CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 205505 109388 65.26 314893 2 199510 100915 66.41 300425 3 226256 104592 68.39 330848 4 243335 100763 70.72 344098 5 244944 97653 71.50 342597 6 274307 94728 74.33 369035 7 289838 94265 75.46 384103 8 286859 92752 75.57 379611 9 288797 94591 75.33 383388 10 275290 92779 74.79 368069 11 281229 93560 75.04 374789 12 276437 90788 75.28 367225 13 281383 93448 75.07 374831 14 283863 91185 75.69 375048 15 295359 93866 75.88 389225 16 297510 92742 76.24 390252 17 303567 93695 76.41 397262 18 306316 95806 76.17 402122 19 299659 94605 76.00 394264 20 288259 89516 76.30 377775 21 300375 92388 76.48 392763 22 299012 91742 76.52 390754 23 297518 92860 76.21 390378 24 294552 92929 76.02 387481 25 297516 93682 76.05 391198 26 293091 92000 76.11 385091 27 291751 91288 76.17 383039 28 304172 92320 76.72 396492 29 299927 92058 76.51 391985 30 304104 92659 76.65 396763 31 298151 91664 76.49 389815 32 302409 92096 76.66 394505 33 302678 92323 76.63 395001 34 303242 91857 76.75 395099 35 300454 92175 76.52 392629 36 299795 90701 76.77 390496 37 300060 90541 76.82 390601 38 298381 89506 76.92 387887 39 299445 89018 77.08 388463 40 290024 89019 76.51 379043 41 297706 89688 76.85 387394 42 291846 89170 76.60 381016 43 295844 89729 76.73 385573 44 292503 88969 76.68 381472 45 291360 88026 76.80 379386 46 284542 86479 76.69 371021 47 291114 86636 77.07 377750 48 293549 87482 77.04 381031 49 289599 87719 76.75 377318 50 281866 85425 76.74 367291 51 285699 86116 76.84 371815 52 281161 85456 76.69 366617 53 285530 86310 76.79 371840 54 281770 85271 76.77 367041 55 279585 84747 76.74 364332 56 277788 84084 76.76 361872 57 278674 84520 76.73 363194 58 280396 86240 76.48 366636 59 270786 82336 76.68 353122 60 269119 82431 76.55 351550 61 268657 81438 76.74 350095 62 261619 80519 76.47 342138 63 267434 80079 76.96 347513 64 254627 79575 76.19 334202 65 253024 79400 76.11 332424 66 247584 78936 75.83 326520 67 246932 76922 76.25 323854 68 252967 76166 76.86 329133 69 249229 76177 76.59 325406 70 239847 73696 76.50 313543 71 238470 73721 76.39 312191 72 237956 74244 76.22 312200 73 235126 73906 76.08 309032 74 236053 72204 76.58 308257 75 234125 71728 76.55 305853 76 231218 70478 76.64 301696 77 232885 70439 76.78 303324 78 225932 68959 76.62 294891 79 220478 69014 76.16 289492 80 218492 67940 76.28 286432 81 209441 66298 75.96 275739 82 206561 64187 76.29 270748 83 205510 64843 76.02 270353 84 204461 64746 75.95 269207 85 201799 63238 76.14 265037 86 201762 62108 76.46 263870 87 197231 60646 76.48 257877 88 196843 60922 76.37 257765 89 197543 60862 76.45 258405 90 189824 59129 76.25 248953 91 185185 58093 76.12 243278 92 183529 57463 76.16 240992 93 177264 56647 75.78 233911 94 178878 56085 76.13 234963 95 177658 55538 76.18 233196 96 172823 54543 76.01 227366 97 169033 54232 75.71 223265 98 167632 53039 75.96 220671 99 163096 51682 75.94 214778 100 158625 50853 75.72 209478 101 157419 50239 75.81 207658 102 156636 49682 75.92 206318 103 155098 49601 75.77 204699 104 151400 48554 75.72 199954 105 149388 47690 75.80 197078 106 148256 47069 75.90 195325 107 144383 45503 76.04 189886 108 142339 45467 75.79 187806 109 137511 44601 75.51 182112 110 133453 43337 75.49 176790 111 133186 43148 75.53 176334 112 131354 42512 75.55 173866 113 127241 41525 75.39 168766 114 126537 41680 75.22 168217 115 125107 39933 75.80 165040 116 122320 39257 75.70 161577 117 117674 39337 74.95 157011 118 113921 37997 74.99 151918 119 112766 37398 75.10 150164 120 110640 36211 75.34 146851 121 108505 36269 74.95 144774 122 107727 35521 75.20 143248 123 106253 35041 75.20 141294 124 105212 35413 74.82 140625 125 102462 34128 75.01 136590 126 99499 33284 74.93 132783 127 96461 32888 74.57 129349 128 92851 31843 74.46 124694 129 92199 31894 74.30 124093 130 91981 31730 74.35 123711 131 92657 31461 74.65 124118 132 89671 30028 74.91 119699 133 86757 29866 74.39 116623 134 84392 29151 74.33 113543 135 82468 28523 74.30 110991 136 81334 27948 74.43 109282 137 79448 27348 74.39 106796 138 77729 27239 74.05 104968 139 76607 26784 74.09 103391 140 74899 26677 73.74 101576 141 73488 27151 73.02 100639 142 72788 26766 73.11 99554 143 71545 25373 73.82 96918 144 70304 24150 74.43 94454 145 58757 12449 82.52 71206 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 33813 1402212 2.35 1436025 2 28958 950125 2.96 979083 3 23095 914919 2.46 938014 4 17188 929598 1.82 946786 5 20110 928633 2.12 948743 6 25565 926213 2.69 951778 7 14125 937645 1.48 951770 8 13543 948663 1.41 962206 9 11969 929767 1.27 941736 10 11416 957851 1.18 969267 11 13103 973367 1.33 986470 12 10289 990482 1.03 1000771 13 11062 963050 1.14 974112 14 9983 952778 1.04 962761 15 11019 975280 1.12 986299 16 9697 985442 0.97 995139 17 9396 952759 0.98 962155 18 8696 974615 0.88 983311 19 8406 982604 0.85 991010 20 8069 998802 0.80 1006871 21 8040 978362 0.82 986402 22 7825 977459 0.79 985284 23 7676 981744 0.78 989420 24 7478 975939 0.76 983417 25 7297 975417 0.74 982714 26 7509 1005453 0.74 1012962 27 6968 961465 0.72 968433 28 7110 971666 0.73 978776 29 6955 980538 0.70 987493 30 7295 976151 0.74 983446 31 6654 964906 0.68 971560 32 7517 984728 0.76 992245 33 6619 971732 0.68 978351 34 7474 972665 0.76 980139 35 6565 971911 0.67 978476 36 7506 990993 0.75 998499 37 6674 970384 0.68 977058 38 7101 974575 0.72 981676 39 6640 963427 0.68 970067 40 7326 966206 0.75 973532 41 6943 967723 0.71 974666 42 7232 977757 0.73 984989 43 7242 981468 0.73 988710 44 7232 977876 0.73 985108 45 7100 960115 0.73 967215 46 7212 965788 0.74 973000 47 7337 946690 0.77 954027 48 7301 949563 0.76 956864 49 7523 950981 0.78 958504 50 7276 957474 0.75 964750 51 7743 930281 0.83 938024 52 7348 941468 0.77 948816 53 8014 936690 0.85 944704 54 7760 923514 0.83 931274 55 8059 916615 0.87 924674 56 7634 909572 0.83 917206 57 8201 889442 0.91 897643 58 8261 906400 0.90 914661 59 8234 892888 0.91 901122 60 8004 891096 0.89 899100 61 8475 874775 0.96 883250 62 8291 868832 0.95 877123 63 8255 865264 0.95 873519 64 8241 862962 0.95 871203 65 8193 848945 0.96 857138 66 8463 843931 0.99 852394 67 8051 835760 0.95 843811 68 8687 843340 1.02 852027 69 8328 825218 1.00 833546 70 8513 825287 1.02 833800 71 8344 808900 1.02 817244 72 8553 809893 1.05 818446 73 8665 790726 1.08 799391 74 8661 796626 1.08 805287 75 8536 782733 1.08 791269 76 8903 776921 1.13 785824 77 8614 759985 1.12 768599 78 8761 750893 1.15 759654 79 8295 742910 1.10 751205 80 8547 745244 1.13 753791 81 8619 725868 1.17 734487 82 8703 720248 1.19 728951 83 8083 707829 1.13 715912 84 8350 700279 1.18 708629 85 8465 686139 1.22 694604 86 8380 681626 1.21 690006 87 8258 665944 1.22 674202 88 8307 663289 1.24 671596 89 8032 640649 1.24 648681 90 8213 639965 1.27 648178 91 8120 633843 1.26 641963 92 8010 622508 1.27 630518 93 8093 608211 1.31 616304 94 7804 599276 1.29 607080 95 8106 591175 1.35 599281 96 7952 595007 1.32 602959 97 7912 579632 1.35 587544 98 7728 575833 1.32 583561 99 7834 571272 1.35 579106 100 7671 565229 1.34 572900 101 7574 540316 1.38 547890 102 7791 537184 1.43 544975 103 7526 524055 1.42 531581 104 7398 530751 1.37 538149 105 7258 506766 1.41 514024 106 7322 503595 1.43 510917 107 7191 498808 1.42 505999 108 7176 490350 1.44 497526 109 7025 477773 1.45 484798 110 6988 469072 1.47 476060 111 6887 458385 1.48 465272 112 6846 461584 1.46 468430 113 6740 441892 1.50 448632 114 6817 437750 1.53 444567 115 6606 432843 1.50 439449 116 6691 429520 1.53 436211 117 6566 415850 1.55 422416 118 6550 407952 1.58 414502 119 6383 402149 1.56 408532 120 6452 400324 1.59 406776 121 6491 390579 1.63 397070 122 6383 385766 1.63 392149 123 6157 373371 1.62 379528 124 6240 371493 1.65 377733 125 6135 364209 1.66 370344 126 6154 358245 1.69 364399 127 5776 350063 1.62 355839 128 5735 344004 1.64 349739 129 5470 329814 1.63 335284 130 5607 327695 1.68 333302 131 5561 323491 1.69 329052 132 5460 318411 1.69 323871 133 5339 305763 1.72 311102 134 5297 300102 1.73 305399 135 5298 292473 1.78 297771 136 5368 295573 1.78 300941 137 5276 285304 1.82 290580 138 5330 280946 1.86 286276 139 5153 273644 1.85 278797 140 5389 272008 1.94 277397 141 5692 268075 2.08 273767 142 5807 264779 2.15 270586 143 6141 255880 2.34 262021 144 5808 243345 2.33 249153 145 4385 128446 3.30 132831 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 143335 2501173 5.42 2644508 2 130184 2827259 4.40 2957443 3 117646 2801007 4.03 2918653 4 98427 2684524 3.54 2782951 5 85646 2586220 3.21 2671866 6 82800 2572176 3.12 2654976 7 73662 2511159 2.85 2584821 8 69519 2507367 2.70 2576886 9 67874 2460186 2.68 2528060 10 66161 2463084 2.62 2529245 11 64778 2494371 2.53 2559149 12 60417 2433474 2.42 2493891 13 55805 2404822 2.27 2460627 14 58780 2426582 2.37 2485362 15 58596 2418796 2.37 2477392 16 56896 2405989 2.31 2462885 17 53420 2373473 2.20 2426893 18 53714 2378094 2.21 2431808 19 49719 2367131 2.06 2416850 20 51771 2363899 2.14 2415670 21 49031 2405629 2.00 2454660 22 51416 2387062 2.11 2438478 23 46411 2401135 1.90 2447546 24 50999 2387423 2.09 2438422 25 44244 2391055 1.82 2435299 26 49679 2410012 2.02 2459691 27 43889 2440175 1.77 2484064 28 47773 2435552 1.92 2483325 29 42951 2429701 1.74 2472652 30 47879 2445350 1.92 2493229 31 41071 2440290 1.66 2481361 32 46554 2476862 1.84 2523416 33 41045 2469809 1.63 2510854 34 45376 2450731 1.82 2496107 35 40131 2467466 1.60 2507597 36 45202 2447577 1.81 2492779 37 39294 2430241 1.59 2469535 38 44664 2430968 1.80 2475632 39 40921 2457048 1.64 2497969 40 43128 2437109 1.74 2480237 41 40498 2447228 1.63 2487726 42 44511 2450059 1.78 2494570 43 40168 2427958 1.63 2468126 44 44073 2422747 1.79 2466820 45 41395 2420187 1.68 2461582 46 43431 2408450 1.77 2451881 47 42255 2408704 1.72 2450959 48 43517 2410857 1.77 2454374 49 42038 2384993 1.73 2427031 50 43730 2381952 1.80 2425682 51 42767 2382836 1.76 2425603 52 42649 2379904 1.76 2422553 53 42137 2369942 1.75 2412079 54 43859 2348170 1.83 2392029 55 41350 2336195 1.74 2377545 56 42651 2325538 1.80 2368189 57 42519 2310876 1.81 2353395 58 42334 2286223 1.82 2328557 59 42511 2307078 1.81 2349589 60 42466 2306083 1.81 2348549 61 41776 2278064 1.80 2319840 62 44652 2243843 1.95 2288495 63 41306 2232064 1.82 2273370 64 43194 2203219 1.92 2246413 65 40769 2195560 1.82 2236329 66 43793 2186648 1.96 2230441 67 40178 2157256 1.83 2197434 68 42628 2143355 1.95 2185983 69 40888 2127492 1.89 2168380 70 42761 2100172 2.00 2142933 71 39954 2081623 1.88 2121577 72 42742 2045042 2.05 2087784 73 38688 2019360 1.88 2058048 74 43218 2000275 2.11 2043493 75 38780 1986486 1.91 2025266 76 41852 1964097 2.09 2005949 77 39151 1939533 1.98 1978684 78 42176 1920436 2.15 1962612 79 39010 1904753 2.01 1943763 80 40567 1886344 2.11 1926911 81 38308 1851939 2.03 1890247 82 39990 1813277 2.16 1853267 83 36918 1806141 2.00 1843059 84 40297 1792512 2.20 1832809 85 36728 1769166 2.03 1805894 86 39191 1753802 2.19 1792993 87 37211 1735791 2.10 1773002 88 37222 1687235 2.16 1724457 89 36795 1660102 2.17 1696897 90 37056 1647504 2.20 1684560 91 35001 1617021 2.12 1652022 92 35847 1603005 2.19 1638852 93 35187 1584226 2.17 1619413 94 35264 1545110 2.23 1580374 95 33767 1536606 2.15 1570373 96 34656 1507039 2.25 1541695 97 33242 1481894 2.19 1515136 98 33605 1461953 2.25 1495558 99 33057 1447402 2.23 1480459 100 32434 1417150 2.24 1449584 101 31637 1397677 2.21 1429314 102 32402 1376407 2.30 1408809 103 30439 1348014 2.21 1378453 104 31427 1331206 2.31 1362633 105 30190 1305856 2.26 1336046 106 30524 1280862 2.33 1311386 107 29464 1260569 2.28 1290033 108 29630 1241828 2.33 1271458 109 28491 1231309 2.26 1259800 110 29031 1200142 2.36 1229173 111 28289 1187365 2.33 1215654 112 28143 1168905 2.35 1197048 113 26989 1142599 2.31 1169588 114 28520 1132874 2.46 1161394 115 26115 1109016 2.30 1135131 116 27260 1089736 2.44 1116996 117 25995 1071364 2.37 1097359 118 26219 1052563 2.43 1078782 119 26040 1041663 2.44 1067703 120 25435 1028864 2.41 1054299 121 24082 1001464 2.35 1025546 122 25233 983185 2.50 1008418 123 23748 967248 2.40 990996 124 24559 943148 2.54 967707 125 23111 928564 2.43 951675 126 23866 908541 2.56 932407 127 22275 899765 2.42 922040 128 22751 884651 2.51 907402 129 22499 872813 2.51 895312 130 22301 853413 2.55 875714 131 21427 836762 2.50 858189 132 21878 826585 2.58 848463 133 20483 817558 2.44 838041 134 21372 802594 2.59 823966 135 20316 782936 2.53 803252 136 20437 768976 2.59 789413 137 20334 754264 2.63 774598 138 20199 742432 2.65 762631 139 19999 730153 2.67 750152 140 20082 716880 2.72 736962 141 20451 702184 2.83 722635 142 20614 691460 2.89 712074 143 20554 676137 2.95 696691 144 19167 645964 2.88 665131 145 13809 336122 3.95 349931 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 39712 28550 58.18 68262 2 39496 25430 60.83 64926 3 44644 24125 64.92 68769 4 46736 22652 67.35 69388 5 46633 21411 68.53 68044 6 50590 20276 71.39 70866 7 53695 19588 73.27 73283 8 52367 18997 73.38 71364 9 48915 18328 72.74 67243 10 47494 18285 72.20 65779 11 47707 17866 72.75 65573 12 45298 17315 72.35 62613 13 45286 16648 73.12 61934 14 45404 15863 74.11 61267 15 45579 16078 73.92 61657 16 45158 15482 74.47 60640 17 44305 15489 74.10 59794 18 44331 15288 74.36 59619 19 43210 15101 74.10 58311 20 40448 13999 74.29 54447 21 41819 13959 74.97 55778 22 40715 13574 75.00 54289 23 40169 13268 75.17 53437 24 38709 13305 74.42 52014 25 39034 13004 75.01 52038 26 37128 12262 75.17 49390 27 37070 11879 75.73 48949 28 36807 12089 75.28 48896 29 36812 11784 75.75 48596 30 36323 11402 76.11 47725 31 34682 11083 75.78 45765 32 33414 10584 75.94 43998 33 33105 10705 75.56 43810 34 32772 10119 76.41 42891 35 32042 10237 75.79 42279 36 31108 9924 75.81 41032 37 30797 9806 75.85 40603 38 29631 9461 75.80 39092 39 29194 9129 76.18 38323 40 28137 9063 75.64 37200 41 29214 9003 76.44 38217 42 27131 8398 76.36 35529 43 27655 8664 76.14 36319 44 26907 8375 76.26 35282 45 26046 7939 76.64 33985 46 25247 7840 76.30 33087 47 25551 7825 76.56 33376 48 25349 7736 76.62 33085 49 24439 7511 76.49 31950 50 23438 7276 76.31 30714 51 22961 7298 75.88 30259 52 22706 7237 75.83 29943 53 22580 6982 76.38 29562 54 21664 6829 76.03 28493 55 20917 6705 75.73 27622 56 20930 6675 75.82 27605 57 20649 6507 76.04 27156 58 20237 6439 75.86 26676 59 19896 6119 76.48 26015 60 19175 6046 76.03 25221 61 19243 6026 76.15 25269 62 18944 5796 76.57 24740 63 18633 5689 76.61 24322 64 17514 5553 75.93 23067 65 17491 5423 76.33 22914 66 17279 5389 76.23 22668 67 16812 5366 75.80 22178 68 16345 5235 75.74 21580 69 16477 5061 76.50 21538 70 15937 4951 76.30 20888 71 16012 4921 76.49 20933 72 15496 4941 75.82 20437 73 15016 4771 75.89 19787 74 15152 4577 76.80 19729 75 14919 4403 77.21 19322 76 14498 4366 76.86 18864 77 14655 4370 77.03 19025 78 13966 4237 76.72 18203 79 13660 4228 76.36 17888 80 13689 3990 77.43 17679 81 12744 3968 76.26 16712 82 12736 3980 76.19 16716 83 12550 3750 76.99 16300 84 12037 4004 75.04 16041 85 12222 3795 76.31 16017 86 11904 3747 76.06 15651 87 11559 3722 75.64 15281 88 11639 3535 76.70 15174 89 11681 3650 76.19 15331 90 11361 3472 76.59 14833 91 10846 3354 76.38 14200 92 10892 3365 76.40 14257 93 10649 3303 76.33 13952 94 10236 3197 76.20 13433 95 10214 3110 76.66 13324 96 9993 3142 76.08 13135 97 9905 3091 76.22 12996 98 9863 2914 77.19 12777 99 9399 2918 76.31 12317 100 9366 2870 76.54 12236 101 9166 2807 76.56 11973 102 9124 2799 76.52 11923 103 8869 2784 76.11 11653 104 8733 2712 76.30 11445 105 8507 2558 76.88 11065 106 8399 2527 76.87 10926 107 8205 2518 76.52 10723 108 8274 2536 76.54 10810 109 7625 2419 75.92 10044 110 7732 2370 76.54 10102 111 7407 2351 75.91 9758 112 7433 2273 76.58 9706 113 7224 2335 75.57 9559 114 7169 2362 75.22 9531 115 7153 2214 76.36 9367 116 7083 2223 76.11 9306 117 6619 2027 76.56 8646 118 6485 2160 75.01 8645 119 6632 2056 76.34 8688 120 6453 1991 76.42 8444 121 6382 1946 76.63 8328 122 6210 1925 76.34 8135 123 6140 1888 76.48 8028 124 6056 1834 76.76 7890 125 5893 1796 76.64 7689 126 5713 1849 75.55 7562 127 5673 1729 76.64 7402 128 5511 1747 75.93 7258 129 5462 1679 76.49 7141 130 5294 1731 75.36 7025 131 5489 1686 76.50 7175 132 5141 1662 75.57 6803 133 5140 1579 76.50 6719 134 4982 1521 76.61 6503 135 4905 1551 75.98 6456 136 4786 1573 75.26 6359 137 4571 1470 75.67 6041 138 4451 1410 75.94 5861 139 4396 1427 75.49 5823 140 4498 1436 75.80 5934 141 4327 1329 76.50 5656 142 4322 1409 75.41 5731 143 4068 1370 74.81 5438 144 3993 1309 75.31 5302 145 3110 548 85.02 3658 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 11879 333257 3.44 345136 2 10413 219348 4.53 229761 3 8683 200538 4.15 209221 4 5886 198686 2.88 204572 5 7777 195080 3.83 202857 6 10943 189147 5.47 200090 7 4677 189044 2.41 193721 8 4093 185722 2.16 189815 9 3724 179339 2.03 183063 10 3782 181317 2.04 185099 11 4334 178866 2.37 183200 12 3039 184608 1.62 187647 13 3259 168742 1.89 172001 14 2857 168101 1.67 170958 15 2840 165301 1.69 168141 16 2640 163951 1.58 166591 17 2514 157803 1.57 160317 18 2157 157861 1.35 160018 19 2168 154940 1.38 157108 20 1943 156469 1.23 158412 21 1830 151995 1.19 153825 22 1811 147505 1.21 149316 23 1645 147077 1.11 148722 24 1541 143036 1.07 144577 25 1424 141344 1.00 142768 26 1366 143213 0.94 144579 27 1214 134515 0.89 135729 28 1243 132495 0.93 133738 29 1125 132642 0.84 133767 30 1200 130572 0.91 131772 31 974 125721 0.77 126695 32 1129 126153 0.89 127282 33 921 123104 0.74 124025 34 981 120830 0.81 121811 35 841 120140 0.70 120981 36 1003 120089 0.83 121092 37 848 113575 0.74 114423 38 958 114475 0.83 115433 39 875 111043 0.78 111918 40 876 108494 0.80 109370 41 763 105140 0.72 105903 42 795 106452 0.74 107247 43 714 102129 0.69 102843 44 721 101917 0.70 102638 45 796 97974 0.81 98770 46 744 97108 0.76 97852 47 746 95723 0.77 96469 48 694 93695 0.74 94389 49 664 90889 0.73 91553 50 624 90887 0.68 91511 51 658 87149 0.75 87807 52 659 86665 0.75 87324 53 642 85407 0.75 86049 54 635 83560 0.75 84195 55 665 81159 0.81 81824 56 595 82572 0.72 83167 57 656 77595 0.84 78251 58 583 77950 0.74 78533 59 640 75409 0.84 76049 60 548 74893 0.73 75441 61 609 73483 0.82 74092 62 565 71920 0.78 72485 63 553 70320 0.78 70873 64 537 70349 0.76 70886 65 530 68060 0.77 68590 66 520 67041 0.77 67561 67 538 65835 0.81 66373 68 545 66557 0.81 67102 69 485 63190 0.76 63675 70 564 63088 0.89 63652 71 521 62028 0.83 62549 72 526 61991 0.84 62517 73 491 59812 0.81 60303 74 541 59102 0.91 59643 75 468 57198 0.81 57666 76 441 57532 0.76 57973 77 496 55477 0.89 55973 78 458 54339 0.84 54797 79 429 52621 0.81 53050 80 456 53664 0.84 54120 81 427 51243 0.83 51670 82 392 51099 0.76 51491 83 391 48945 0.79 49336 84 444 48900 0.90 49344 85 378 48061 0.78 48439 86 432 47454 0.90 47886 87 371 46515 0.79 46886 88 423 46606 0.90 47029 89 356 44121 0.80 44477 90 394 44513 0.88 44907 91 427 44871 0.94 45298 92 345 43400 0.79 43745 93 359 41468 0.86 41827 94 399 41078 0.96 41477 95 354 40477 0.87 40831 96 346 40165 0.85 40511 97 355 38993 0.90 39348 98 331 38627 0.85 38958 99 308 37757 0.81 38065 100 297 38288 0.77 38585 101 331 36583 0.90 36914 102 322 36019 0.89 36341 103 281 34650 0.80 34931 104 293 35613 0.82 35906 105 281 33599 0.83 33880 106 272 33796 0.80 34068 107 310 32754 0.94 33064 108 272 32946 0.82 33218 109 309 31903 0.96 32212 110 284 30887 0.91 31171 111 279 30453 0.91 30732 112 266 30630 0.86 30896 113 270 29180 0.92 29450 114 253 29736 0.84 29989 115 234 28629 0.81 28863 116 250 28382 0.87 28632 117 201 27611 0.72 27812 118 221 27278 0.80 27499 119 250 26740 0.93 26990 120 243 26572 0.91 26815 121 248 25576 0.96 25824 122 228 25712 0.88 25940 123 199 25097 0.79 25296 124 247 25210 0.97 25457 125 218 24529 0.88 24747 126 211 24098 0.87 24309 127 223 23272 0.95 23495 128 204 23383 0.86 23587 129 214 22665 0.94 22879 130 191 22412 0.85 22603 131 185 22209 0.83 22394 132 198 21796 0.90 21994 133 196 20636 0.94 20832 134 171 20884 0.81 21055 135 193 20350 0.94 20543 136 170 20269 0.83 20439 137 173 19458 0.88 19631 138 154 19077 0.80 19231 139 176 19101 0.91 19277 140 176 19054 0.92 19230 141 197 18399 1.06 18596 142 181 18416 0.97 18597 143 172 17633 0.97 17805 144 159 16595 0.95 16754 145 113 7500 1.48 7613 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 47500 586273 7.49 633773 2 40115 655870 5.76 695985 3 37181 631511 5.56 668692 4 28379 595239 4.55 623618 5 25164 560873 4.29 586037 6 25386 547447 4.43 572833 7 22756 521103 4.18 543859 8 20184 515052 3.77 535236 9 19716 500469 3.79 520185 10 19754 493497 3.85 513251 11 19987 487835 3.94 507822 12 16658 474979 3.39 491637 13 15488 461463 3.25 476951 14 15572 457091 3.29 472663 15 14919 452016 3.20 466935 16 14487 438496 3.20 452983 17 13276 427987 3.01 441263 18 13095 419955 3.02 433050 19 11891 413358 2.80 425249 20 11815 405585 2.83 417400 21 10928 409591 2.60 420519 22 10955 398148 2.68 409103 23 9996 391159 2.49 401155 24 10491 381833 2.67 392324 25 8776 378542 2.27 387318 26 9571 370944 2.52 380515 27 8531 371942 2.24 380473 28 8709 365643 2.33 374352 29 7797 356347 2.14 364144 30 8309 353328 2.30 361637 31 7037 347522 1.98 354559 32 7720 345032 2.19 352752 33 6718 340687 1.93 347405 34 7271 334594 2.13 341865 35 5973 328646 1.79 334619 36 6874 318649 2.11 325523 37 5868 310505 1.85 316373 38 6712 308435 2.13 315147 39 5778 304633 1.86 310411 40 6150 297048 2.03 303198 41 5697 292643 1.91 298340 42 6395 287588 2.18 293983 43 5299 280325 1.86 285624 44 6115 273738 2.19 279853 45 5419 271163 1.96 276582 46 5775 264572 2.14 270347 47 5180 262928 1.93 268108 48 5562 258709 2.10 264271 49 5141 253296 1.99 258437 50 5505 247085 2.18 252590 51 5089 244509 2.04 249598 52 5233 242598 2.11 247831 53 4831 238335 1.99 243166 54 5449 232321 2.29 237770 55 4639 226919 2.00 231558 56 5035 224295 2.20 229330 57 4650 220916 2.06 225566 58 4804 216270 2.17 221074 59 4576 215548 2.08 220124 60 4823 212917 2.22 217740 61 4220 206161 2.01 210381 62 4722 201579 2.29 206301 63 4194 197918 2.08 202112 64 4582 196655 2.28 201237 65 4023 192247 2.05 196270 66 4702 189152 2.43 193854 67 3808 187772 1.99 191580 68 4326 182413 2.32 186739 69 4059 180513 2.20 184572 70 4126 176608 2.28 180734 71 3706 172728 2.10 176434 72 4119 171681 2.34 175800 73 3520 166976 2.06 170496 74 4132 163790 2.46 167922 75 3554 163200 2.13 166754 76 3722 159741 2.28 163463 77 3496 156935 2.18 160431 78 3791 153468 2.41 157259 79 3302 151897 2.13 155199 80 3555 150719 2.30 154274 81 3311 146900 2.20 150211 82 3452 142586 2.36 146038 83 3165 142196 2.18 145361 84 3427 141007 2.37 144434 85 2984 137129 2.13 140113 86 3350 136277 2.40 139627 87 2986 135817 2.15 138803 88 3077 131185 2.29 134262 89 2875 129130 2.18 132005 90 3114 127118 2.39 130232 91 2672 124911 2.09 127583 92 2924 124161 2.30 127085 93 2731 122915 2.17 125646 94 2838 119336 2.32 122174 95 2513 116864 2.11 119377 96 2608 114496 2.23 117104 97 2482 113094 2.15 115576 98 2656 111431 2.33 114087 99 2492 109648 2.22 112140 100 2399 107516 2.18 109915 101 2290 106323 2.11 108613 102 2469 105273 2.29 107742 103 2193 103387 2.08 105580 104 2300 101784 2.21 104084 105 2099 99747 2.06 101846 106 2195 97828 2.19 100023 107 2079 96514 2.11 98593 108 2153 95109 2.21 97262 109 1965 94490 2.04 96455 110 2082 90961 2.24 93043 111 1857 90958 2.00 92815 112 1991 89249 2.18 91240 113 1770 87406 1.98 89176 114 2054 86307 2.32 88361 115 1722 84201 2.00 85923 116 1824 83255 2.14 85079 117 1742 82135 2.08 83877 118 1750 80823 2.12 82573 119 1699 79944 2.08 81643 120 1740 79269 2.15 81009 121 1576 76773 2.01 78349 122 1679 75626 2.17 77305 123 1542 74200 2.04 75742 124 1553 72713 2.09 74266 125 1480 71751 2.02 73231 126 1558 71022 2.15 72580 127 1344 70102 1.88 71446 128 1449 68611 2.07 70060 129 1444 67966 2.08 69410 130 1382 66515 2.04 67897 131 1312 65267 1.97 66579 132 1391 64674 2.11 66065 133 1169 63666 1.80 64835 134 1367 62621 2.14 63988 135 1245 60702 2.01 61947 136 1300 59880 2.12 61180 137 1244 60141 2.03 61385 138 1303 58453 2.18 59756 139 1193 58103 2.01 59296 140 1176 56373 2.04 57549 141 1145 54817 2.05 55962 142 1113 54459 2.00 55572 143 1073 53682 1.96 54755 144 1051 49875 2.06 50926 145 651 23389 2.71 24040