CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 95797 57288 62.58 153085 2 99288 53105 65.15 152393 3 110872 53708 67.37 164580 4 117983 51839 69.47 169822 5 121734 50357 70.74 172091 6 135065 49986 72.99 185051 7 145849 49349 74.72 195198 8 143902 48212 74.90 192114 9 143213 49877 74.17 193090 10 137944 47251 74.49 185195 11 141206 49246 74.14 190452 12 139844 47620 74.60 187464 13 143415 49398 74.38 192813 14 144180 48007 75.02 192187 15 148132 49067 75.12 197199 16 149550 48724 75.43 198274 17 151478 50796 74.89 202274 18 151816 49705 75.34 201521 19 150463 49210 75.35 199673 20 145817 46986 75.63 192803 21 151508 48449 75.77 199957 22 148521 47493 75.77 196014 23 151260 49324 75.41 200584 24 146330 48545 75.09 194875 25 149089 47982 75.65 197071 26 145041 47628 75.28 192669 27 147189 47915 75.44 195104 28 152124 48378 75.87 200502 29 150316 48129 75.75 198445 30 153745 48507 76.02 202252 31 149983 48424 75.59 198407 32 150800 47353 76.10 198153 33 152478 48006 76.05 200484 34 152488 47561 76.23 200049 35 151835 48343 75.85 200178 36 151630 47900 75.99 199530 37 151632 47441 76.17 199073 38 150754 46707 76.35 197461 39 150895 47010 76.25 197905 40 145228 46707 75.67 191935 41 151237 47268 76.19 198505 42 146202 46341 75.93 192543 43 152323 47316 76.30 199639 44 146195 46355 75.93 192550 45 147756 46551 76.04 194307 46 143994 45654 75.93 189648 47 150565 46289 76.49 196854 48 149809 46024 76.50 195833 49 148035 46854 75.96 194889 50 143789 45502 75.96 189291 51 146746 46267 76.03 193013 52 143916 45233 76.09 189149 53 149175 47181 75.97 196356 54 145587 44968 76.40 190555 55 144581 45579 76.03 190160 56 141715 44285 76.19 186000 57 145099 45718 76.04 190817 58 144545 45492 76.06 190037 59 141455 44694 75.99 186149 60 141167 44521 76.02 185688 61 141852 44312 76.20 186164 62 137780 43585 75.97 181365 63 139062 44154 75.90 183216 64 133620 42466 75.88 176086 65 133517 42829 75.71 176346 66 131772 42812 75.48 174584 67 131650 42345 75.66 173995 68 132485 42550 75.69 175035 69 132552 42128 75.88 174680 70 127654 41001 75.69 168655 71 129018 40837 75.96 169855 72 129107 41118 75.84 170225 73 128954 40981 75.88 169935 74 127586 40177 76.05 167763 75 128680 40726 75.96 169406 76 125942 39442 76.15 165384 77 129206 40128 76.30 169334 78 125267 39348 76.10 164615 79 122347 38876 75.89 161223 80 122423 39300 75.70 161723 81 117122 37526 75.73 154648 82 117135 37615 75.69 154750 83 117346 37317 75.87 154663 84 116383 38133 75.32 154516 85 116579 37924 75.45 154503 86 115043 36573 75.88 151616 87 113604 36750 75.56 150354 88 113603 35622 76.13 149225 89 113860 36787 75.58 150647 90 111287 35405 75.86 146692 91 107963 34748 75.65 142711 92 109050 34407 76.02 143457 93 105781 33620 75.88 139401 94 105852 34065 75.65 139917 95 106380 34077 75.74 140457 96 103290 33606 75.45 136896 97 103331 33221 75.67 136552 98 100684 32011 75.88 132695 99 98766 32685 75.14 131451 100 96590 31419 75.46 128009 101 96159 31721 75.19 127880 102 95531 31268 75.34 126799 103 97317 31828 75.35 129145 104 92798 30728 75.12 123526 105 93661 30944 75.17 124605 106 93565 30562 75.38 124127 107 91190 30200 75.12 121390 108 89509 29803 75.02 119312 109 87711 29198 75.03 116909 110 85464 28717 74.85 114181 111 85321 27985 75.30 113306 112 85606 28392 75.09 113998 113 84073 28330 74.80 112403 114 82101 27616 74.83 109717 115 82075 27417 74.96 109492 116 81407 26524 75.43 107931 117 79034 26914 74.60 105948 118 76866 26457 74.39 103323 119 78591 26350 74.89 104941 120 74726 25497 74.56 100223 121 74668 25482 74.56 100150 122 74092 25454 74.43 99546 123 74770 24774 75.11 99544 124 73214 24974 74.57 98188 125 70550 24530 74.20 95080 126 70278 24210 74.38 94488 127 69228 23816 74.40 93044 128 67177 23507 74.08 90684 129 65860 23173 73.97 89033 130 67146 23615 73.98 90761 131 66573 23304 74.07 89877 132 64710 22275 74.39 86985 133 63468 21966 74.29 85434 134 62163 21387 74.40 83550 135 62164 21661 74.16 83825 136 59643 21532 73.47 81175 137 59452 20883 74.01 80335 138 58150 20936 73.53 79086 139 58435 21152 73.42 79587 140 57135 20996 73.13 78131 141 57201 19959 74.13 77160 142 56691 20266 73.67 76957 143 54836 20135 73.14 74971 144 54270 19149 73.92 73419 145 45875 9580 82.72 55455 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 19521 900936 2.12 920457 2 17291 608023 2.77 625314 3 14176 573104 2.41 587280 4 10796 594335 1.78 605131 5 12652 584066 2.12 596718 6 15287 580981 2.56 596268 7 10251 591473 1.70 601724 8 9424 593925 1.56 603349 9 9354 582305 1.58 591659 10 7874 601323 1.29 609197 11 10379 608721 1.68 619100 12 7049 620720 1.12 627769 13 9303 606468 1.51 615771 14 6988 604627 1.14 611615 15 8874 610697 1.43 619571 16 6892 615405 1.11 622297 17 7292 597892 1.20 605184 18 6168 614278 0.99 620446 19 6189 610796 1.00 616985 20 6257 629064 0.98 635321 21 5872 612995 0.95 618867 22 6089 614301 0.98 620390 23 5619 613478 0.91 619097 24 6012 618831 0.96 624843 25 5429 611098 0.88 616527 26 6095 634310 0.95 640405 27 4980 603554 0.82 608534 28 6079 614787 0.98 620866 29 5155 613228 0.83 618383 30 6466 618655 1.03 625121 31 5001 604840 0.82 609841 32 6612 626533 1.04 633145 33 5384 615998 0.87 621382 34 6790 619370 1.08 626160 35 5489 612730 0.89 618219 36 7097 639373 1.10 646470 37 5191 610812 0.84 616003 38 6703 627013 1.06 633716 39 5364 609668 0.87 615032 40 6150 617649 0.99 623799 41 5371 610325 0.87 615696 42 5744 629255 0.90 634999 43 5606 619910 0.90 625516 44 5510 623746 0.88 629256 45 5509 604945 0.90 610454 46 5428 616442 0.87 621870 47 5676 600307 0.94 605983 48 5270 603612 0.87 608882 49 5869 600990 0.97 606859 50 5546 614146 0.89 619692 51 6069 592148 1.01 598217 52 5445 601258 0.90 606703 53 6423 591580 1.07 598003 54 5551 598382 0.92 603933 55 6111 585388 1.03 591499 56 5675 597009 0.94 602684 57 6324 575594 1.09 581918 58 5630 594861 0.94 600491 59 6438 578810 1.10 585248 60 5631 582268 0.96 587899 61 6245 571277 1.08 577522 62 5655 578115 0.97 583770 63 6073 567826 1.06 573899 64 5701 574564 0.98 580265 65 5797 563936 1.02 569733 66 5657 565264 0.99 570921 67 5754 554289 1.03 560043 68 6025 571882 1.04 577907 69 5531 554417 0.99 559948 70 6192 561737 1.09 567929 71 5691 549300 1.03 554991 72 6390 556485 1.14 562875 73 5707 545073 1.04 550780 74 6374 547869 1.15 554243 75 5720 540946 1.05 546666 76 6502 545478 1.18 551980 77 5540 526757 1.04 532297 78 6282 525712 1.18 531994 79 5516 520810 1.05 526326 80 6145 528714 1.15 534859 81 5487 510632 1.06 516119 82 6259 518499 1.19 524758 83 5699 500227 1.13 505926 84 5826 506447 1.14 512273 85 5584 494065 1.12 499649 86 5845 498328 1.16 504173 87 5582 484248 1.14 489830 88 5490 492222 1.10 497712 89 5535 470682 1.16 476217 90 5304 482664 1.09 487968 91 5679 474732 1.18 480411 92 5378 472561 1.13 477939 93 5578 457198 1.21 462776 94 5251 456047 1.14 461298 95 5456 451713 1.19 457169 96 5393 455881 1.17 461274 97 5393 447056 1.19 452449 98 5064 448842 1.12 453906 99 5371 441261 1.20 446632 100 5325 440459 1.19 445784 101 5446 426957 1.26 432403 102 5062 427572 1.17 432634 103 5387 417098 1.28 422485 104 5143 428460 1.19 433603 105 5050 409105 1.22 414155 106 4919 412669 1.18 417588 107 5018 406921 1.22 411939 108 4806 405003 1.17 409809 109 5027 394803 1.26 399830 110 4847 395150 1.21 399997 111 4775 382696 1.23 387471 112 4867 393656 1.22 398523 113 4604 376697 1.21 381301 114 5081 375633 1.33 380714 115 4417 369493 1.18 373910 116 4988 377418 1.30 382406 117 4544 359273 1.25 363817 118 4677 360677 1.28 365354 119 4525 353165 1.27 357690 120 4722 355146 1.31 359868 121 4515 346044 1.29 350559 122 4565 346208 1.30 350773 123 4224 337607 1.24 341831 124 4751 340510 1.38 345261 125 4482 327798 1.35 332280 126 4495 330715 1.34 335210 127 4342 321833 1.33 326175 128 4581 322360 1.40 326941 129 4198 311915 1.33 316113 130 4234 310590 1.34 314824 131 4104 309705 1.31 313809 132 3979 307449 1.28 311428 133 4128 294574 1.38 298702 134 4151 294023 1.39 298174 135 4147 286262 1.43 290409 136 4212 295454 1.41 299666 137 3941 280065 1.39 284006 138 4001 279262 1.41 283263 139 4387 278138 1.55 282525 140 4190 276581 1.49 280771 141 4385 272204 1.59 276589 142 4597 270612 1.67 275209 143 4589 261469 1.72 266058 144 4341 251090 1.70 255431 145 3375 126953 2.59 130328 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 106752 1597476 6.26 1704228 2 102801 1810475 5.37 1913276 3 94521 1796012 5.00 1890533 4 84758 1726198 4.68 1810956 5 80255 1695062 4.52 1775317 6 76838 1681196 4.37 1758034 7 73039 1647477 4.25 1720516 8 67453 1648668 3.93 1716121 9 70754 1629148 4.16 1699902 10 65583 1607654 3.92 1673237 11 66145 1622968 3.92 1689113 12 62838 1583766 3.82 1646604 13 62158 1575394 3.80 1637552 14 62636 1580122 3.81 1642758 15 64173 1574160 3.92 1638333 16 61001 1562791 3.76 1623792 17 62919 1543612 3.92 1606531 18 61647 1537844 3.85 1599491 19 59348 1528816 3.74 1588164 20 61245 1524846 3.86 1586091 21 59694 1565366 3.67 1625060 22 63368 1541497 3.95 1604865 23 54912 1551983 3.42 1606895 24 65326 1527674 4.10 1593000 25 52650 1542432 3.30 1595082 26 64134 1541190 4.00 1605324 27 54375 1558209 3.37 1612584 28 61729 1555372 3.82 1617101 29 52139 1550971 3.25 1603110 30 63303 1563754 3.89 1627057 31 48895 1565212 3.03 1614107 32 61275 1591597 3.71 1652872 33 50183 1585034 3.07 1635217 34 60435 1573291 3.70 1633726 35 49849 1589657 3.04 1639506 36 60726 1574489 3.71 1635215 37 49137 1569125 3.04 1618262 38 59025 1569094 3.63 1628119 39 50990 1580939 3.12 1631929 40 56368 1569777 3.47 1626145 41 52431 1574559 3.22 1626990 42 59194 1581743 3.61 1640937 43 50927 1565044 3.15 1615971 44 58438 1557068 3.62 1615506 45 52551 1564273 3.25 1616824 46 56515 1556707 3.50 1613222 47 53635 1575079 3.29 1628714 48 55853 1563914 3.45 1619767 49 54217 1550813 3.38 1605030 50 54816 1552219 3.41 1607035 51 55459 1550612 3.45 1606071 52 53051 1549139 3.31 1602190 53 53730 1551980 3.35 1605710 54 55582 1538544 3.49 1594126 55 51425 1534352 3.24 1585777 56 52052 1535648 3.28 1587700 57 52357 1527797 3.31 1580154 58 53249 1509621 3.41 1562870 59 52574 1528448 3.33 1581022 60 52500 1525773 3.33 1578273 61 50788 1521814 3.23 1572602 62 54399 1501188 3.50 1555587 63 50158 1495787 3.24 1545945 64 52817 1486402 3.43 1539219 65 49129 1490832 3.19 1539961 66 55663 1481260 3.62 1536923 67 47120 1476036 3.09 1523156 68 53112 1458802 3.51 1511914 69 49310 1457826 3.27 1507136 70 53026 1445102 3.54 1498128 71 46572 1434636 3.14 1481208 72 52488 1425056 3.55 1477544 73 44677 1414463 3.06 1459140 74 53743 1404662 3.69 1458405 75 44430 1395599 3.09 1440029 76 49895 1388912 3.47 1438807 77 45319 1378603 3.18 1423922 78 50402 1365045 3.56 1415447 79 43381 1357729 3.10 1401110 80 49253 1349715 3.52 1398968 81 44035 1337419 3.19 1381454 82 48262 1313596 3.54 1361858 83 41252 1317826 3.04 1359078 84 48064 1310572 3.54 1358636 85 42909 1304470 3.18 1347379 86 46142 1298658 3.43 1344800 87 42240 1288845 3.17 1331085 88 43290 1268010 3.30 1311300 89 43137 1255430 3.32 1298567 90 43756 1248340 3.39 1292096 91 39161 1234568 3.07 1273729 92 41822 1228376 3.29 1270198 93 41525 1221174 3.29 1262699 94 41671 1201186 3.35 1242857 95 39413 1191172 3.20 1230585 96 40463 1177564 3.32 1218027 97 38668 1168834 3.20 1207502 98 39119 1158140 3.27 1197259 99 38823 1150449 3.26 1189272 100 37711 1133201 3.22 1170912 101 36592 1126841 3.15 1163433 102 38304 1119722 3.31 1158026 103 34511 1106798 3.02 1141309 104 36833 1093391 3.26 1130224 105 36000 1080325 3.22 1116325 106 35498 1071328 3.21 1106826 107 33609 1060880 3.07 1094489 108 36028 1049926 3.32 1085954 109 33235 1044711 3.08 1077946 110 34650 1022532 3.28 1057182 111 32698 1022041 3.10 1054739 112 33785 1009184 3.24 1042969 113 31642 995229 3.08 1026871 114 34351 980652 3.38 1015003 115 29315 968289 2.94 997604 116 33741 957881 3.40 991622 117 29308 951562 2.99 980870 118 31727 939090 3.27 970817 119 29640 931484 3.08 961124 120 30957 926422 3.23 957379 121 28078 915247 2.98 943325 122 30356 904674 3.25 935030 123 27517 894553 2.98 922070 124 29608 875120 3.27 904728 125 26269 868288 2.94 894557 126 29024 855505 3.28 884529 127 25828 850014 2.95 875842 128 27175 839701 3.13 866876 129 27300 832833 3.17 860133 130 26209 815543 3.11 841752 131 25066 807544 3.01 832610 132 26343 801619 3.18 827962 133 24255 797150 2.95 821405 134 26731 786202 3.29 812933 135 24077 771535 3.03 795612 136 24198 767833 3.06 792031 137 24364 762565 3.10 786929 138 24793 753112 3.19 777905 139 23932 747588 3.10 771520 140 23857 737003 3.14 760860 141 24103 727200 3.21 751303 142 24607 715673 3.32 740280 143 23014 707392 3.15 730406 144 21518 674487 3.09 696005 145 15266 341546 4.28 356812 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 31022 22183 58.31 53205 2 32556 20122 61.80 52678 3 35135 19611 64.18 54746 4 37509 18665 66.77 56174 5 38410 17347 68.89 55757 6 43021 17106 71.55 60127 7 45034 16892 72.72 61926 8 43721 16191 72.98 59912 9 41238 15996 72.05 57234 10 40794 15711 72.20 56505 11 41982 15470 73.07 57452 12 40585 15233 72.71 55818 13 40315 14714 73.26 55029 14 41373 15035 73.35 56408 15 40183 14636 73.30 54819 16 40882 14728 73.52 55610 17 40156 14392 73.62 54548 18 41471 14148 74.56 55619 19 40707 14506 73.73 55213 20 38693 13692 73.86 52385 21 38746 13360 74.36 52106 22 37977 12845 74.73 50822 23 38778 13653 73.96 52431 24 36848 12551 74.59 49399 25 37130 12792 74.38 49922 26 35291 11915 74.76 47206 27 35669 11804 75.14 47473 28 35408 11778 75.04 47186 29 36194 11959 75.16 48153 30 35280 11749 75.02 47029 31 33616 11368 74.73 44984 32 33543 10904 75.47 44447 33 33234 11292 74.64 44526 34 32437 10870 74.90 43307 35 32400 10519 75.49 42919 36 31035 10586 74.57 41621 37 31724 10391 75.33 42115 38 30561 9988 75.37 40549 39 30594 10230 74.94 40824 40 28143 9803 74.17 37946 41 30670 9957 75.49 40627 42 27433 8881 75.54 36314 43 29503 9323 75.99 38826 44 27445 9261 74.77 36706 45 27422 8823 75.66 36245 46 27150 8893 75.33 36043 47 27912 9103 75.41 37015 48 27460 8901 75.52 36361 49 26438 8780 75.07 35218 50 25478 8419 75.16 33897 51 25601 8429 75.23 34030 52 25102 8431 74.86 33533 53 26585 8535 75.70 35120 54 24094 8109 74.82 32203 55 24150 8206 74.64 32356 56 23642 8094 74.50 31736 57 24093 8284 74.41 32377 58 23070 7582 75.26 30652 59 22787 7338 75.64 30125 60 22721 7289 75.71 30010 61 22510 7309 75.49 29819 62 21923 7308 75.00 29231 63 21893 7305 74.98 29198 64 20850 6982 74.91 27832 65 20351 6711 75.20 27062 66 20901 6784 75.50 27685 67 20378 6490 75.84 26868 68 19784 6463 75.38 26247 69 20010 6501 75.48 26511 70 19029 6325 75.05 25354 71 18712 6242 74.99 24954 72 18752 6325 74.78 25077 73 18779 6175 75.25 24954 74 19019 5938 76.21 24957 75 18474 5981 75.54 24455 76 18261 5854 75.72 24115 77 19660 6143 76.19 25803 78 17861 5759 75.62 23620 79 17264 5692 75.20 22956 80 17604 5683 75.60 23287 81 16525 5380 75.44 21905 82 16168 5342 75.17 21510 83 16557 5526 74.98 22083 84 16057 5256 75.34 21313 85 16107 5263 75.37 21370 86 16023 5108 75.83 21131 87 15383 5065 75.23 20448 88 15356 5201 74.70 20557 89 15781 5026 75.84 20807 90 15709 4905 76.21 20614 91 14633 4770 75.42 19403 92 15354 4598 76.95 19952 93 14144 4551 75.66 18695 94 14649 4614 76.05 19263 95 14290 4519 75.97 18809 96 14168 4697 75.10 18865 97 13639 4626 74.67 18265 98 13200 4184 75.93 17384 99 13217 4175 75.99 17392 100 13253 4159 76.11 17412 101 12713 4173 75.29 16886 102 12833 4142 75.60 16975 103 12575 4341 74.34 16916 104 12389 3970 75.73 16359 105 12673 4082 75.64 16755 106 12701 3921 76.41 16622 107 11757 3851 75.33 15608 108 11668 3974 74.59 15642 109 11596 3932 74.68 15528 110 11704 3618 76.39 15322 111 11339 3555 76.13 14894 112 11304 3549 76.11 14853 113 10721 3543 75.16 14264 114 11058 3649 75.19 14707 115 10853 3684 74.66 14537 116 10455 3462 75.12 13917 117 10159 3497 74.39 13656 118 10195 3281 75.65 13476 119 10336 3503 74.69 13839 120 9697 3225 75.04 12922 121 9490 3264 74.41 12754 122 9547 3197 74.91 12744 123 9494 3122 75.25 12616 124 9422 3107 75.20 12529 125 9028 3297 73.25 12325 126 9363 3065 75.34 12428 127 8871 3102 74.09 11973 128 8765 2917 75.03 11682 129 8850 2985 74.78 11835 130 8883 2976 74.91 11859 131 8876 3061 74.36 11937 132 8078 2690 75.02 10768 133 8353 2834 74.67 11187 134 8085 2788 74.36 10873 135 7880 2789 73.86 10669 136 7921 2696 74.61 10617 137 7637 2445 75.75 10082 138 7754 2685 74.28 10439 139 7569 2732 73.48 10301 140 7668 2527 75.21 10195 141 7150 2686 72.69 9836 142 7200 2423 74.82 9623 143 6914 2482 73.58 9396 144 6854 2167 75.98 9021 145 5307 1183 81.77 6490 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8752 346516 2.46 355268 2 7973 230824 3.34 238797 3 6581 211347 3.02 217928 4 4896 218727 2.19 223623 5 5855 209769 2.72 215624 6 7130 207120 3.33 214250 7 4144 204561 1.99 208705 8 3901 204045 1.88 207946 9 3607 198260 1.79 201867 10 3482 199331 1.72 202813 11 4044 199161 1.99 203205 12 2956 205940 1.42 208896 13 3406 191155 1.75 194561 14 2835 193604 1.44 196439 15 3128 188160 1.64 191288 16 2759 190823 1.43 193582 17 2727 184833 1.45 187560 18 2279 184420 1.22 186699 19 2199 181469 1.20 183668 20 2251 186095 1.20 188346 21 2101 180427 1.15 182528 22 1878 177391 1.05 179269 23 1810 175024 1.02 176834 24 1830 173939 1.04 175769 25 1738 171715 1.00 173453 26 1799 174807 1.02 176606 27 1662 164136 1.00 165798 28 1608 164735 0.97 166343 29 1540 162785 0.94 164325 30 1603 164575 0.96 166178 31 1408 155077 0.90 156485 32 1631 161005 1.00 162636 33 1350 155951 0.86 157301 34 1533 157538 0.96 159071 35 1276 152513 0.83 153789 36 1633 157887 1.02 159520 37 1218 148090 0.82 149308 38 1476 152473 0.96 153949 39 1170 144474 0.80 145644 40 1324 143273 0.92 144597 41 1282 138422 0.92 139704 42 1296 144476 0.89 145772 43 1094 137070 0.79 138164 44 1165 136266 0.85 137431 45 1127 131763 0.85 132890 46 1151 133339 0.86 134490 47 1186 129265 0.91 130451 48 1074 127233 0.84 128307 49 1080 123799 0.86 124879 50 1067 127332 0.83 128399 51 1128 121456 0.92 122584 52 961 121680 0.78 122641 53 1104 118493 0.92 119597 54 998 120560 0.82 121558 55 1044 115377 0.90 116421 56 989 118723 0.83 119712 57 1126 113197 0.98 114323 58 975 113850 0.85 114825 59 1100 109190 1.00 110290 60 971 110177 0.87 111148 61 957 107586 0.88 108543 62 956 108301 0.88 109257 63 918 103690 0.88 104608 64 882 105597 0.83 106479 65 918 102603 0.89 103521 66 895 102323 0.87 103218 67 848 99165 0.85 100013 68 956 100720 0.94 101676 69 872 97025 0.89 97897 70 780 97973 0.79 98753 71 902 96035 0.93 96937 72 882 95853 0.91 96735 73 866 93933 0.91 94799 74 840 92425 0.90 93265 75 828 91432 0.90 92260 76 878 93305 0.93 94183 77 763 87324 0.87 88087 78 850 87681 0.96 88531 79 750 85162 0.87 85912 80 822 87935 0.93 88757 81 750 82542 0.90 83292 82 815 85171 0.95 85986 83 729 80463 0.90 81192 84 763 82255 0.92 83018 85 704 79050 0.88 79754 86 764 79530 0.95 80294 87 672 78034 0.85 78706 88 716 78970 0.90 79686 89 641 74938 0.85 75579 90 681 76794 0.88 77475 91 680 75300 0.89 75980 92 752 74689 1.00 75441 93 539 70312 0.76 70851 94 628 70712 0.88 71340 95 616 69923 0.87 70539 96 633 70537 0.89 71170 97 679 67844 0.99 68523 98 655 68639 0.95 69294 99 631 66811 0.94 67442 100 549 66972 0.81 67521 101 657 65327 1.00 65984 102 571 65101 0.87 65672 103 595 62358 0.95 62953 104 509 66096 0.76 66605 105 574 61688 0.92 62262 106 588 62424 0.93 63012 107 532 61086 0.86 61618 108 497 61228 0.81 61725 109 548 59140 0.92 59688 110 540 58502 0.91 59042 111 499 57762 0.86 58261 112 464 59047 0.78 59511 113 471 55611 0.84 56082 114 511 56116 0.90 56627 115 479 54406 0.87 54885 116 480 55970 0.85 56450 117 500 53197 0.93 53697 118 502 52747 0.94 53249 119 449 51459 0.86 51908 120 462 52084 0.88 52546 121 454 50082 0.90 50536 122 500 49865 0.99 50365 123 438 48582 0.89 49020 124 440 50803 0.86 51243 125 455 47864 0.94 48319 126 465 48593 0.95 49058 127 410 45927 0.88 46337 128 434 47542 0.90 47976 129 373 45828 0.81 46201 130 426 45224 0.93 45650 131 429 44982 0.94 45411 132 405 45039 0.89 45444 133 388 42608 0.90 42996 134 400 43912 0.90 44312 135 428 41939 1.01 42367 136 438 42817 1.01 43255 137 399 40759 0.97 41158 138 420 40309 1.03 40729 139 392 40575 0.96 40967 140 397 40410 0.97 40807 141 430 39273 1.08 39703 142 426 39185 1.08 39611 143 375 36831 1.01 37206 144 317 35222 0.89 35539 145 205 15867 1.28 16072 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 42386 622699 6.37 665085 2 40866 693695 5.56 734561 3 35756 680471 4.99 716227 4 32147 649637 4.72 681784 5 29308 626479 4.47 655787 6 29182 614320 4.53 643502 7 27259 594764 4.38 622023 8 25260 591123 4.10 616383 9 24471 580485 4.05 604956 10 24485 564319 4.16 588804 11 22895 561864 3.92 584759 12 22289 549404 3.90 571693 13 20324 537664 3.64 557988 14 21325 535045 3.83 556370 15 20162 524646 3.70 544808 16 19608 513585 3.68 533193 17 18554 507353 3.53 525907 18 19395 501348 3.72 520743 19 17292 491953 3.40 509245 20 17571 484865 3.50 502436 21 16905 491333 3.33 508238 22 17337 476886 3.51 494223 23 15081 473129 3.09 488210 24 17549 461758 3.66 479307 25 13441 465294 2.81 478735 26 15997 453879 3.40 469876 27 14102 454967 3.01 469069 28 14796 449610 3.19 464406 29 13124 442728 2.88 455852 30 14898 440000 3.28 454898 31 11870 440997 2.62 452867 32 14387 440489 3.16 454876 33 11747 431258 2.65 443005 34 13603 425455 3.10 439058 35 11141 420047 2.58 431188 36 13214 409591 3.13 422805 37 10623 405024 2.56 415647 38 12745 401077 3.08 413822 39 10898 399795 2.65 410693 40 11892 390024 2.96 401916 41 10654 388381 2.67 399035 42 12295 385331 3.09 397626 43 9979 378636 2.57 388615 44 11878 369022 3.12 380900 45 10188 367468 2.70 377656 46 11460 361723 3.07 373183 47 9929 363448 2.66 373377 48 10929 355448 2.98 366377 49 10114 352509 2.79 362623 50 10594 346831 2.96 357425 51 10231 340920 2.91 351151 52 9990 341531 2.84 351521 53 9487 336941 2.74 346428 54 10853 330577 3.18 341430 55 8837 325321 2.64 334158 56 9761 324637 2.92 334398 57 9071 318686 2.77 327757 58 9272 313072 2.88 322344 59 9206 311969 2.87 321175 60 9308 309846 2.92 319154 61 8510 305591 2.71 314101 62 9334 299620 3.02 308954 63 8493 295636 2.79 304129 64 9207 295289 3.02 304496 65 8085 293677 2.68 301762 66 9320 288591 3.13 297911 67 7725 286538 2.63 294263 68 8600 279117 2.99 287717 69 8184 278103 2.86 286287 70 8377 276566 2.94 284943 71 7611 269455 2.75 277066 72 8661 268800 3.12 277461 73 7181 264995 2.64 272176 74 8673 261421 3.21 270094 75 7009 258042 2.64 265051 76 7835 253960 2.99 261795 77 7205 250922 2.79 258127 78 7982 247016 3.13 254998 79 6893 245463 2.73 252356 80 7660 243801 3.05 251461 81 6673 238574 2.72 245247 82 7487 234541 3.09 242028 83 6169 234329 2.57 240498 84 7750 231200 3.24 238950 85 6432 227558 2.75 233990 86 7020 227498 2.99 234518 87 6285 226247 2.70 232532 88 6651 220221 2.93 226872 89 6321 219745 2.80 226066 90 6760 216243 3.03 223003 91 5602 213541 2.56 219143 92 6420 212282 2.94 218702 93 6047 211741 2.78 217788 94 6268 208694 2.92 214962 95 5755 203308 2.75 209063 96 5923 200256 2.87 206179 97 5588 199318 2.73 204906 98 5893 197233 2.90 203126 99 5443 196626 2.69 202069 100 5576 191666 2.83 197242 101 5275 190664 2.69 195939 102 5672 189462 2.91 195134 103 4956 187167 2.58 192123 104 5368 185136 2.82 190504 105 5091 181610 2.73 186701 106 5157 180326 2.78 185483 107 4786 178002 2.62 182788 108 5244 176133 2.89 181377 109 4615 174112 2.58 178727 110 5032 168523 2.90 173555 111 4779 169919 2.74 174698 112 4638 167592 2.69 172230 113 4478 165449 2.64 169927 114 4900 161546 2.94 166446 115 4109 159661 2.51 163770 116 4786 159166 2.92 163952 117 4045 156652 2.52 160697 118 4388 154894 2.75 159282 119 4092 153816 2.59 157908 120 4312 151651 2.76 155963 121 3834 151420 2.47 155254 122 4191 148547 2.74 152738 123 3808 146511 2.53 150319 124 4118 143982 2.78 148100 125 3519 143534 2.39 147053 126 3944 140930 2.72 144874 127 3522 138467 2.48 141989 128 3620 137349 2.57 140969 129 3657 135910 2.62 139567 130 3508 131112 2.61 134620 131 3414 131907 2.52 135321 132 3660 129756 2.74 133416 133 3152 128158 2.40 131310 134 3562 127225 2.72 130787 135 3122 125070 2.44 128192 136 3219 124089 2.53 127308 137 3082 122966 2.45 126048 138 3392 121097 2.72 124489 139 3001 121312 2.41 124313 140 3029 118688 2.49 121717 141 3089 116335 2.59 119424 142 3023 114869 2.56 117892 143 2639 113006 2.28 115645 144 2611 104863 2.43 107474 145 1626 49933 3.15 51559