CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 196715 106856 64.80 303571 2 190545 97838 66.07 288383 3 213265 101227 67.81 314492 4 231641 98547 70.15 330188 5 233902 94165 71.30 328067 6 259241 92596 73.68 351837 7 271646 93212 74.45 364858 8 278229 91513 75.25 369742 9 275120 93217 74.69 368337 10 266396 90996 74.54 357392 11 269879 90808 74.82 360687 12 267450 89152 75.00 356602 13 273079 93058 74.58 366137 14 276391 90238 75.39 366629 15 286794 92733 75.57 379527 16 285995 91298 75.80 377293 17 292164 92786 75.90 384950 18 292917 93246 75.85 386163 19 287520 92509 75.66 380029 20 277562 88787 75.76 366349 21 290712 92734 75.82 383446 22 288589 91478 75.93 380067 23 289029 92564 75.74 381593 24 285774 92704 75.51 378478 25 289491 93037 75.68 382528 26 281322 90960 75.57 372282 27 280564 90833 75.54 371397 28 293416 92443 76.04 385859 29 287261 90966 75.95 378227 30 295315 93090 76.03 388405 31 287293 91537 75.84 378830 32 291897 91815 76.07 383712 33 292123 92880 75.88 385003 34 295280 91860 76.27 387140 35 291805 91837 76.06 383642 36 290098 91133 76.10 381231 37 288995 91302 75.99 380297 38 287706 89543 76.26 377249 39 288569 90124 76.20 378693 40 280642 90018 75.71 370660 41 291234 90041 76.38 381275 42 283693 88996 76.12 372689 43 285325 89796 76.06 375121 44 282458 89022 76.04 371480 45 280757 87772 76.18 368529 46 273295 88226 75.60 361521 47 281580 86491 76.50 368071 48 280896 86783 76.40 367679 49 278835 87054 76.21 365889 50 270121 85708 75.91 355829 51 275077 85592 76.27 360669 52 271030 84321 76.27 355351 53 273995 85588 76.20 359583 54 270936 84334 76.26 355270 55 270273 83904 76.31 354177 56 266309 82413 76.37 348722 57 266550 83065 76.24 349615 58 266470 84125 76.01 350595 59 259234 81534 76.07 340768 60 257278 81959 75.84 339237 61 256390 81094 75.97 337484 62 249478 78266 76.12 327744 63 255169 79370 76.27 334539 64 244713 77758 75.89 322471 65 241228 77021 75.80 318249 66 235534 76729 75.43 312263 67 235779 75891 75.65 311670 68 238420 74657 76.15 313077 69 236887 74648 76.04 311535 70 227181 72636 75.77 299817 71 223547 71488 75.77 295035 72 224798 71391 75.90 296189 73 220679 71405 75.55 292084 74 222475 70109 76.04 292584 75 218793 68987 76.03 287780 76 214421 68761 75.72 283182 77 217326 67628 76.27 284954 78 210547 67379 75.76 277926 79 206499 66442 75.66 272941 80 203533 64925 75.82 268458 81 194720 63366 75.45 258086 82 191543 61727 75.63 253270 83 189989 61736 75.47 251725 84 188469 61412 75.42 249881 85 185378 59805 75.61 245183 86 185014 58632 75.94 243646 87 181241 58541 75.59 239782 88 181032 57375 75.93 238407 89 180189 57534 75.80 237723 90 173688 55458 75.80 229146 91 167800 54949 75.33 222749 92 165114 53741 75.44 218855 93 160919 52908 75.26 213827 94 161515 52177 75.58 213692 95 160234 51162 75.80 211396 96 155799 50637 75.47 206436 97 154131 50097 75.47 204228 98 150901 48862 75.54 199763 99 146560 47953 75.35 194513 100 141770 46339 75.37 188109 101 140138 45717 75.40 185855 102 138497 45530 75.26 184027 103 137907 45301 75.27 183208 104 134437 43862 75.40 178299 105 132463 43255 75.38 175718 106 131987 42480 75.65 174467 107 127009 41947 75.17 168956 108 124973 40979 75.31 165952 109 119142 40187 74.78 159329 110 115559 39237 74.65 154796 111 116094 38642 75.03 154736 112 114513 38297 74.94 152810 113 110121 37135 74.78 147256 114 109495 37354 74.56 146849 115 107730 35875 75.02 143605 116 104738 35416 74.73 140154 117 101334 34548 74.57 135882 118 98203 33528 74.55 131731 119 97521 33368 74.51 130889 120 94678 32852 74.24 127530 121 93228 31663 74.65 124891 122 92565 31099 74.85 123664 123 90095 30607 74.64 120702 124 89483 30609 74.51 120092 125 86189 29440 74.54 115629 126 83974 29087 74.27 113061 127 81278 28438 74.08 109716 128 78506 27544 74.03 106050 129 77783 27776 73.69 105559 130 76446 27597 73.48 104043 131 77075 27048 74.02 104123 132 74056 26079 73.96 100135 133 72246 25899 73.61 98145 134 70087 25029 73.69 95116 135 68498 24077 73.99 92575 136 67360 23718 73.96 91078 137 65625 23741 73.43 89366 138 63750 23359 73.18 87109 139 63281 22860 73.46 86141 140 61284 22557 73.10 83841 141 60038 22308 72.91 82346 142 58982 22128 72.72 81110 143 57929 21239 73.17 79168 144 56777 20169 73.79 76946 145 47642 10352 82.15 57994 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 35064 1325742 2.58 1360806 2 30949 919024 3.26 949973 3 23693 891756 2.59 915449 4 17149 898117 1.87 915266 5 18057 903740 1.96 921797 6 20638 902299 2.24 922937 7 13543 920883 1.45 934426 8 11836 933292 1.25 945128 9 12026 914463 1.30 926489 10 10743 928591 1.14 939334 11 12836 949560 1.33 962396 12 10092 971498 1.03 981590 13 11506 938743 1.21 950249 14 9685 926898 1.03 936583 15 10804 942390 1.13 953194 16 8917 956728 0.92 965645 17 9056 928555 0.97 937611 18 8080 950134 0.84 958214 19 8346 956426 0.87 964772 20 8022 973996 0.82 982018 21 7802 951472 0.81 959274 22 7717 949622 0.81 957339 23 7545 953370 0.79 960915 24 7470 951455 0.78 958925 25 7034 950553 0.73 957587 26 7783 975696 0.79 983479 27 6624 936036 0.70 942660 28 7465 945892 0.78 953357 29 6635 955022 0.69 961657 30 7596 948945 0.79 956541 31 6551 938469 0.69 945020 32 7755 957581 0.80 965336 33 6717 946930 0.70 953647 34 7805 944021 0.82 951826 35 6684 942483 0.70 949167 36 8024 963791 0.83 971815 37 6915 943307 0.73 950222 38 7856 949273 0.82 957129 39 7005 937584 0.74 944589 40 7863 938058 0.83 945921 41 7018 937321 0.74 944339 42 7768 952151 0.81 959919 43 7354 954483 0.76 961837 44 7799 948448 0.82 956247 45 7730 932876 0.82 940606 46 7978 940045 0.84 948023 47 7888 921829 0.85 929717 48 7748 920848 0.83 928596 49 8068 919117 0.87 927185 50 8000 926232 0.86 934232 51 8493 902823 0.93 911316 52 7917 911428 0.86 919345 53 8858 905606 0.97 914464 54 8229 896710 0.91 904939 55 8854 886157 0.99 895011 56 8355 881871 0.94 890226 57 9504 865842 1.09 875346 58 8965 874105 1.02 883070 59 9236 862277 1.06 871513 60 8528 858293 0.98 866821 61 9412 840577 1.11 849989 62 8968 834558 1.06 843526 63 9270 831006 1.10 840276 64 8831 830285 1.05 839116 65 9393 813755 1.14 823148 66 9163 808373 1.12 817536 67 9028 799127 1.12 808155 68 9546 805739 1.17 815285 69 9289 787950 1.17 797239 70 9705 785826 1.22 795531 71 9469 770255 1.21 779724 72 9845 768891 1.26 778736 73 9352 751126 1.23 760478 74 9750 753154 1.28 762904 75 9434 739481 1.26 748915 76 10114 733936 1.36 744050 77 9319 714997 1.29 724316 78 9892 705098 1.38 714990 79 9211 697083 1.30 706294 80 10137 697900 1.43 708037 81 9379 675509 1.37 684888 82 9816 672586 1.44 682402 83 9442 659850 1.41 669292 84 9482 651918 1.43 661400 85 9360 640494 1.44 649854 86 9526 633967 1.48 643493 87 9354 615669 1.50 625023 88 9112 612930 1.46 622042 89 8987 592246 1.49 601233 90 9143 591272 1.52 600415 91 9139 582222 1.55 591361 92 9108 573744 1.56 582852 93 8656 556529 1.53 565185 94 8869 546443 1.60 555312 95 8628 538034 1.58 546662 96 8578 541315 1.56 549893 97 8600 526241 1.61 534841 98 8490 522831 1.60 531321 99 8969 517619 1.70 526588 100 8466 507318 1.64 515784 101 8434 485925 1.71 494359 102 8144 483124 1.66 491268 103 8226 468296 1.73 476522 104 8304 472707 1.73 481011 105 8066 450645 1.76 458711 106 7673 446373 1.69 454046 107 7707 440583 1.72 448290 108 7619 435679 1.72 443298 109 7557 423300 1.75 430857 110 7402 413434 1.76 420836 111 7446 403601 1.81 411047 112 7476 401805 1.83 409281 113 7187 386469 1.83 393656 114 7347 382218 1.89 389565 115 6979 375834 1.82 382813 116 7263 374874 1.90 382137 117 6702 359747 1.83 366449 118 6752 353689 1.87 360441 119 6666 348103 1.88 354769 120 6737 347054 1.90 353791 121 6586 335929 1.92 342515 122 6751 330817 2.00 337568 123 6355 319922 1.95 326277 124 6745 318058 2.08 324803 125 6266 309717 1.98 315983 126 6388 305511 2.05 311899 127 6003 297991 1.97 303994 128 5884 291436 1.98 297320 129 5784 279531 2.03 285315 130 5703 277408 2.01 283111 131 5545 273310 1.99 278855 132 5653 267036 2.07 272689 133 5528 256894 2.11 262422 134 5445 249253 2.14 254698 135 5400 244433 2.16 249833 136 5501 245871 2.19 251372 137 5293 237648 2.18 242941 138 5264 231843 2.22 237107 139 5256 227986 2.25 233242 140 5457 223762 2.38 229219 141 5753 222302 2.52 228055 142 5758 217537 2.58 223295 143 6073 208892 2.83 214965 144 5987 198428 2.93 204415 145 4462 106671 4.02 111133 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 166837 2445008 6.39 2611845 2 154438 2737982 5.34 2892420 3 139706 2712991 4.90 2852697 4 117728 2603518 4.33 2721246 5 106036 2507303 4.06 2613339 6 98418 2488165 3.80 2586583 7 90289 2432019 3.58 2522308 8 83026 2410178 3.33 2493204 9 82498 2366907 3.37 2449405 10 76954 2360422 3.16 2437376 11 76216 2383444 3.10 2459660 12 71368 2331730 2.97 2403098 13 68119 2303977 2.87 2372096 14 69227 2309874 2.91 2379101 15 69094 2300404 2.92 2369498 16 67134 2287521 2.85 2354655 17 65441 2254925 2.82 2320366 18 66522 2261029 2.86 2327551 19 62765 2256192 2.71 2318957 20 65397 2243210 2.83 2308607 21 61111 2275582 2.62 2336693 22 66062 2262049 2.84 2328111 23 58960 2273117 2.53 2332077 24 66011 2261257 2.84 2327268 25 56984 2268148 2.45 2325132 26 64871 2289919 2.75 2354790 27 57047 2316269 2.40 2373316 28 63353 2309342 2.67 2372695 29 55597 2300902 2.36 2356499 30 63752 2319775 2.67 2383527 31 53658 2312185 2.27 2365843 32 62035 2349406 2.57 2411441 33 53617 2336265 2.24 2389882 34 61145 2329989 2.56 2391134 35 52878 2344131 2.21 2397009 36 60715 2327553 2.54 2388268 37 52809 2315504 2.23 2368313 38 60091 2318395 2.53 2378486 39 55247 2341483 2.31 2396730 40 57899 2320320 2.43 2378219 41 54925 2329903 2.30 2384828 42 60222 2330376 2.52 2390598 43 55049 2311829 2.33 2366878 44 59470 2313298 2.51 2372768 45 57196 2309365 2.42 2366561 46 58548 2297760 2.48 2356308 47 57089 2302798 2.42 2359887 48 58202 2303004 2.46 2361206 49 58074 2285219 2.48 2343293 50 58412 2279491 2.50 2337903 51 58557 2270276 2.51 2328833 52 57673 2263702 2.48 2321375 53 58377 2255933 2.52 2314310 54 59441 2234095 2.59 2293536 55 57122 2224552 2.50 2281674 56 57711 2217672 2.54 2275383 57 57735 2205981 2.55 2263716 58 57679 2177571 2.58 2235250 59 57882 2192022 2.57 2249904 60 58780 2185880 2.62 2244660 61 57182 2161639 2.58 2218821 62 60735 2127952 2.77 2188687 63 56855 2112273 2.62 2169128 64 58878 2086452 2.74 2145330 65 55672 2072133 2.62 2127805 66 59587 2058806 2.81 2118393 67 54103 2036901 2.59 2091004 68 58766 2011666 2.84 2070432 69 55533 2001077 2.70 2056610 70 58893 1970993 2.90 2029886 71 53558 1947195 2.68 2000753 72 58280 1915624 2.95 1973904 73 52285 1890389 2.69 1942674 74 58263 1867674 3.03 1925937 75 52355 1847097 2.76 1899452 76 56763 1824139 3.02 1880902 77 52241 1798641 2.82 1850882 78 56412 1782030 3.07 1838442 79 51806 1762065 2.86 1813871 80 54287 1738639 3.03 1792926 81 50700 1711766 2.88 1762466 82 53464 1669365 3.10 1722829 83 49219 1660761 2.88 1709980 84 53356 1646863 3.14 1700219 85 48848 1618979 2.93 1667827 86 51747 1599592 3.13 1651339 87 48578 1577489 2.99 1626067 88 48930 1532028 3.09 1580958 89 47874 1506393 3.08 1554267 90 48396 1491289 3.14 1539685 91 45657 1462090 3.03 1507747 92 47037 1440986 3.16 1488023 93 45635 1421967 3.11 1467602 94 45643 1385293 3.19 1430936 95 44428 1374091 3.13 1418519 96 43808 1344980 3.15 1388788 97 42748 1325118 3.13 1367866 98 42827 1298834 3.19 1341661 99 42135 1284717 3.18 1326852 100 41323 1254662 3.19 1295985 101 40543 1235581 3.18 1276124 102 40802 1213631 3.25 1254433 103 38698 1188361 3.15 1227059 104 39246 1170619 3.24 1209865 105 37900 1144763 3.20 1182663 106 38039 1124741 3.27 1162780 107 36499 1101827 3.21 1138326 108 37170 1082617 3.32 1119787 109 35471 1071335 3.20 1106806 110 35912 1044179 3.32 1080091 111 34522 1028693 3.25 1063215 112 35235 1009499 3.37 1044734 113 32718 987008 3.21 1019726 114 34660 973987 3.44 1008647 115 31541 951979 3.21 983520 116 33268 934561 3.44 967829 117 31461 916787 3.32 948248 118 31963 897059 3.44 929022 119 30277 885493 3.31 915770 120 30955 871847 3.43 902802 121 28363 849618 3.23 877981 122 29975 833699 3.47 863674 123 27974 817718 3.31 845692 124 28659 795374 3.48 824033 125 27057 781683 3.35 808740 126 27836 765531 3.51 793367 127 26083 754663 3.34 780746 128 26484 739242 3.46 765726 129 25882 727409 3.44 753291 130 25742 710252 3.50 735994 131 25026 697920 3.46 722946 132 25165 685931 3.54 711096 133 23687 674017 3.39 697704 134 24302 661898 3.54 686200 135 23368 644566 3.50 667934 136 23048 631609 3.52 654657 137 22817 619987 3.55 642804 138 22555 605789 3.59 628344 139 22548 594322 3.66 616870 140 22546 582963 3.72 605509 141 22849 570537 3.85 593386 142 23097 561073 3.95 584170 143 23014 547487 4.03 570501 144 20924 520923 3.86 541847 145 15162 275638 5.21 290800 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 31168 23557 56.95 54725 2 30679 21159 59.18 51838 3 34622 20336 63.00 54958 4 36236 19281 65.27 55517 5 35687 17483 67.12 53170 6 38919 16268 70.52 55187 7 41304 15801 72.33 57105 8 41302 15237 73.05 56539 9 38651 14909 72.16 53560 10 37869 14534 72.26 52403 11 37955 14086 72.93 52041 12 36184 13627 72.64 49811 13 36381 13302 73.23 49683 14 36148 12906 73.69 49054 15 36357 12759 74.02 49116 16 35421 12549 73.84 47970 17 35124 12529 73.71 47653 18 35403 12466 73.96 47869 19 33427 11911 73.73 45338 20 32031 11000 74.44 43031 21 32536 10923 74.87 43459 22 31806 10721 74.79 42527 23 31566 10971 74.21 42537 24 29991 10242 74.54 40233 25 30047 10404 74.28 40451 26 28961 9534 75.23 38495 27 28338 9663 74.57 38001 28 29048 9633 75.10 38681 29 28058 9379 74.95 37437 30 28013 9337 75.00 37350 31 26392 8996 74.58 35388 32 26065 8359 75.72 34424 33 26076 8434 75.56 34510 34 25032 8184 75.36 33216 35 23986 7948 75.11 31934 36 23757 7865 75.13 31622 37 23605 7809 75.14 31414 38 22858 7385 75.58 30243 39 22439 7324 75.39 29763 40 21406 7047 75.23 28453 41 22049 7111 75.61 29160 42 20939 6649 75.90 27588 43 20851 6708 75.66 27559 44 20238 6633 75.32 26871 45 19692 6249 75.91 25941 46 19179 6197 75.58 25376 47 19313 6132 75.90 25445 48 19197 5865 76.60 25062 49 18521 6016 75.48 24537 50 17526 5753 75.29 23279 51 17404 5928 74.59 23332 52 16937 5406 75.80 22343 53 17038 5570 75.36 22608 54 16671 5238 76.09 21909 55 16271 5100 76.14 21371 56 15865 5087 75.72 20952 57 15706 5069 75.60 20775 58 15373 4845 76.04 20218 59 14859 4885 75.26 19744 60 14511 4700 75.53 19211 61 14463 4551 76.07 19014 62 14334 4641 75.54 18975 63 14085 4467 75.92 18552 64 13077 4237 75.53 17314 65 12575 4131 75.27 16706 66 12962 4141 75.79 17103 67 12609 4026 75.80 16635 68 12392 3923 75.95 16315 69 12317 3944 75.75 16261 70 11918 3764 76.00 15682 71 11674 3675 76.06 15349 72 11723 3602 76.50 15325 73 11280 3647 75.57 14927 74 10923 3448 76.01 14371 75 11058 3574 75.57 14632 76 10866 3322 76.59 14188 77 10770 3344 76.31 14114 78 10777 3300 76.56 14077 79 10209 3159 76.37 13368 80 10349 3115 76.86 13464 81 9717 3073 75.97 12790 82 9358 2977 75.87 12335 83 9403 2833 76.85 12236 84 8955 2964 75.13 11919 85 9043 2852 76.02 11895 86 8962 2811 76.12 11773 87 8791 2782 75.96 11573 88 8391 2579 76.49 10970 89 8729 2604 77.02 11333 90 8409 2419 77.66 10828 91 8113 2496 76.47 10609 92 8040 2456 76.60 10496 93 7815 2342 76.94 10157 94 7617 2338 76.51 9955 95 7489 2336 76.22 9825 96 7277 2221 76.62 9498 97 7278 2330 75.75 9608 98 7177 2209 76.46 9386 99 6835 2081 76.66 8916 100 6893 2099 76.66 8992 101 6608 1968 77.05 8576 102 6414 1990 76.32 8404 103 6621 2024 76.59 8645 104 6312 1930 76.58 8242 105 6096 1948 75.78 8044 106 6287 1915 76.65 8202 107 6010 1800 76.95 7810 108 5871 1829 76.25 7700 109 5673 1710 76.84 7383 110 5572 1677 76.87 7249 111 5411 1763 75.43 7174 112 5372 1648 76.52 7020 113 5218 1765 74.72 6983 114 5163 1752 74.66 6915 115 5046 1561 76.37 6607 116 5054 1508 77.02 6562 117 4846 1460 76.85 6306 118 4703 1448 76.46 6151 119 4640 1408 76.72 6048 120 4554 1428 76.13 5982 121 4598 1430 76.28 6028 122 4318 1365 75.98 5683 123 4330 1319 76.65 5649 124 4308 1302 76.79 5610 125 4112 1290 76.12 5402 126 4063 1342 75.17 5405 127 3934 1238 76.06 5172 128 3992 1214 76.68 5206 129 3864 1186 76.51 5050 130 3887 1234 75.90 5121 131 3631 1152 75.91 4783 132 3646 1197 75.28 4843 133 3573 1095 76.54 4668 134 3570 1089 76.63 4659 135 3296 1143 74.25 4439 136 3325 1026 76.42 4351 137 3247 1031 75.90 4278 138 3098 1016 75.30 4114 139 3099 1038 74.91 4137 140 3125 1004 75.68 4129 141 3025 985 75.44 4010 142 2995 1015 74.69 4010 143 2903 967 75.01 3870 144 2729 866 75.91 3595 145 2148 391 84.60 2539 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 11857 265282 4.28 277139 2 10388 176434 5.56 186822 3 8752 162156 5.12 170908 4 5600 157428 3.43 163028 5 6834 154534 4.24 161368 6 8192 150621 5.16 158813 7 4432 151518 2.84 155950 8 3738 147899 2.47 151637 9 3629 141392 2.50 145021 10 3285 142774 2.25 146059 11 3958 141421 2.72 145379 12 2792 147563 1.86 150355 13 3136 133678 2.29 136814 14 2605 132581 1.93 135186 15 2726 130011 2.05 132737 16 2284 129805 1.73 132089 17 2130 124548 1.68 126678 18 1831 124453 1.45 126284 19 1795 121882 1.45 123677 20 1674 123225 1.34 124899 21 1511 119441 1.25 120952 22 1518 115798 1.29 117316 23 1319 114524 1.14 115843 24 1345 112689 1.18 114034 25 1128 110073 1.01 111201 26 1143 112252 1.01 113395 27 1046 106269 0.97 107315 28 1124 103592 1.07 104716 29 935 103508 0.90 104443 30 1047 101593 1.02 102640 31 890 98141 0.90 99031 32 1048 98318 1.05 99366 33 743 95535 0.77 96278 34 1033 94345 1.08 95378 35 777 93127 0.83 93904 36 957 92715 1.02 93672 37 727 88415 0.82 89142 38 828 88486 0.93 89314 39 736 85889 0.85 86625 40 789 84265 0.93 85054 41 682 81008 0.83 81690 42 718 81756 0.87 82474 43 683 79507 0.85 80190 44 640 78767 0.81 79407 45 647 75658 0.85 76305 46 602 74741 0.80 75343 47 608 73604 0.82 74212 48 572 72436 0.78 73008 49 652 69816 0.93 70468 50 527 69556 0.75 70083 51 642 66110 0.96 66752 52 569 66171 0.85 66740 53 634 64176 0.98 64810 54 531 64543 0.82 65074 55 612 62263 0.97 62875 56 533 62700 0.84 63233 57 610 58821 1.03 59431 58 486 59012 0.82 59498 59 540 57449 0.93 57989 60 573 57099 0.99 57672 61 510 56075 0.90 56585 62 524 55072 0.94 55596 63 569 53166 1.06 53735 64 455 52862 0.85 53317 65 519 51402 1.00 51921 66 491 50262 0.97 50753 67 500 49479 1.00 49979 68 462 49709 0.92 50171 69 478 47591 0.99 48069 70 440 47473 0.92 47913 71 408 46318 0.87 46726 72 492 46210 1.05 46702 73 449 44641 1.00 45090 74 435 43946 0.98 44381 75 398 43032 0.92 43430 76 460 42889 1.06 43349 77 405 41213 0.97 41618 78 450 40536 1.10 40986 79 428 39455 1.07 39883 80 433 39848 1.07 40281 81 351 37834 0.92 38185 82 387 37864 1.01 38251 83 360 36173 0.99 36533 84 396 36645 1.07 37041 85 341 35591 0.95 35932 86 368 35173 1.04 35541 87 321 34105 0.93 34426 88 365 34165 1.06 34530 89 314 32474 0.96 32788 90 330 32826 1.00 33156 91 344 32698 1.04 33042 92 331 31953 1.03 32284 93 328 30392 1.07 30720 94 313 29889 1.04 30202 95 307 29857 1.02 30164 96 274 29312 0.93 29586 97 286 28340 1.00 28626 98 263 27854 0.94 28117 99 279 27448 1.01 27727 100 273 27756 0.97 28029 101 295 26616 1.10 26911 102 268 26003 1.02 26271 103 258 25316 1.01 25574 104 273 25868 1.04 26141 105 272 24245 1.11 24517 106 235 24072 0.97 24307 107 255 23659 1.07 23914 108 233 23389 0.99 23622 109 269 23123 1.15 23392 110 261 22249 1.16 22510 111 274 21995 1.23 22269 112 226 21922 1.02 22148 113 219 20862 1.04 21081 114 226 20863 1.07 21089 115 233 20429 1.13 20662 116 211 20137 1.04 20348 117 185 19557 0.94 19742 118 206 19096 1.07 19302 119 178 18954 0.93 19132 120 187 18931 0.98 19118 121 179 18299 0.97 18478 122 177 18050 0.97 18227 123 201 17493 1.14 17694 124 187 17890 1.03 18077 125 148 17089 0.86 17237 126 179 16755 1.06 16934 127 175 16565 1.05 16740 128 147 16362 0.89 16509 129 147 15980 0.91 16127 130 149 15727 0.94 15876 131 145 15225 0.94 15370 132 141 15132 0.92 15273 133 154 14400 1.06 14554 134 153 14593 1.04 14746 135 149 13995 1.05 14144 136 149 14105 1.05 14254 137 134 13596 0.98 13730 138 124 13476 0.91 13600 139 125 13206 0.94 13331 140 151 13131 1.14 13282 141 119 12826 0.92 12945 142 111 12651 0.87 12762 143 140 12108 1.14 12248 144 112 11347 0.98 11459 145 99 5195 1.87 5294 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 49624 477603 9.41 527227 2 43830 525492 7.70 569322 3 39148 501890 7.24 541038 4 31992 472978 6.34 504970 5 28176 446075 5.94 474251 6 27751 434925 6.00 462676 7 24964 415283 5.67 440247 8 22599 409108 5.23 431707 9 21631 398232 5.15 419863 10 21213 388280 5.18 409493 11 20449 383959 5.06 404408 12 18111 374282 4.62 392393 13 16200 364467 4.26 380667 14 16861 359938 4.47 376799 15 15833 354670 4.27 370503 16 15270 342634 4.27 357904 17 14233 335227 4.07 349460 18 14439 327980 4.22 342419 19 12941 324296 3.84 337237 20 13322 317540 4.03 330862 21 11852 318280 3.59 330132 22 12648 309065 3.93 321713 23 10811 304392 3.43 315203 24 12091 295303 3.93 307394 25 9653 294571 3.17 304224 26 11162 286528 3.75 297690 27 9255 286483 3.13 295738 28 10509 281583 3.60 292092 29 8571 274538 3.03 283109 30 9946 270422 3.55 280368 31 7915 265436 2.90 273351 32 9264 263146 3.40 272410 33 7611 259559 2.85 267170 34 8949 253502 3.41 262451 35 7071 249341 2.76 256412 36 8490 241329 3.40 249819 37 6795 234233 2.82 241028 38 8107 232678 3.37 240785 39 7036 229866 2.97 236902 40 7601 223318 3.29 230919 41 6806 221143 2.99 227949 42 7889 216453 3.52 224342 43 6605 210763 3.04 217368 44 7454 204590 3.52 212044 45 6553 202223 3.14 208776 46 7176 197546 3.51 204722 47 6559 195787 3.24 202346 48 6877 192112 3.46 198989 49 6489 188896 3.32 195385 50 6891 183174 3.63 190065 51 6168 183481 3.25 189649 52 6423 179533 3.45 185956 53 6048 176123 3.32 182171 54 6692 171699 3.75 178391 55 5796 168981 3.32 174777 56 6096 165922 3.54 172018 57 5773 163429 3.41 169202 58 6062 158578 3.68 164640 59 5671 158643 3.45 164314 60 5983 155754 3.70 161737 61 5327 152659 3.37 157986 62 6044 147895 3.93 153939 63 5024 145165 3.35 150189 64 5702 144289 3.80 149991 65 4798 141237 3.29 146035 66 5776 139173 3.98 144949 67 4592 137888 3.22 142480 68 5401 133629 3.88 139030 69 4752 131012 3.50 135764 70 5313 129366 3.94 134679 71 4516 125545 3.47 130061 72 5213 124300 4.03 129513 73 4230 121836 3.36 126066 74 5157 119141 4.15 124298 75 4235 117707 3.47 121942 76 4770 115630 3.96 120400 77 4146 113466 3.53 117612 78 4639 110714 4.02 115353 79 4024 109164 3.56 113188 80 4352 108003 3.87 112355 81 3881 106241 3.52 110122 82 4374 102380 4.10 106754 83 3684 102730 3.46 106414 84 4310 100754 4.10 105064 85 3663 98701 3.58 102364 86 3949 97198 3.90 101147 87 3529 97106 3.51 100635 88 3789 94291 3.86 98080 89 3521 92546 3.67 96067 90 3630 90793 3.84 94423 91 3210 89066 3.48 92276 92 3488 87873 3.82 91361 93 3263 86817 3.62 90080 94 3381 83985 3.87 87366 95 2979 82657 3.48 85636 96 3215 81033 3.82 84248 97 2946 79895 3.56 82841 98 3135 78659 3.83 81794 99 2934 77338 3.66 80272 100 2814 75862 3.58 78676 101 2687 74673 3.47 77360 102 2937 73451 3.84 76388 103 2528 71860 3.40 74388 104 2815 70927 3.82 73742 105 2483 69552 3.45 72035 106 2675 68248 3.77 70923 107 2383 67147 3.43 69530 108 2529 66335 3.67 68864 109 2285 65798 3.36 68083 110 2416 63731 3.65 66147 111 2219 62466 3.43 64685 112 2299 61926 3.58 64225 113 2065 60257 3.31 62322 114 2301 59068 3.75 61369 115 1930 58179 3.21 60109 116 2217 57350 3.72 59567 117 1899 56426 3.26 58325 118 2058 55642 3.57 57700 119 1769 54586 3.14 56355 120 2022 53937 3.61 55959 121 1705 52559 3.14 54264 122 1936 51665 3.61 53601 123 1709 50802 3.25 52511 124 1845 50081 3.55 51926 125 1572 49355 3.09 50927 126 1775 48779 3.51 50554 127 1530 47647 3.11 49177 128 1595 46638 3.31 48233 129 1621 46132 3.39 47753 130 1546 44956 3.32 46502 131 1401 44381 3.06 45782 132 1576 43829 3.47 45405 133 1363 42646 3.10 44009 134 1528 41997 3.51 43525 135 1358 41157 3.19 42515 136 1300 40022 3.15 41322 137 1302 40160 3.14 41462 138 1365 38858 3.39 40223 139 1259 38706 3.15 39965 140 1255 37594 3.23 38849 141 1177 37127 3.07 38304 142 1265 36242 3.37 37507 143 1068 35642 2.91 36710 144 998 33122 2.92 34120 145 705 16140 4.19 16845