CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 182737 102855 63.99 285592 2 175656 93236 65.33 268892 3 203404 95613 68.02 299017 4 221432 93950 70.21 315382 5 220710 89921 71.05 310631 6 253161 85013 74.86 338174 7 277042 85272 76.46 362314 8 265290 83577 76.04 348867 9 259816 85798 75.18 345614 10 250135 83592 74.95 333727 11 255306 85619 74.89 340925 12 249352 83164 74.99 332516 13 254420 85132 74.93 339552 14 257734 82352 75.78 340086 15 269341 83990 76.23 353331 16 270907 83532 76.43 354439 17 275608 84147 76.61 359755 18 279012 85545 76.53 364557 19 274496 84449 76.47 358945 20 262690 80908 76.45 343598 21 275050 82795 76.86 357845 22 271045 81759 76.83 352804 23 267888 82237 76.51 350125 24 266131 81550 76.54 347681 25 269634 81962 76.69 351596 26 266551 81220 76.65 347771 27 265547 81157 76.59 346704 28 275967 81705 77.16 357672 29 270789 81192 76.93 351981 30 277315 82219 77.13 359534 31 269832 81225 76.86 351057 32 272858 80542 77.21 353400 33 275426 81150 77.24 356576 34 274988 81660 77.10 356648 35 272458 80752 77.14 353210 36 271705 79475 77.37 351180 37 271183 79921 77.24 351104 38 268963 78931 77.31 347894 39 273475 79895 77.39 353370 40 263614 78113 77.14 341727 41 271076 79722 77.27 350798 42 264956 78407 77.16 343363 43 268765 79377 77.20 348142 44 264729 78105 77.22 342834 45 264558 77068 77.44 341626 46 259718 76766 77.19 336484 47 266293 76917 77.59 343210 48 267152 77675 77.47 344827 49 262366 77312 77.24 339678 50 257138 76396 77.09 333534 51 262298 76928 77.32 339226 52 255313 76269 77.00 331582 53 260689 77640 77.05 338329 54 258305 75874 77.30 334179 55 254811 75470 77.15 330281 56 253652 74675 77.26 328327 57 255927 75252 77.28 331179 58 255754 77283 76.79 333037 59 250654 73848 77.24 324502 60 249619 74735 76.96 324354 61 247991 73222 77.20 321213 62 240405 71793 77.00 312198 63 246678 73226 77.11 319904 64 235207 71633 76.65 306840 65 235244 71657 76.65 306901 66 229804 71530 76.26 301334 67 231326 69624 76.87 300950 68 233377 69618 77.02 302995 69 232454 69288 77.04 301742 70 224164 67679 76.81 291843 71 221600 66731 76.86 288331 72 222108 67476 76.70 289584 73 221462 67637 76.60 289099 74 221549 66043 77.04 287592 75 219424 66036 76.87 285460 76 214854 65392 76.67 280246 77 218986 65371 77.01 284357 78 214410 64203 76.96 278613 79 208084 63678 76.57 271762 80 207032 63173 76.62 270205 81 199854 61712 76.41 261566 82 196668 60065 76.60 256733 83 196281 60186 76.53 256467 84 196543 60996 76.32 257539 85 194032 59907 76.41 253939 86 192819 58298 76.78 251117 87 189616 57514 76.73 247130 88 189299 57472 76.71 246771 89 189485 57468 76.73 246953 90 182924 56103 76.53 239027 91 180279 54956 76.64 235235 92 177882 54960 76.40 232842 93 172476 53653 76.27 226129 94 174647 53297 76.62 227944 95 172234 52543 76.62 224777 96 170238 52790 76.33 223028 97 166988 52049 76.24 219037 98 164648 50664 76.47 215312 99 160749 50299 76.17 211048 100 156295 48312 76.39 204607 101 154971 47909 76.39 202880 102 153757 47592 76.36 201349 103 154282 48477 76.09 202759 104 149646 47280 75.99 196926 105 149300 46801 76.13 196101 106 148064 46408 76.14 194472 107 144278 45305 76.10 189583 108 142967 45059 76.04 188026 109 137692 43705 75.91 181397 110 133925 42892 75.74 176817 111 134394 42415 76.01 176809 112 133168 42131 75.97 175299 113 128234 41422 75.58 169656 114 128549 41203 75.73 169752 115 125691 40193 75.77 165884 116 123597 39423 75.82 163020 117 119993 38961 75.49 158954 118 116196 37779 75.46 153975 119 114493 37475 75.34 151968 120 111994 37261 75.04 149255 121 110985 36320 75.34 147305 122 110807 35487 75.74 146294 123 108926 35536 75.40 144462 124 106845 35330 75.15 142175 125 104140 34246 75.25 138386 126 102375 33672 75.25 136047 127 99554 33371 74.89 132925 128 95767 32489 74.67 128256 129 95480 32381 74.67 127861 130 95267 32312 74.67 127579 131 95276 31860 74.94 127136 132 92624 30690 75.11 123314 133 90554 30430 74.85 120984 134 87713 29832 74.62 117545 135 86688 29415 74.66 116103 136 84646 28670 74.70 113316 137 83166 27974 74.83 111140 138 80892 27921 74.34 108813 139 80787 27893 74.33 108680 140 78668 27608 74.02 106276 141 77661 27406 73.92 105067 142 77359 27511 73.77 104870 143 74941 26102 74.17 101043 144 74069 25012 74.76 99081 145 62240 12381 83.41 74621 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 35290 1283037 2.68 1318327 2 30490 856401 3.44 886891 3 23549 827478 2.77 851027 4 17543 845229 2.03 862772 5 23072 843298 2.66 866370 6 33786 829789 3.91 863575 7 16307 848791 1.88 865098 8 16729 860000 1.91 876729 9 12791 846687 1.49 859478 10 12290 863348 1.40 875638 11 14799 882915 1.65 897714 12 10804 904547 1.18 915351 13 11820 870873 1.34 882693 14 10443 862168 1.20 872611 15 11969 882738 1.34 894707 16 10149 892804 1.12 902953 17 9696 865297 1.11 874993 18 8709 888317 0.97 897026 19 8617 893713 0.95 902330 20 8411 909969 0.92 918380 21 8055 891274 0.90 899329 22 7901 888141 0.88 896042 23 7697 890706 0.86 898403 24 7719 885909 0.86 893628 25 7253 892575 0.81 899828 26 7438 916285 0.81 923723 27 6877 875720 0.78 882597 28 7388 888279 0.82 895667 29 6880 892395 0.77 899275 30 7497 892865 0.83 900362 31 6396 877162 0.72 883558 32 7587 899208 0.84 906795 33 6623 890197 0.74 896820 34 7484 887431 0.84 894915 35 6541 884050 0.73 890591 36 7705 905006 0.84 912711 37 6662 883031 0.75 889693 38 7274 894903 0.81 902177 39 6488 882888 0.73 889376 40 7111 883596 0.80 890707 41 6686 882375 0.75 889061 42 7094 895422 0.79 902516 43 6814 896368 0.75 903182 44 7029 897403 0.78 904432 45 6989 879488 0.79 886477 46 7073 884932 0.79 892005 47 7074 865564 0.81 872638 48 6868 866400 0.79 873268 49 7308 866080 0.84 873388 50 7122 880966 0.80 888088 51 7503 854070 0.87 861573 52 7229 864712 0.83 871941 53 7729 861121 0.89 868850 54 7273 853244 0.85 860517 55 7868 843615 0.92 851483 56 7508 844322 0.88 851830 57 8143 823431 0.98 831574 58 7753 835370 0.92 843123 59 8111 823000 0.98 831111 60 7663 824927 0.92 832590 61 8284 809065 1.01 817349 62 7766 805913 0.95 813679 63 7961 798525 0.99 806486 64 7771 809506 0.95 817277 65 7892 790135 0.99 798027 66 8007 786242 1.01 794249 67 8012 779951 1.02 787963 68 8147 789584 1.02 797731 69 8103 772801 1.04 780904 70 8382 772343 1.07 780725 71 8105 760742 1.05 768847 72 8387 761828 1.09 770215 73 8364 742308 1.11 750672 74 8552 745966 1.13 754518 75 8324 739028 1.11 747352 76 8636 735137 1.16 743773 77 8202 718857 1.13 727059 78 8815 713697 1.22 722512 79 8180 704492 1.15 712672 80 8735 709987 1.22 718722 81 8405 689054 1.21 697459 82 8577 689229 1.23 697806 83 8298 676682 1.21 684980 84 8479 670726 1.25 679205 85 8472 661601 1.26 670073 86 8565 656952 1.29 665517 87 8124 642537 1.25 650661 88 8423 640371 1.30 648794 89 8085 619135 1.29 627220 90 7961 619490 1.27 627451 91 8367 613695 1.35 622062 92 8049 610609 1.30 618658 93 8178 593307 1.36 601485 94 7852 583686 1.33 591538 95 8008 579021 1.36 587029 96 7941 581937 1.35 589878 97 8099 572484 1.39 580583 98 8005 569218 1.39 577223 99 8106 562804 1.42 570910 100 7872 556493 1.39 564365 101 7927 534869 1.46 542796 102 7842 537680 1.44 545522 103 7989 519474 1.51 527463 104 7664 526741 1.43 534405 105 7526 504803 1.47 512329 106 7451 501895 1.46 509346 107 7589 498996 1.50 506585 108 7405 491576 1.48 498981 109 7372 478995 1.52 486367 110 7185 470838 1.50 478023 111 7188 460638 1.54 467826 112 7337 463242 1.56 470579 113 7018 447368 1.54 454386 114 6964 442147 1.55 449111 115 6931 437302 1.56 444233 116 6889 435063 1.56 441952 117 6520 421801 1.52 428321 118 6901 415251 1.63 422152 119 6556 409618 1.58 416174 120 6937 408397 1.67 415334 121 6600 399650 1.62 406250 122 6624 396010 1.65 402634 123 6402 384187 1.64 390589 124 6513 383826 1.67 390339 125 6470 374016 1.70 380486 126 6397 368913 1.70 375310 127 6106 361776 1.66 367882 128 6009 357154 1.65 363163 129 5849 344376 1.67 350225 130 6047 340880 1.74 346927 131 6062 335134 1.78 341196 132 5945 331523 1.76 337468 133 5771 321065 1.77 326836 134 5795 314959 1.81 320754 135 5777 307879 1.84 313656 136 5699 312551 1.79 318250 137 5464 299879 1.79 305343 138 5553 293945 1.85 299498 139 5749 290638 1.94 296387 140 5707 289179 1.94 294886 141 5921 284510 2.04 290431 142 6166 281403 2.14 287569 143 6294 271290 2.27 277584 144 6300 258879 2.38 265179 145 4835 131377 3.55 136212 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 149123 2216077 6.30 2365200 2 132425 2530344 4.97 2662769 3 122610 2500709 4.67 2623319 4 96696 2400096 3.87 2496792 5 84843 2306172 3.55 2391015 6 84807 2277967 3.59 2362774 7 76119 2225315 3.31 2301434 8 71533 2215430 3.13 2286963 9 70256 2189913 3.11 2260169 10 69724 2195165 3.08 2264889 11 70680 2226195 3.08 2296875 12 62781 2174686 2.81 2237467 13 59406 2149718 2.69 2209124 14 62490 2176100 2.79 2238590 15 63315 2174403 2.83 2237718 16 60507 2166530 2.72 2227037 17 58138 2139069 2.65 2197207 18 56877 2139528 2.59 2196405 19 54610 2143915 2.48 2198525 20 55571 2149484 2.52 2205055 21 52767 2186733 2.36 2239500 22 55595 2171844 2.50 2227439 23 50214 2185269 2.25 2235483 24 55037 2169834 2.47 2224871 25 47790 2180927 2.14 2228717 26 53493 2188215 2.39 2241708 27 47650 2221805 2.10 2269455 28 51770 2215129 2.28 2266899 29 46417 2211239 2.06 2257656 30 52022 2222657 2.29 2274679 31 43707 2220209 1.93 2263916 32 50369 2248046 2.19 2298415 33 43703 2244706 1.91 2288409 34 49703 2233055 2.18 2282758 35 42532 2250356 1.85 2292888 36 48976 2237386 2.14 2286362 37 42093 2212979 1.87 2255072 38 47591 2221483 2.10 2269074 39 43188 2241304 1.89 2284492 40 46590 2216628 2.06 2263218 41 43762 2228233 1.93 2271995 42 48066 2238867 2.10 2286933 43 43150 2214279 1.91 2257429 44 47409 2204418 2.11 2251827 45 44407 2208870 1.97 2253277 46 46729 2196470 2.08 2243199 47 44742 2202851 1.99 2247593 48 46566 2205518 2.07 2252084 49 45496 2180582 2.04 2226078 50 46022 2178725 2.07 2224747 51 45456 2172964 2.05 2218420 52 45360 2179846 2.04 2225206 53 45392 2164863 2.05 2210255 54 46361 2151300 2.11 2197661 55 44192 2144882 2.02 2189074 56 44771 2139363 2.05 2184134 57 44713 2122046 2.06 2166759 58 44871 2107484 2.08 2152355 59 45027 2123951 2.08 2168978 60 45166 2123445 2.08 2168611 61 44231 2102196 2.06 2146427 62 46629 2076727 2.20 2123356 63 44126 2060869 2.10 2104995 64 46096 2040574 2.21 2086670 65 43106 2031696 2.08 2074802 66 46846 2030020 2.26 2076866 67 42344 2007473 2.07 2049817 68 45393 1991337 2.23 2036730 69 43911 1981597 2.17 2025508 70 45916 1957694 2.29 2003610 71 42350 1941185 2.14 1983535 72 45530 1914479 2.32 1960009 73 41152 1893785 2.13 1934937 74 45677 1872864 2.38 1918541 75 41367 1863253 2.17 1904620 76 44320 1847978 2.34 1892298 77 41471 1824863 2.22 1866334 78 44574 1815687 2.40 1860261 79 41130 1798972 2.24 1840102 80 43372 1786065 2.37 1829437 81 40545 1752013 2.26 1792558 82 43455 1727437 2.45 1770892 83 39584 1716874 2.25 1756458 84 43345 1710771 2.47 1754116 85 39472 1686899 2.29 1726371 86 41792 1675923 2.43 1717715 87 39730 1663190 2.33 1702920 88 40425 1624554 2.43 1664979 89 39644 1601221 2.42 1640865 90 40302 1595699 2.46 1636001 91 37428 1564857 2.34 1602285 92 39093 1551270 2.46 1590363 93 38413 1536816 2.44 1575229 94 38623 1501211 2.51 1539834 95 36901 1488466 2.42 1525367 96 37555 1469256 2.49 1506811 97 35987 1449024 2.42 1485011 98 36902 1429559 2.52 1466461 99 36020 1416076 2.48 1452096 100 34855 1391026 2.44 1425881 101 34993 1375646 2.48 1410639 102 35683 1357634 2.56 1393317 103 33500 1335392 2.45 1368892 104 34466 1318915 2.55 1353381 105 33444 1297156 2.51 1330600 106 33606 1281384 2.56 1314990 107 32465 1256948 2.52 1289413 108 32946 1240685 2.59 1273631 109 31797 1231605 2.52 1263402 110 32480 1204264 2.63 1236744 111 30743 1188893 2.52 1219636 112 31640 1176803 2.62 1208443 113 30350 1153320 2.56 1183670 114 32039 1141711 2.73 1173750 115 29070 1117666 2.54 1146736 116 30515 1103055 2.69 1133570 117 29015 1087881 2.60 1116896 118 29277 1069061 2.67 1098338 119 28548 1059478 2.62 1088026 120 28766 1047678 2.67 1076444 121 27047 1021251 2.58 1048298 122 28251 1002253 2.74 1030504 123 26350 991311 2.59 1017661 124 27171 968551 2.73 995722 125 25630 957728 2.61 983358 126 27105 938816 2.81 965921 127 24999 926143 2.63 951142 128 25424 914810 2.70 940234 129 25398 901815 2.74 927213 130 25156 882470 2.77 907626 131 24293 868860 2.72 893153 132 24526 860620 2.77 885146 133 23699 851361 2.71 875060 134 24468 835830 2.84 860298 135 23157 814964 2.76 838121 136 22915 804412 2.77 827327 137 22817 791492 2.80 814309 138 23146 780523 2.88 803669 139 22512 769147 2.84 791659 140 22820 754208 2.94 777028 141 22950 741694 3.00 764644 142 23626 731650 3.13 755276 143 23136 715697 3.13 738833 144 21486 682722 3.05 704208 145 15670 346588 4.33 362258 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 43233 31449 57.89 74682 2 41991 28151 59.87 70142 3 47529 26546 64.16 74075 4 49803 25441 66.19 75244 5 50259 22742 68.85 73001 6 56280 21319 72.53 77599 7 63977 20902 75.37 84879 8 59500 19900 74.94 79400 9 52518 20013 72.41 72531 10 50947 19584 72.23 70531 11 51664 19764 72.33 71428 12 48959 19807 71.20 68766 13 49376 18202 73.07 67578 14 49394 17304 74.06 66698 15 50340 17112 74.63 67452 16 49514 16885 74.57 66399 17 48666 16815 74.32 65481 18 48855 16617 74.62 65472 19 47208 16165 74.49 63373 20 44808 15129 74.76 59937 21 46482 15045 75.55 61527 22 44879 14730 75.29 59609 23 44567 14547 75.39 59114 24 42574 13995 75.26 56569 25 42783 13721 75.72 56504 26 40914 13326 75.43 54240 27 40929 13233 75.57 54162 28 41163 13127 75.82 54290 29 40388 12761 75.99 53149 30 40259 12590 76.18 52849 31 38727 12262 75.95 50989 32 37662 11394 76.77 49056 33 37266 11593 76.27 48859 34 36401 11406 76.14 47807 35 35902 11283 76.09 47185 36 35090 10915 76.27 46005 37 34272 10612 76.36 44884 38 33460 10090 76.83 43550 39 33160 9902 77.01 43062 40 31834 9829 76.41 41663 41 32907 9690 77.25 42597 42 30712 9219 76.91 39931 43 31218 9613 76.46 40831 44 29864 9092 76.66 38956 45 29587 8831 77.01 38418 46 28866 8517 77.22 37383 47 29368 8556 77.44 37924 48 28859 8562 77.12 37421 49 27591 8179 77.13 35770 50 26516 8071 76.66 34587 51 26413 7990 76.78 34403 52 25690 7724 76.88 33414 53 25657 7701 76.91 33358 54 24921 7539 76.77 32460 55 24228 7429 76.53 31657 56 23935 7145 77.01 31080 57 23460 7181 76.56 30641 58 23081 7113 76.44 30194 59 22940 6827 77.07 29767 60 22175 6671 76.87 28846 61 22252 6625 77.06 28877 62 21658 6559 76.76 28217 63 21836 6410 77.31 28246 64 20184 6223 76.43 26407 65 19749 6021 76.64 25770 66 19770 6178 76.19 25948 67 19573 6048 76.39 25621 68 19039 5814 76.61 24853 69 18943 5678 76.94 24621 70 18649 5416 77.49 24065 71 18198 5284 77.50 23482 72 18190 5510 76.75 23700 73 17295 5271 76.64 22566 74 17593 5269 76.95 22862 75 17380 5033 77.54 22413 76 16569 4926 77.08 21495 77 17047 4949 77.50 21996 78 16659 4814 77.58 21473 79 15824 4743 76.94 20567 80 16184 4580 77.94 20764 81 15027 4531 76.83 19558 82 14791 4409 77.04 19200 83 14735 4486 76.66 19221 84 14248 4435 76.26 18683 85 14240 4219 77.14 18459 86 13896 4199 76.79 18095 87 13620 4150 76.65 17770 88 13482 4200 76.25 17682 89 13798 4003 77.51 17801 90 13366 3946 77.21 17312 91 12863 3798 77.20 16661 92 13048 4007 76.51 17055 93 12455 3686 77.16 16141 94 12235 3709 76.74 15944 95 12117 3578 77.20 15695 96 12046 3514 77.42 15560 97 11856 3493 77.24 15349 98 11452 3360 77.32 14812 99 11349 3356 77.18 14705 100 11359 3184 78.11 14543 101 10912 3238 77.12 14150 102 10599 3090 77.43 13689 103 10489 3161 76.84 13650 104 10260 3127 76.64 13387 105 10261 3040 77.14 13301 106 10228 2943 77.66 13171 107 9937 2942 77.16 12879 108 9639 2937 76.65 12576 109 9296 2790 76.92 12086 110 9156 2754 76.88 11910 111 9148 2814 76.48 11962 112 8937 2676 76.96 11613 113 8637 2566 77.10 11203 114 8687 2673 76.47 11360 115 8556 2607 76.65 11163 116 8412 2513 77.00 10925 117 8133 2463 76.76 10596 118 7966 2443 76.53 10409 119 8016 2455 76.55 10471 120 7718 2255 77.39 9973 121 7387 2182 77.20 9569 122 7512 2156 77.70 9668 123 7387 2283 76.39 9670 124 7283 2131 77.36 9414 125 7076 2238 75.97 9314 126 7070 2184 76.40 9254 127 6718 2121 76.00 8839 128 6640 2059 76.33 8699 129 6722 2032 76.79 8754 130 6452 2055 75.84 8507 131 6660 1867 78.10 8527 132 6126 1902 76.31 8028 133 6134 1909 76.27 8043 134 5950 1842 76.36 7792 135 5989 1914 75.78 7903 136 5706 1811 75.91 7517 137 5586 1662 77.07 7248 138 5570 1753 76.06 7323 139 5514 1674 76.71 7188 140 5337 1693 75.92 7030 141 5213 1685 75.57 6898 142 5190 1608 76.35 6798 143 5027 1600 75.86 6627 144 4916 1544 76.10 6460 145 3926 720 84.50 4646 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14720 347592 4.06 362312 2 12689 233865 5.15 246554 3 10579 214805 4.69 225384 4 7258 213124 3.29 220382 5 11481 210789 5.17 222270 6 17844 202676 8.09 220520 7 6497 204268 3.08 210765 8 6171 201524 2.97 207695 9 4477 199697 2.19 204174 10 4963 195775 2.47 200738 11 6781 194615 3.37 201396 12 3897 201618 1.90 205515 13 3956 185337 2.09 189293 14 3543 183817 1.89 187360 15 3553 179965 1.94 183518 16 3234 179832 1.77 183066 17 3006 173493 1.70 176499 18 2655 175372 1.49 178027 19 2525 170831 1.46 173356 20 2384 173167 1.36 175551 21 2186 167484 1.29 169670 22 2011 162343 1.22 164354 23 2021 161634 1.23 163655 24 1893 159305 1.17 161198 25 1602 156041 1.02 157643 26 1670 157978 1.05 159648 27 1475 149396 0.98 150871 28 1507 148475 1.00 149982 29 1388 148451 0.93 149839 30 1454 146211 0.98 147665 31 1212 139859 0.86 141071 32 1418 140771 1.00 142189 33 1205 136945 0.87 138150 34 1253 136652 0.91 137905 35 1095 135326 0.80 136421 36 1284 135026 0.94 136310 37 960 128120 0.74 129080 38 1168 129664 0.89 130832 39 941 125063 0.75 126004 40 1056 123317 0.85 124373 41 941 119270 0.78 120211 42 904 120392 0.75 121296 43 938 116546 0.80 117484 44 917 115523 0.79 116440 45 930 111397 0.83 112327 46 826 111228 0.74 112054 47 818 108425 0.75 109243 48 818 106449 0.76 107267 49 846 103889 0.81 104735 50 780 104029 0.74 104809 51 823 99629 0.82 100452 52 726 99266 0.73 99992 53 818 97613 0.83 98431 54 734 95850 0.76 96584 55 768 92955 0.82 93723 56 704 94473 0.74 95177 57 755 89216 0.84 89971 58 681 89728 0.75 90409 59 759 86464 0.87 87223 60 661 86405 0.76 87066 61 725 85187 0.84 85912 62 624 83823 0.74 84447 63 688 80707 0.85 81395 64 627 81117 0.77 81744 65 641 78362 0.81 79003 66 654 77307 0.84 77961 67 572 76307 0.74 76879 68 595 76263 0.77 76858 69 594 73749 0.80 74343 70 640 73456 0.86 74096 71 607 71875 0.84 72482 72 618 71708 0.85 72326 73 584 69434 0.83 70018 74 573 68240 0.83 68813 75 555 66849 0.82 67404 76 610 66179 0.91 66789 77 500 64195 0.77 64695 78 578 63871 0.90 64449 79 553 61861 0.89 62414 80 579 62554 0.92 63133 81 498 60531 0.82 61029 82 585 60116 0.96 60701 83 451 57840 0.77 58291 84 551 57853 0.94 58404 85 475 56142 0.84 56617 86 486 56221 0.86 56707 87 463 54322 0.85 54785 88 484 54741 0.88 55225 89 460 52139 0.87 52599 90 476 52098 0.91 52574 91 439 52435 0.83 52874 92 457 51237 0.88 51694 93 433 49064 0.87 49497 94 440 48624 0.90 49064 95 422 47986 0.87 48408 96 403 47932 0.83 48335 97 414 46388 0.88 46802 98 411 45800 0.89 46211 99 463 45225 1.01 45688 100 410 45431 0.89 45841 101 416 43447 0.95 43863 102 415 43234 0.95 43649 103 366 41253 0.88 41619 104 364 42171 0.86 42535 105 370 39704 0.92 40074 106 338 40166 0.83 40504 107 343 39689 0.86 40032 108 340 38739 0.87 39079 109 336 37638 0.88 37974 110 301 37191 0.80 37492 111 334 36670 0.90 37004 112 356 36557 0.96 36913 113 296 35264 0.83 35560 114 349 35114 0.98 35463 115 313 34204 0.91 34517 116 323 34058 0.94 34381 117 305 32988 0.92 33293 118 288 32683 0.87 32971 119 292 32005 0.90 32297 120 282 31856 0.88 32138 121 297 30836 0.95 31133 122 293 30839 0.94 31132 123 218 29817 0.73 30035 124 295 30566 0.96 30861 125 278 29154 0.94 29432 126 264 29161 0.90 29425 127 298 28245 1.04 28543 128 279 27895 0.99 28174 129 246 27369 0.89 27615 130 271 26838 1.00 27109 131 218 26476 0.82 26694 132 232 26312 0.87 26544 133 220 25488 0.86 25708 134 237 25538 0.92 25775 135 232 24488 0.94 24720 136 232 24750 0.93 24982 137 217 23659 0.91 23876 138 217 23438 0.92 23655 139 213 23297 0.91 23510 140 223 23007 0.96 23230 141 213 22558 0.94 22771 142 231 22131 1.03 22362 143 198 21385 0.92 21583 144 207 20205 1.01 20412 145 145 9768 1.46 9913 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 62562 617131 9.20 679693 2 48646 696969 6.52 745615 3 48264 663690 6.78 711954 4 32097 632809 4.83 664906 5 28273 596713 4.52 624986 6 30520 574538 5.04 605058 7 27144 549632 4.71 576776 8 23755 544143 4.18 567898 9 22386 533948 4.02 556334 10 24087 528309 4.36 552396 11 26746 519480 4.90 546226 12 19282 508729 3.65 528011 13 18167 491912 3.56 510079 14 18591 490093 3.65 508684 15 17862 485809 3.55 503671 16 16982 471624 3.48 488606 17 15575 463350 3.25 478925 18 15152 454801 3.22 469953 19 13555 449508 2.93 463063 20 13804 443496 3.02 457300 21 12839 449028 2.78 461867 22 12808 435582 2.86 448390 23 11351 430167 2.57 441518 24 12337 421716 2.84 434053 25 10236 419443 2.38 429679 26 11236 410268 2.67 421504 27 9919 410631 2.36 420550 28 10350 404838 2.49 415188 29 9025 397343 2.22 406368 30 9937 391310 2.48 401247 31 8139 386437 2.06 394576 32 9150 384331 2.33 393481 33 7815 379502 2.02 387317 34 8779 372420 2.30 381199 35 7065 367029 1.89 374094 36 8193 356940 2.24 365133 37 6792 348718 1.91 355510 38 7754 346314 2.19 354068 39 6708 341726 1.93 348434 40 7352 333894 2.15 341246 41 6525 330205 1.94 336730 42 7509 324422 2.26 331931 43 6152 315610 1.91 321762 44 7263 309405 2.29 316668 45 6247 306481 2.00 312728 46 6809 300114 2.22 306923 47 6182 296983 2.04 303165 48 6701 293241 2.23 299942 49 6108 287057 2.08 293165 50 6325 280693 2.20 287018 51 5788 277587 2.04 283375 52 6011 276315 2.13 282326 53 5840 270482 2.11 276322 54 6277 265036 2.31 271313 55 5295 259603 2.00 264898 56 5753 257178 2.19 262931 57 5476 252583 2.12 258059 58 5555 246718 2.20 252273 59 5398 245340 2.15 250738 60 5390 242818 2.17 248208 61 5017 237794 2.07 242811 62 5444 230796 2.30 236240 63 4931 227432 2.12 232363 64 5200 226237 2.25 231437 65 4830 221825 2.13 226655 66 5352 218181 2.39 223533 67 4577 216145 2.07 220722 68 4998 210667 2.32 215665 69 4762 207855 2.24 212617 70 4772 204167 2.28 208939 71 4274 200752 2.08 205026 72 4807 198639 2.36 203446 73 4072 193155 2.06 197227 74 4835 190480 2.48 195315 75 4049 189345 2.09 193394 76 4474 185719 2.35 190193 77 3997 182406 2.14 186403 78 4555 178424 2.49 182979 79 3798 176982 2.10 180780 80 4298 174566 2.40 178864 81 3722 171786 2.12 175508 82 4164 167415 2.43 171579 83 3523 166670 2.07 170193 84 4193 164331 2.49 168524 85 3471 161555 2.10 165026 86 3877 159079 2.38 162956 87 3495 158929 2.15 162424 88 3646 154583 2.30 158229 89 3436 151516 2.22 154952 90 3689 149290 2.41 152979 91 3138 147373 2.08 150511 92 3442 145546 2.31 148988 93 3239 143854 2.20 147093 94 3434 140630 2.38 144064 95 3035 138214 2.15 141249 96 3333 135697 2.40 139030 97 3004 133775 2.20 136779 98 3118 132860 2.29 135978 99 2952 129921 2.22 132873 100 2907 127508 2.23 130415 101 2768 125512 2.16 128280 102 2945 124300 2.31 127245 103 2640 121464 2.13 124104 104 2844 120548 2.30 123392 105 2567 118442 2.12 121009 106 2713 115922 2.29 118635 107 2372 114402 2.03 116774 108 2690 113002 2.33 115692 109 2452 111377 2.15 113829 110 2462 109169 2.21 111631 111 2374 108160 2.15 110534 112 2320 106759 2.13 109079 113 2214 105065 2.06 107279 114 2524 102301 2.41 104825 115 2098 99961 2.06 102059 116 2293 99746 2.25 102039 117 2058 98186 2.05 100244 118 2242 96129 2.28 98371 119 1987 95573 2.04 97560 120 2207 94940 2.27 97147 121 1937 92057 2.06 93994 122 2012 91027 2.16 93039 123 1917 89767 2.09 91684 124 1909 87723 2.13 89632 125 1753 86451 1.99 88204 126 1934 85450 2.21 87384 127 1619 83732 1.90 85351 128 1770 83074 2.09 84844 129 1818 81979 2.17 83797 130 1791 80507 2.18 82298 131 1582 78995 1.96 80577 132 1762 77745 2.22 79507 133 1556 76671 1.99 78227 134 1716 75504 2.22 77220 135 1494 74191 1.97 75685 136 1567 73063 2.10 74630 137 1510 72187 2.05 73697 138 1567 70682 2.17 72249 139 1434 70084 2.01 71518 140 1509 68657 2.15 70166 141 1419 67492 2.06 68911 142 1513 66141 2.24 67654 143 1269 65238 1.91 66507 144 1253 61125 2.01 62378 145 845 29732 2.76 30577