840 1658961 2.11 1694801 58 35954 1636151 2.15 1672105 59 35725 1651088 2.12 1686813 60 36156 1645471 2.15 1681627 61 35417 1625515 2.13 1660932 62 37653 1594434 2.31 1632087 63 35462 1585560 2.19 1621022 64 36775 1559232 2.30 1596007 65 34463 1552816 2.17 1587279 66 37342 1547218 2.36 1584560 67 33333 1521234 2.14 1554567 68 36433 1508237 2.36 1544670 69 34179 1498617 2.23 1532796 70 36376 1475021 2.41 1511397 71 33235 1458309 2.23 1491544 72 36284 1428416 2.48 1464700 73 32262 1406937 2.24 1439199 74 36249 1391832 2.54 1428081 75 32151 1378705 2.28 1410856 76 35148 1361754 2.52 1396902 77 32313 1339191 2.36 1371504 78 35078 1323421 2.58 1358499 79 31907 1309361 2.38 1341268 80 33825 1291255 2.55 1325080 81 31478 1262951 2.43 1294429 82 33511 1234187 2.64 1267698 83 30331 1227817 2.41 1258148 84 33166 1216510 2.65 1249676 85 30187 1199682 2.45 1229869 86 32174 1184756 2.64 1216930 87 30210 1167257 2.52 1197467 88 30395 1131406 2.62 1161801 89 29707 1108579 2.61 1138286 90 29845 1097069 2.65 1126914 91 28382 1073445 2.58 1101827 92 29135 1058924 2.68 1088059 93 28566 1044028 2.66 1072594 94 28444 1020343 2.71 1048787 95 27470 1011244 2.64 1038714 96 27470 986927 2.71 1014397 97 26043 970741 2.61 996784 98 26819 953428 2.74 980247 99 26149 941425 2.70 967574 100 25846 922842 2.72 948688 101 25332 905998 2.72 931330 102 25720 886108 2.82 911828 103 24066 865497 2.71 889563 104 24611 850846 2.81 875457 105 23458 833149 2.74 856607 106 23754 816083 2.83 839837 107 22646 800702 2.75 823348 108 22989 786494 2.84 809483 109 21831 779074 2.73 800905 110 22358 756122 2.87 778480 111 21146 745121 2.76 766267 112 21586 730959 2.87 752545 113 20358 710790 2.78 731148 114 21743 702864 3.00 724607 115 19391 685875 2.75 705266 116 20583 673024 2.97 693607 117 19046 657798 2.81 676844 118 19532 643088 2.95 662620 119 18609 636548 2.84 655157 120 19002 626414 2.94 645416 121 17826 607820 2.85 625646 122 18354 593986 3.00 612340 123 17625 583845 2.93 601470 124 17863 566983 3.05 584846 125 16476 556696 2.87 573172 126 17028 544300 3.03 561328 127 15949 534789 2.90 550738 128 16243 525552 3.00 541795 129 15913 515599 2.99 531512 130 16040 503040 3.09 519080 131 15165 490716 3.00 505881 132 15516 483814 3.11 499330 133 14749 475649 3.01 490398 134 15021 464874 3.13 479895 135 14219 451238 3.05 465457 136 14365 442114 3.15 456479 137 14253 432830 3.19 447083 138 14270 423105 3.26 437375 139 14008 415165 3.26 429173 140 14229 407344 3.38 421573 141 14116 396918 3.43 411034 142 14588 389630 3.61 404218 143 14397 380135 3.65 394532 144 13300 360011 3.56 373311 145 9671 186228 4.94 195899 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 23166 18422 55.70 41588 2 22538 16174 58.22 38712 3 25182 15162 62.42 40344 4 26457 14294 64.92 40751 5 25895 12918 66.72 38813 6 28592 12008 70.42 40600 7 30843 11815 72.30 42658 8 30196 11187 72.97 41383 9 26861 11112 70.74 37973 10 26567 10770 71.15 37337 11 26975 10878 71.26 37853 12 25665 10438 71.09 36103 13 25273 9757 72.15 35030 14 25796 9613 72.85 35409 15 25212 9370 72.90 34582 16 24212 9042 72.81 33254 17 23797 9103 72.33 32900 18 24274 8873 73.23 33147 19 23198 8366 73.50 31564 20 21647 7872 73.33 29519 21 22684 8009 73.91 30693 22 21874 7796 73.72 29670 23 21620 7651 73.86 29271 24 20583 7613 73.00 28196 25 21061 7337 74.16 28398 26 19463 6728 74.31 26191 27 19618 6735 74.44 26353 28 19126 6623 74.28 25749 29 19076 6639 74.18 25715 30 18861 6390 74.69 25251 31 17894 6179 74.33 24073 32 17445 5940 74.60 23385 33 17243 5771 74.92 23014 34 16375 5710 74.15 22085 35 16182 5461 74.77 21643 36 15707 5409 74.38 21116 37 15653 5238 74.93 20891 38 15129 5051 74.97 20180 39 14937 4937 75.16 19874 40 14110 4841 74.46 18951 41 14500 4939 74.59 19439 42 13580 4549 74.91 18129 43 13865 4584 75.15 18449 44 13450 4428 75.23 17878 45 13072 4152 75.89 17224 46 12406 4185 74.78 16591 47 12855 3977 76.37 16832 48 12413 3969 75.77 16382 49 11809 4010 74.65 15819 50 11257 3609 75.72 14866 51 11092 3857 74.20 14949 52 10971 3711 74.72 14682 53 11054 3670 75.07 14724 54 10133 3425 74.74 13558 55 10049 3505 74.14 13554 56 9724 3310 74.60 13034 57 9773 3354 74.45 13127 58 9649 3273 74.67 12922 59 9468 3126 75.18 12594 60 9139 2961 75.53 12100 61 8857 3018 74.59 11875 62 8943 2924 75.36 11867 63 8651 2912 74.82 11563 64 8169 2789 74.55 10958 65 7888 2734 74.26 10622 66 7796 2715 74.17 10511 67 7564 2658 74.00 10222 68 7722 2531 75.31 10253 69 7495 2598 74.26 10093 70 7259 2414 75.04 9673 71 7170 2325 75.51 9495 72 7141 2372 75.07 9513 73 7024 2302 75.32 9326 74 6819 2201 75.60 9020 75 6607 2142 75.52 8749 76 6522 2251 74.34 8773 77 6639 2049 76.42 8688 78 6222 2137 74.43 8359 79 6102 2123 74.19 8225 80 6142 2063 74.86 8205 81 5708 1922 74.81 7630 82 5678 1885 75.08 7563 83 5575 1838 75.21 7413 84 5557 1814 75.39 7371 85 5373 1836 74.53 7209 86 5415 1738 75.70 7153 87 5135 1830 73.73 6965 88 5064 1649 75.44 6713 89 5176 1735 74.90 6911 90 5081 1682 75.13 6763 91 4879 1558 75.80 6437 92 4991 1640 75.27 6631 93 4496 1544 74.44 6040 94 4518 1486 75.25 6004 95 4343 1475 74.65 5818 96 4363 1450 75.06 5813 97 4265 1453 74.59 5718 98 4315 1396 75.56 5711 99 4177 1340 75.71 5517 100 4027 1295 75.67 5322 101 3841 1267 75.20 5108 102 3801 1266 75.01 5067 103 3760 1264 74.84 5024 104 3551 1208 74.62 4759 105 3740 1220 75.40 4960 106 3687 1176 75.82 4863 107 3545 1131 75.81 4676 108 3399 1157 74.60 4556 109 3188 1074 74.80 4262 110 3184 1108 74.18 4292 111 3170 1061 74.92 4231 112 3171 1067 74.82 4238 113 2999 1091 73.33 4090 114 3107 969 76.23 4076 115 2957 973 75.24 3930 116 2874 991 74.36 3865 117 2812 939 74.97 3751 118 2742 898 75.33 3640 119 2591 975 72.66 3566 120 2535 869 74.47 3404 121 2538 912 73.57 3450 122 2509 922 73.13 3431 123 2513 903 73.57 3416 124 2410 814 74.75 3224 125 2351 770 75.33 3121 126 2355 762 75.55 3117 127 2291 834 73.31 3125 128 2220 796 73.61 3016 129 2203 749 74.63 2952 130 2328 752 75.58 3080 131 2229 784 73.98 3013 132 2094 714 74.57 2808 133 2008 774 72.18 2782 134 2016 684 74.67 2700 135 1847 687 72.89 2534 136 1837 663 73.48 2500 137 1835 664 73.43 2499 138 1824 576 76.00 2400 139 1783 697 71.90 2480 140 1770 649 73.17 2419 141 1658 582 74.02 2240 142 1703 559 75.29 2262 143 1630 598 73.16 2228 144 1634 557 74.58 2191 145 1253 255 83.09 1508 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7384 186358 3.81 193742 2 6354 124099 4.87 130453 3 5182 112716 4.40 117898 4 3622 110769 3.17 114391 5 4834 108285 4.27 113119 6 6612 103824 5.99 110436 7 2792 105218 2.58 108010 8 2544 102090 2.43 104634 9 2312 98090 2.30 100402 10 2346 98564 2.32 100910 11 2852 97111 2.85 99963 12 1762 102739 1.69 104501 13 1995 91612 2.13 93607 14 1614 91150 1.74 92764 15 1847 88963 2.03 90810 16 1493 89012 1.65 90505 17 1504 84462 1.75 85966 18 1237 84134 1.45 85371 19 1190 82485 1.42 83675 20 1060 82918 1.26 83978 21 989 80214 1.22 81203 22 1024 78263 1.29 79287 23 865 77306 1.11 78171 24 830 75198 1.09 76028 25 780 74015 1.04 74795 26 795 75248 1.05 76043 27 692 70500 0.97 71192 28 674 68904 0.97 69578 29 609 69199 0.87 69808 30 644 67361 0.95 68005 31 551 64734 0.84 65285 32 632 65566 0.95 66198 33 517 62463 0.82 62980 34 602 61836 0.96 62438 35 491 61923 0.79 62414 36 555 61740 0.89 62295 37 467 58327 0.79 58794 38 556 58282 0.94 58838 39 447 56268 0.79 56715 40 481 55177 0.86 55658 41 396 53481 0.74 53877 42 458 53340 0.85 53798 43 367 52058 0.70 52425 44 423 51673 0.81 52096 45 371 49102 0.75 49473 46 385 49093 0.78 49478 47 381 47680 0.79 48061 48 371 47276 0.78 47647 49 365 45271 0.80 45636 50 351 45163 0.77 45514 51 353 42724 0.82 43077 52 332 42659 0.77 42991 53 330 41442 0.79 41772 54 321 40694 0.78 41015 55 357 39522 0.90 39879 56 308 39882 0.77 40190 57 361 37748 0.95 38109 58 338 37823 0.89 38161 59 357 36119 0.98 36476 60 297 36469 0.81 36766 61 356 34866 1.01 35222 62 289 34882 0.82 35171 63 333 33772 0.98 34105 64 321 33798 0.94 34119 65 311 32203 0.96 32514 66 287 31975 0.89 32262 67 273 31120 0.87 31393 68 302 31480 0.95 31782 69 267 29896 0.89 30163 70 293 30112 0.96 30405 71 268 29161 0.91 29429 72 287 28945 0.98 29232 73 291 27938 1.03 28229 74 317 27201 1.15 27518 75 282 27054 1.03 27336 76 266 26730 0.99 26996 77 236 25934 0.90 26170 78 289 25414 1.12 25703 79 270 24819 1.08 25089 80 292 25031 1.15 25323 81 214 23603 0.90 23817 82 265 23734 1.10 23999 83 215 22709 0.94 22924 84 244 22796 1.06 23040 85 189 22151 0.85 22340 86 214 21840 0.97 22054 87 214 21450 0.99 21664 88 205 21651 0.94 21856 89 185 20445 0.90 20630 90 189 20195 0.93 20384 91 204 20330 0.99 20534 92 193 19520 0.98 19713 93 204 18601 1.08 18805 94 184 18399 0.99 18583 95 182 18029 1.00 18211 96 152 18427 0.82 18579 97 207 17505 1.17 17712 98 190 17336 1.08 17526 99 153 16946 0.89 17099 100 174 16665 1.03 16839 101 173 16165 1.06 16338 102 159 16202 0.97 16361 103 186 15632 1.18 15818 104 115 15922 0.72 16037 105 182 14800 1.21 14982 106 140 14911 0.93 15051 107 146 14644 0.99 14790 108 142 14510 0.97 14652 109 150 14040 1.06 14190 110 135 13451 0.99 13586 111 164 13364 1.21 13528 112 128 13359 0.95 13487 113 157 12800 1.21 12957 114 121 12713 0.94 12834 115 89 12591 0.70 12680 116 140 12317 1.12 12457 117 113 11881 0.94 11994 118 118 11726 1.00 11844 119 111 11439 0.96 11550 120 116 11472 1.00 11588 121 101 11325 0.88 11426 122 95 11272 0.84 11367 123 93 10775 0.86 10868 124 111 10790 1.02 10901 125 124 10350 1.18 10474 126 104 10292 1.00 10396 127 84 10046 0.83 10130 128 103 10084 1.01 10187 129 85 9471 0.89 9556 130 100 9352 1.06 9452 131 106 9439 1.11 9545 132 96 9310 1.02 9406 133 80 8752 0.91 8832 134 86 8744 0.97 8830 135 73 8456 0.86 8529 136 75 8463 0.88 8538 137 76 8108 0.93 8184 138 73 8021 0.90 8094 139 82 8060 1.01 8142 140 71 7982 0.88 8053 141 76 7974 0.94 8050 142 69 7649 0.89 7718 143 84 7362 1.13 7446 144 69 6841 1.00 6910 145 54 3107 1.71 3161 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 30754 331772 8.48 362526 2 26321 364488 6.74 390809 3 24255 347227 6.53 371482 4 18169 327273 5.26 345442 5 16775 308089 5.16 324864 6 16868 299234 5.34 316102 7 14876 282654 5.00 297530 8 13672 279619 4.66 293291 9 12875 269342 4.56 282217 10 12951 265104 4.66 278055 11 13478 261447 4.90 274925 12 10831 252883 4.11 263714 13 10035 245772 3.92 255807 14 10250 241597 4.07 251847 15 9609 238891 3.87 248500 16 9501 230502 3.96 240003 17 8722 225241 3.73 233963 18 8998 220163 3.93 229161 19 7831 214234 3.53 222065 20 8125 210971 3.71 219096 21 7396 211506 3.38 218902 22 7597 205483 3.57 213080 23 6670 202008 3.20 208678 24 7493 196294 3.68 203787 25 5887 193721 2.95 199608 26 6795 188847 3.47 195642 27 5719 189345 2.93 195064 28 6267 185552 3.27 191819 29 5426 180012 2.93 185438 30 6151 177148 3.36 183299 31 4693 174743 2.62 179436 32 5447 174336 3.03 179783 33 4690 172033 2.65 176723 34 5337 166770 3.10 172107 35 4433 163203 2.64 167636 36 5099 157841 3.13 162940 37 4080 154400 2.57 158480 38 4776 152606 3.03 157382 39 4144 149260 2.70 153404 40 4557 145715 3.03 150272 41 4049 143646 2.74 147695 42 4656 139878 3.22 144534 43 3913 135612 2.80 139525 44 4506 132000 3.30 136506 45 3987 130666 2.96 134653 46 4199 126851 3.20 131050 47 3783 125810 2.92 129593 48 4090 123503 3.21 127593 49 3792 120480 3.05 124272 50 4080 117532 3.35 121612 51 3652 115963 3.05 119615 52 3858 114766 3.25 118624 53 3577 112868 3.07 116445 54 3945 109394 3.48 113339 55 3344 106875 3.03 110219 56 3689 105118 3.39 108807 57 3430 103098 3.22 106528 58 3555 100406 3.42 103961 59 3201 99837 3.11 103038 60 3546 98657 3.47 102203 61 3066 96209 3.09 99275 62 3564 92761 3.70 96325 63 3009 91220 3.19 94229 64 3430 89897 3.68 93327 65 2825 87681 3.12 90506 66 3455 86756 3.83 90211 67 2792 85587 3.16 88379 68 3220 83312 3.72 86532 69 2851 81725 3.37 84576 70 3096 80356 3.71 83452 71 2591 78158 3.21 80749 72 3002 77217 3.74 80219 73 2560 75219 3.29 77779 74 2977 73492 3.89 76469 75 2416 72713 3.22 75129 76 2812 71110 3.80 73922 77 2430 70180 3.35 72610 78 2703 68027 3.82 70730 79 2349 67602 3.36 69951 80 2588 66076 3.77 68664 81 2297 64996 3.41 67293 82 2625 62675 4.02 65300 83 2094 62661 3.23 64755 84 2462 61820 3.83 64282 85 2073 60071 3.34 62144 86 2362 58749 3.87 61111 87 2021 58557 3.34 60578 88 2184 57095 3.68 59279 89 2071 56094 3.56 58165 90 2216 54736 3.89 56952 91 1843 53625 3.32 55468 92 2076 53260 3.75 55336 93 1912 52219 3.53 54131 94 1985 50903 3.75 52888 95 1758 50020 3.40 51778 96 1970 48896 3.87 50866 97 1771 48249 3.54 50020 98 1860 47621 3.76 49481 99 1723 46957 3.54 48680 100 1745 46314 3.63 48059 101 1585 45309 3.38 46894 102 1750 44211 3.81 45961 103 1501 43198 3.36 44699 104 1584 42840 3.57 44424 105 1460 42034 3.36 43494 106 1515 40951 3.57 42466 107 1338 40402 3.21 41740 108 1516 39557 3.69 41073 109 1382 39082 3.42 40464 110 1366 38144 3.46 39510 111 1297 37721 3.32 39018 112 1361 37249 3.52 38610 113 1253 36341 3.33 37594 114 1362 35760 3.67 37122 115 1185 35044 3.27 36229 116 1238 34456 3.47 35694 117 1143 34015 3.25 35158 118 1137 33569 3.28 34706 119 1111 32939 3.26 34050 120 1157 32467 3.44 33624 121 1059 32013 3.20 33072 122 1129 30880 3.53 32009 123 976 30469 3.10 31445 124 1046 29935 3.38 30981 125 941 29512 3.09 30453 126 1011 28728 3.40 29739 127 908 28417 3.10 29325 128 927 27972 3.21 28899 129 885 27778 3.09 28663 130 904 27089 3.23 27993 131 853 26204 3.15 27057 132 953 26040 3.53 26993 133 782 25507 2.97 26289 134 873 25034 3.37 25907 135 716 24711 2.82 25427 136 830 24093 3.33 24923 137 778 23915 3.15 24693 138 746 23558 3.07 24304 139 723 23136 3.03 23859 140 762 22574 3.27 23336 141 739 22046 3.24 22785 142 707 21574 3.17 22281 143 642 21098 2.95 21740 144 602 19576 2.98 20178 145 465 9398 4.71 9863