CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 220045 117048 65.28 337093 2 212921 106773 66.60 319694 3 236015 109174 68.37 345189 4 260554 106915 70.91 367469 5 262737 101885 72.06 364622 6 298927 99451 75.04 398378 7 320779 99619 76.30 420398 8 309956 96980 76.17 406936 9 303177 98490 75.48 401667 10 296068 96582 75.40 392650 11 300379 98588 75.29 398967 12 298456 95543 75.75 393999 13 303436 97954 75.60 401390 14 305122 95991 76.07 401113 15 321057 98974 76.44 420031 16 320891 97369 76.72 418260 17 329185 98452 76.98 427637 18 331786 99990 76.84 431776 19 322609 97766 76.74 420375 20 309181 94025 76.68 403206 21 324146 97076 76.95 421222 22 321474 97186 76.79 418660 23 317447 96736 76.64 414183 24 315824 96355 76.62 412179 25 317929 96557 76.70 414486 26 313007 94419 76.83 407426 27 312286 94880 76.70 407166 28 328778 96069 77.39 424847 29 319413 94653 77.14 414066 30 325081 96395 77.13 421476 31 319028 95943 76.88 414971 32 324638 95908 77.19 420546 33 322792 95518 77.17 418310 34 324724 95537 77.27 420261 35 320014 95125 77.09 415139 36 320317 93894 77.33 414211 37 316677 93411 77.22 410088 38 318379 92308 77.52 410687 39 318238 93211 77.35 411449 40 309596 91950 77.10 401546 41 314483 93019 77.17 407502 42 310085 91308 77.25 401393 43 312564 92329 77.20 404893 44 308624 90840 77.26 399464 45 307592 89792 77.40 397384 46 299486 89477 77.00 388963 47 308835 88783 77.67 397618 48 307469 89208 77.51 396677 49 303917 89451 77.26 393368 50 295436 87891 77.07 383327 51 301355 87939 77.41 389294 52 296356 87123 77.28 383479 53 299481 88025 77.28 387506 54 294758 86977 77.22 381735 55 291969 86409 77.16 378378 56 289984 85469 77.24 375453 57 290578 86207 77.12 376785 58 292071 86359 77.18 378430 59 283689 83754 77.21 367443 60 280426 83940 76.96 364366 61 276640 82975 76.93 359615 62 269129 81124 76.84 350253 63 274837 82016 77.02 356853 64 261694 79232 76.76 340926 65 258271 78817 76.62 337088 66 254127 79838 76.09 333965 67 255126 77250 76.76 332376 68 258359 76575 77.14 334934 69 254378 76089 76.98 330467 70 241841 73003 76.81 314844 71 239679 72300 76.83 311979 72 240552 72907 76.74 313459 73 237021 72407 76.60 309428 74 235763 70818 76.90 306581 75 232564 69629 76.96 302193 76 229644 69830 76.68 299474 77 231716 68883 77.08 300599 78 223998 67732 76.78 291730 79 218238 67544 76.37 285782 80 214057 65652 76.53 279709 81 205799 63998 76.28 269797 82 202880 62595 76.42 265475 83 201214 62377 76.34 263591 84 199523 61842 76.34 261365 85 196247 61129 76.25 257376 86 196663 59410 76.80 256073 87 189524 58399 76.44 247923 88 189468 58065 76.54 247533 89 189292 57912 76.57 247204 90 181681 56302 76.34 237983 91 175832 54573 76.31 230405 92 173644 53877 76.32 227521 93 167674 52598 76.12 220272 94 169123 52321 76.37 221444 95 166813 51083 76.56 217896 96 162105 51119 76.03 213224 97 159452 50313 76.01 209765 98 154837 48276 76.23 203113 99 152088 48411 75.85 200499 100 148049 45988 76.30 194037 101 146530 45554 76.28 192084 102 145020 45548 76.10 190568 103 143471 45562 75.90 189033 104 138142 43566 76.02 181708 105 136801 43314 75.95 180115 106 136221 42631 76.16 178852 107 132107 41312 76.18 173419 108 129876 41300 75.87 171176 109 124368 39668 75.82 164036 110 120272 38517 75.74 158789 111 120613 38650 75.73 159263 112 117944 38010 75.63 155954 113 113247 37438 75.15 150685 114 112410 36716 75.38 149126 115 111312 35792 75.67 147104 116 109794 35297 75.67 145091 117 104815 34030 75.49 138845 118 99562 33552 74.79 133114 119 98618 33007 74.92 131625 120 95531 31996 74.91 127527 121 95196 31610 75.07 126806 122 93531 30918 75.16 124449 123 92639 30453 75.26 123092 124 91022 30152 75.12 121174 125 87275 29274 74.88 116549 126 85759 28942 74.77 114701 127 82162 27942 74.62 110104 128 79475 27130 74.55 106605 129 78354 26939 74.42 105293 130 77380 26847 74.24 104227 131 77721 26386 74.65 104107 132 75463 25433 74.79 100896 133 73409 25466 74.24 98875 134 70744 24765 74.07 95509 135 68485 24253 73.85 92738 136 67955 23171 74.57 91126 137 66085 23137 74.07 89222 138 63706 22735 73.70 86441 139 62993 22272 73.88 85265 140 61371 22315 73.33 83686 141 60057 22065 73.13 82122 142 59490 22288 72.75 81778 143 58072 21351 73.12 79423 144 56503 19883 73.97 76386 145 47761 10125 82.51 57886 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 36099 1396554 2.52 1432653 2 30381 959313 3.07 989694 3 23981 933538 2.50 957519 4 17664 940814 1.84 958478 5 20679 947513 2.14 968192 6 27219 941295 2.81 968514 7 15006 954543 1.55 969549 8 14520 972667 1.47 987187 9 12683 948716 1.32 961399 10 11836 975477 1.20 987313 11 14464 1000129 1.43 1014593 12 10486 1012824 1.02 1023310 13 12802 981917 1.29 994719 14 10097 970485 1.03 980582 15 11742 995431 1.17 1007173 16 9496 1007554 0.93 1017050 17 9620 972231 0.98 981851 18 8472 1001757 0.84 1010229 19 8632 1003104 0.85 1011736 20 8352 1022219 0.81 1030571 21 8401 998022 0.83 1006423 22 8209 997692 0.82 1005901 23 7809 997846 0.78 1005655 24 7803 995046 0.78 1002849 25 7263 993075 0.73 1000338 26 7757 1032812 0.75 1040569 27 6781 980128 0.69 986909 28 7741 992452 0.77 1000193 29 6923 1000091 0.69 1007014 30 7802 992036 0.78 999838 31 6799 988454 0.68 995253 32 7975 1001742 0.79 1009717 33 6826 991273 0.68 998099 34 8328 984572 0.84 992900 35 6695 989447 0.67 996142 36 8305 1010679 0.82 1018984 37 7024 984525 0.71 991549 38 7927 991247 0.79 999174 39 7015 977955 0.71 984970 40 7915 977556 0.80 985471 41 7424 983541 0.75 990965 42 7874 994199 0.79 1002073 43 7515 997909 0.75 1005424 44 7829 997968 0.78 1005797 45 7861 973239 0.80 981100 46 7883 978442 0.80 986325 47 8067 957402 0.84 965469 48 7908 964601 0.81 972509 49 8369 964254 0.86 972623 50 7903 964258 0.81 972161 51 9030 940045 0.95 949075 52 8416 947570 0.88 955986 53 8847 946979 0.93 955826 54 8435 926548 0.90 934983 55 9251 920381 1.00 929632 56 8421 909925 0.92 918346 57 9630 890649 1.07 900279 58 8986 905098 0.98 914084 59 9502 891255 1.05 900757 60 8817 884770 0.99 893587 61 9528 865561 1.09 875089 62 9041 858105 1.04 867146 63 9404 850860 1.09 860264 64 9022 852965 1.05 861987 65 9273 836366 1.10 845639 66 9245 828015 1.10 837260 67 9275 816631 1.12 825906 68 9648 824630 1.16 834278 69 9323 801550 1.15 810873 70 9606 802641 1.18 812247 71 9546 781976 1.21 791522 72 9641 780339 1.22 789980 73 9306 757720 1.21 767026 74 9832 765946 1.27 775778 75 9385 753200 1.23 762585 76 9942 737814 1.33 747756 77 9199 723074 1.26 732273 78 9721 714564 1.34 724285 79 9397 703439 1.32 712836 80 9682 705132 1.35 714814 81 9162 682958 1.32 692120 82 9512 672598 1.39 682110 83 9113 665335 1.35 674448 84 9482 651954 1.43 661436 85 9226 641585 1.42 650811 86 9119 633609 1.42 642728 87 9045 613411 1.45 622456 88 8970 610088 1.45 619058 89 8760 589472 1.46 598232 90 8852 587459 1.48 596311 91 8911 578838 1.52 587749 92 8628 568132 1.50 576760 93 8402 554185 1.49 562587 94 8334 543203 1.51 551537 95 8498 534577 1.56 543075 96 8235 536329 1.51 544564 97 8416 522125 1.59 530541 98 8170 519069 1.55 527239 99 8263 512155 1.59 520418 100 8162 502197 1.60 510359 101 8056 477414 1.66 485470 102 7954 476306 1.64 484260 103 7665 461122 1.64 468787 104 7722 465866 1.63 473588 105 7511 445874 1.66 453385 106 7311 438419 1.64 445730 107 7406 435956 1.67 443362 108 7482 426535 1.72 434017 109 7069 413107 1.68 420176 110 6853 404821 1.66 411674 111 6913 393856 1.72 400769 112 7004 394090 1.75 401094 113 6736 376866 1.76 383602 114 6768 371744 1.79 378512 115 6356 368558 1.70 374914 116 6634 363387 1.79 370021 117 6368 350466 1.78 356834 118 6462 344022 1.84 350484 119 6154 338326 1.79 344480 120 6319 336276 1.84 342595 121 6158 327134 1.85 333292 122 6169 323473 1.87 329642 123 5893 309302 1.87 315195 124 6163 307332 1.97 313495 125 5785 299240 1.90 305025 126 5737 294078 1.91 299815 127 5649 287455 1.93 293104 128 5480 279118 1.93 284598 129 5276 268414 1.93 273690 130 5436 266227 2.00 271663 131 5146 261703 1.93 266849 132 5224 254747 2.01 259971 133 4893 245674 1.95 250567 134 4930 239570 2.02 244500 135 5023 232195 2.12 237218 136 4852 234962 2.02 239814 137 4811 226159 2.08 230970 138 4871 220952 2.16 225823 139 4839 214251 2.21 219090 140 4961 213593 2.27 218554 141 5162 210931 2.39 216093 142 5311 207423 2.50 212734 143 5600 197896 2.75 203496 144 5396 188527 2.78 193923 145 4116 98949 3.99 103065 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 160685 2563000 5.90 2723685 2 142724 2872627 4.73 3015351 3 131416 2846787 4.41 2978203 4 105134 2733740 3.70 2838874 5 94025 2630508 3.45 2724533 6 90009 2600240 3.35 2690249 7 81552 2531732 3.12 2613284 8 74450 2523522 2.87 2597972 9 74279 2479603 2.91 2553882 10 69835 2492070 2.73 2561905 11 71776 2527826 2.76 2599602 12 62703 2460721 2.48 2523424 13 61458 2425289 2.47 2486747 14 61368 2447190 2.45 2508558 15 62781 2432346 2.52 2495127 16 59414 2429274 2.39 2488688 17 59484 2398743 2.42 2458227 18 57760 2415198 2.34 2472958 19 56641 2399545 2.31 2456186 20 57130 2401360 2.32 2458490 21 54807 2433345 2.20 2488152 22 56952 2423788 2.30 2480740 23 52251 2440694 2.10 2492945 24 56730 2430378 2.28 2487108 25 50599 2438333 2.03 2488932 26 56094 2456817 2.23 2512911 27 49925 2488253 1.97 2538178 28 54557 2482040 2.15 2536597 29 48943 2477255 1.94 2526198 30 54292 2493312 2.13 2547604 31 46370 2480041 1.84 2526411 32 52852 2527196 2.05 2580048 33 45810 2520737 1.78 2566547 34 51955 2494395 2.04 2546350 35 44998 2516715 1.76 2561713 36 51158 2497172 2.01 2548330 37 44634 2473627 1.77 2518261 38 50747 2476651 2.01 2527398 39 45988 2497281 1.81 2543269 40 48877 2482864 1.93 2531741 41 46761 2486609 1.85 2533370 42 50815 2489234 2.00 2540049 43 47034 2465271 1.87 2512305 44 50349 2464738 2.00 2515087 45 47952 2458170 1.91 2506122 46 49761 2441381 2.00 2491142 47 48605 2440129 1.95 2488734 48 49848 2448257 2.00 2498105 49 49334 2416001 2.00 2465335 50 49666 2415415 2.01 2465081 51 49599 2403120 2.02 2452719 52 48891 2389080 2.01 2437971 53 49535 2377601 2.04 2427136 54 49656 2352212 2.07 2401868 55 48464 2342836 2.03 2391300 56 49145 2326618 2.07 2375763 57 49153 2304473 2.09 2353626 58 48772 2273305 2.10 2322077 59 49032 2290733 2.10 2339765 60 49526 2284634 2.12 2334160 61 49131 2254334 2.13 2303465 62 51739 2211048 2.29 2262787 63 48736 2193842 2.17 2242578 64 49915 2166349 2.25 2216264 65 47148 2152932 2.14 2200080 66 50760 2138741 2.32 2189501 67 46461 2103664 2.16 2150125 68 49836 2084173 2.34 2134009 69 47134 2071221 2.23 2118355 70 49886 2037053 2.39 2086939 71 45792 2007651 2.23 2053443 72 49478 1964341 2.46 2013819 73 45091 1938827 2.27 1983918 74 49058 1918434 2.49 1967492 75 44945 1892204 2.32 1937149 76 48677 1872683 2.53 1921360 77 44768 1836442 2.38 1881210 78 47720 1817943 2.56 1865663 79 44004 1798588 2.39 1842592 80 46618 1772224 2.56 1818842 81 43787 1731619 2.47 1775406 82 45267 1695277 2.60 1740544 83 42248 1676839 2.46 1719087 84 45684 1662966 2.67 1708650 85 42232 1638002 2.51 1680234 86 43317 1616597 2.61 1659914 87 42028 1590827 2.57 1632855 88 41369 1541882 2.61 1583251 89 40529 1515193 2.61 1555722 90 40889 1501278 2.65 1542167 91 39342 1464049 2.62 1503391 92 39903 1445651 2.69 1485554 93 38745 1423536 2.65 1462281 94 38456 1390264 2.69 1428720 95 37515 1378566 2.65 1416081 96 37300 1344003 2.70 1381303 97 36555 1320613 2.69 1357168 98 36859 1299128 2.76 1335987 99 35634 1285345 2.70 1320979 100 34626 1253321 2.69 1287947 101 34331 1230131 2.72 1264462 102 34535 1205016 2.79 1239551 103 32771 1174144 2.72 1206915 104 33401 1154725 2.81 1188126 105 31678 1128958 2.73 1160636 106 32107 1107912 2.82 1140019 107 30547 1085399 2.74 1115946 108 31045 1065694 2.83 1096739 109 29747 1057158 2.74 1086905 110 30564 1029435 2.88 1059999 111 28831 1009510 2.78 1038341 112 29301 991668 2.87 1020969 113 27640 968026 2.78 995666 114 28893 954237 2.94 983130 115 26552 929823 2.78 956375 116 27902 913397 2.96 941299 117 26168 897028 2.83 923196 118 26582 874856 2.95 901438 119 25605 864436 2.88 890041 120 26059 848487 2.98 874546 121 24046 823681 2.84 847727 122 24801 805615 2.99 830416 123 23395 794176 2.86 817571 124 23751 770181 2.99 793932 125 22667 756685 2.91 779352 126 23004 738938 3.02 761942 127 21785 727261 2.91 749046 128 22044 714864 2.99 736908 129 21745 701625 3.01 723370 130 21706 684746 3.07 706452 131 20321 668740 2.95 689061 132 20864 660196 3.06 681060 133 19742 648567 2.95 668309 134 20237 634234 3.09 654471 135 19315 618235 3.03 637550 136 19230 604661 3.08 623891 137 19073 593412 3.11 612485 138 18918 578497 3.17 597415 139 18529 567187 3.16 585716 140 19222 556468 3.34 575690 141 18741 544208 3.33 562949 142 19466 533656 3.52 553122 143 18943 521125 3.51 540068 144 18008 494097 3.52 512105 145 13410 256709 4.96 270119 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 32365 24966 56.45 57331 2 31409 21693 59.15 53102 3 34777 20130 63.34 54907 4 37302 19025 66.22 56327 5 36736 17222 68.08 53958 6 41586 16157 72.02 57743 7 46194 15337 75.07 61531 8 43816 14595 75.01 58411 9 37937 14600 72.21 52537 10 37458 14302 72.37 51760 11 37475 14381 72.27 51856 12 35140 14262 71.13 49402 13 35754 12952 73.41 48706 14 35394 12437 74.00 47831 15 35411 12535 73.86 47946 16 34430 11859 74.38 46289 17 33974 11824 74.18 45798 18 34825 11848 74.61 46673 19 32325 11137 74.38 43462 20 30754 10294 74.92 41048 21 31621 10429 75.20 42050 22 30709 9993 75.45 40702 23 30177 10073 74.97 40250 24 29020 9671 75.00 38691 25 29550 9642 75.40 39192 26 27079 8877 75.31 35956 27 27281 8854 75.50 36135 28 27448 8603 76.14 36051 29 27139 8618 75.90 35757 30 26408 8208 76.29 34616 31 25117 7882 76.11 32999 32 24792 7803 76.06 32595 33 24121 7769 75.64 31890 34 23456 7291 76.29 30747 35 22808 7160 76.11 29968 36 22281 6935 76.26 29216 37 22016 6900 76.14 28916 38 21205 6480 76.59 27685 39 20843 6382 76.56 27225 40 19683 6303 75.74 25986 41 20282 6227 76.51 26509 42 19001 5881 76.36 24882 43 19226 6015 76.17 25241 44 19113 5765 76.83 24878 45 18331 5517 76.87 23848 46 17241 5271 76.59 22512 47 17569 5291 76.85 22860 48 17299 5174 76.98 22473 49 16772 5024 76.95 21796 50 15955 4883 76.57 20838 51 15670 4758 76.71 20428 52 15209 4607 76.75 19816 53 15128 4650 76.49 19778 54 14706 4498 76.58 19204 55 14343 4438 76.37 18781 56 13924 4324 76.30 18248 57 13966 4304 76.44 18270 58 13682 4175 76.62 17857 59 13379 4076 76.65 17455 60 12851 3905 76.69 16756 61 12764 3830 76.92 16594 62 12722 3879 76.63 16601 63 12628 3782 76.95 16410 64 11679 3700 75.94 15379 65 11120 3590 75.59 14710 66 11309 3502 76.36 14811 67 11045 3464 76.13 14509 68 10922 3293 76.83 14215 69 10710 3334 76.26 14044 70 10339 3067 77.12 13406 71 10260 3203 76.21 13463 72 9922 3083 76.29 13005 73 9797 3106 75.93 12903 74 9586 2910 76.71 12496 75 9346 2843 76.68 12189 76 9064 2773 76.57 11837 77 9246 2804 76.73 12050 78 9056 2805 76.35 11861 79 8790 2654 76.81 11444 80 8669 2597 76.95 11266 81 8071 2573 75.83 10644 82 8034 2506 76.22 10540 83 7733 2452 75.93 10185 84 7825 2426 76.33 10251 85 7446 2315 76.28 9761 86 7612 2342 76.47 9954 87 7271 2138 77.28 9409 88 7292 2199 76.83 9491 89 7355 2189 77.06 9544 90 6900 2014 77.41 8914 91 6846 2020 77.22 8866 92 6681 2029 76.70 8710 93 6321 1956 76.37 8277 94 6243 1877 76.88 8120 95 6182 2007 75.49 8189 96 6133 1944 75.93 8077 97 5953 1940 75.42 7893 98 6025 1870 76.31 7895 99 5979 1768 77.18 7747 100 5839 1816 76.28 7655 101 5559 1720 76.37 7279 102 5254 1630 76.32 6884 103 5494 1688 76.50 7182 104 5091 1599 76.10 6690 105 5254 1561 77.09 6815 106 5166 1651 75.78 6817 107 5211 1491 77.75 6702 108 4954 1464 77.19 6418 109 4733 1459 76.44 6192 110 4705 1494 75.90 6199 111 4410 1412 75.75 5822 112 4512 1397 76.36 5909 113 4243 1277 76.87 5520 114 4346 1326 76.62 5672 115 4249 1348 75.92 5597 116 4197 1219 77.49 5416 117 4068 1265 76.28 5333 118 3961 1261 75.85 5222 119 3900 1221 76.16 5121 120 3703 1159 76.16 4862 121 3764 1192 75.95 4956 122 3658 1130 76.40 4788 123 3536 1127 75.83 4663 124 3595 1121 76.23 4716 125 3545 1120 75.99 4665 126 3306 1034 76.18 4340 127 3264 1060 75.49 4324 128 3193 948 77.11 4141 129 3092 1034 74.94 4126 130 3123 1036 75.09 4159 131 3153 987 76.16 4140 132 3032 986 75.46 4018 133 2896 955 75.20 3851 134 2899 962 75.08 3861 135 2790 909 75.43 3699 136 2741 855 76.22 3596 137 2709 838 76.37 3547 138 2682 838 76.19 3520 139 2556 814 75.85 3370 140 2520 852 74.73 3372 141 2563 776 76.76 3339 142 2294 750 75.36 3044 143 2344 815 74.20 3159 144 2203 762 74.30 2965 145 1730 333 83.86 2063 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 11045 248807 4.25 259852 2 9370 166686 5.32 176056 3 7721 153443 4.79 161164 4 5198 148252 3.39 153450 5 7629 145845 4.97 153474 6 11112 140398 7.33 151510 7 4333 141427 2.97 145760 8 3972 138520 2.79 142492 9 3189 135390 2.30 138579 10 3549 133890 2.58 137439 11 4611 132415 3.37 137026 12 2493 138050 1.77 140543 13 2963 123971 2.33 126934 14 2293 123115 1.83 125408 15 2497 120202 2.04 122699 16 2067 120256 1.69 122323 17 2077 115028 1.77 117105 18 1763 114069 1.52 115832 19 1761 113141 1.53 114902 20 1431 112420 1.26 113851 21 1436 108818 1.30 110254 22 1301 105767 1.22 107068 23 1237 105275 1.16 106512 24 1271 102049 1.23 103320 25 1085 99986 1.07 101071 26 1045 101616 1.02 102661 27 964 95352 1.00 96316 28 1041 93829 1.10 94870 29 829 93610 0.88 94439 30 965 91208 1.05 92173 31 712 88735 0.80 89447 32 861 88689 0.96 89550 33 655 85153 0.76 85808 34 924 84306 1.08 85230 35 695 83902 0.82 84597 36 837 83981 0.99 84818 37 602 78621 0.76 79223 38 739 78642 0.93 79381 39 545 76239 0.71 76784 40 738 74544 0.98 75282 41 580 72336 0.80 72916 42 621 71885 0.86 72506 43 528 69848 0.75 70376 44 593 69314 0.85 69907 45 586 66579 0.87 67165 46 532 66728 0.79 67260 47 569 64667 0.87 65236 48 485 64879 0.74 65364 49 535 61131 0.87 61666 50 462 61028 0.75 61490 51 536 58182 0.91 58718 52 455 57885 0.78 58340 53 539 56751 0.94 57290 54 424 55805 0.75 56229 55 493 53648 0.91 54141 56 410 54130 0.75 54540 57 548 50922 1.06 51470 58 418 51155 0.81 51573 59 496 49299 1.00 49795 60 375 49112 0.76 49487 61 504 47991 1.04 48495 62 443 47295 0.93 47738 63 483 46530 1.03 47013 64 394 46071 0.85 46465 65 385 44034 0.87 44419 66 351 43167 0.81 43518 67 383 42207 0.90 42590 68 400 42434 0.93 42834 69 408 40759 0.99 41167 70 413 40756 1.00 41169 71 370 39984 0.92 40354 72 430 39218 1.08 39648 73 361 37845 0.94 38206 74 391 37309 1.04 37700 75 328 36264 0.90 36592 76 360 36077 0.99 36437 77 328 34955 0.93 35283 78 372 34520 1.07 34892 79 304 33392 0.90 33696 80 368 33817 1.08 34185 81 306 31932 0.95 32238 82 350 31965 1.08 32315 83 294 31023 0.94 31317 84 353 30762 1.13 31115 85 239 29946 0.79 30185 86 310 29547 1.04 29857 87 242 28877 0.83 29119 88 284 29097 0.97 29381 89 269 27163 0.98 27432 90 290 27433 1.05 27723 91 279 27937 0.99 28216 92 277 26669 1.03 26946 93 269 25467 1.05 25736 94 263 24887 1.05 25150 95 269 24476 1.09 24745 96 248 24512 1.00 24760 97 260 23708 1.08 23968 98 241 23392 1.02 23633 99 269 23028 1.15 23297 100 229 22680 1.00 22909 101 242 22434 1.07 22676 102 205 21782 0.93 21987 103 222 21185 1.04 21407 104 218 21812 0.99 22030 105 211 20237 1.03 20448 106 179 20152 0.88 20331 107 247 19852 1.23 20099 108 182 19781 0.91 19963 109 187 19211 0.96 19398 110 181 18647 0.96 18828 111 168 18396 0.90 18564 112 217 18184 1.18 18401 113 170 17337 0.97 17507 114 166 17328 0.95 17494 115 188 17025 1.09 17213 116 175 16908 1.02 17083 117 193 16412 1.16 16605 118 182 16010 1.12 16192 119 143 15558 0.91 15701 120 161 15933 1.00 16094 121 123 15239 0.80 15362 122 164 15230 1.07 15394 123 156 14501 1.06 14657 124 130 14899 0.86 15029 125 141 14101 0.99 14242 126 165 13824 1.18 13989 127 117 13532 0.86 13649 128 128 13661 0.93 13789 129 131 13170 0.98 13301 130 123 12890 0.95 13013 131 149 12899 1.14 13048 132 143 12723 1.11 12866 133 121 12288 0.98 12409 134 106 11943 0.88 12049 135 102 11537 0.88 11639 136 117 11731 0.99 11848 137 114 11246 1.00 11360 138 106 11090 0.95 11196 139 101 11075 0.90 11176 140 112 11014 1.01 11126 141 107 10664 0.99 10771 142 109 10446 1.03 10555 143 92 9951 0.92 10043 144 108 9306 1.15 9414 145 84 4449 1.85 4533 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 46566 451236 9.35 497802 2 36778 498290 6.87 535068 3 35513 472447 6.99 507960 4 24839 446937 5.26 471776 5 22213 421457 5.01 443670 6 22610 405907 5.28 428517 7 20665 383771 5.11 404436 8 17557 378915 4.43 396472 9 17044 369078 4.41 386122 10 17381 363801 4.56 381182 11 18885 356806 5.03 375691 12 13940 347119 3.86 361059 13 13177 334955 3.79 348132 14 13330 329394 3.89 342724 15 12571 325153 3.72 337724 16 11981 313893 3.68 325874 17 11490 308336 3.59 319826 18 11017 302147 3.52 313164 19 10243 295301 3.35 305544 20 10306 291830 3.41 302136 21 9253 289765 3.09 299018 22 9608 282222 3.29 291830 23 8408 277308 2.94 285716 24 9192 271611 3.27 280803 25 7672 268683 2.78 276355 26 8463 262078 3.13 270541 27 7209 262723 2.67 269932 28 7839 257173 2.96 265012 29 6642 250604 2.58 257246 30 7291 246178 2.88 253469 31 5910 241112 2.39 247022 32 6759 241550 2.72 248309 33 5708 237480 2.35 243188 34 6391 231441 2.69 237832 35 5172 225933 2.24 231105 36 6119 218443 2.72 224562 37 5096 212168 2.35 217264 38 5790 211128 2.67 216918 39 5110 207240 2.41 212350 40 5413 202122 2.61 207535 41 4914 199201 2.41 204115 42 5571 194488 2.78 200059 43 4741 189092 2.45 193833 44 5354 183948 2.83 189302 45 4856 182049 2.60 186905 46 5125 175978 2.83 181103 47 4656 173876 2.61 178532 48 4900 171114 2.78 176014 49 4589 168909 2.64 173498 50 4854 163353 2.89 168207 51 4347 161687 2.62 166034 52 4574 160457 2.77 165031 53 4362 156743 2.71 161105 54 4540 152066 2.90 156606 55 4126 148380 2.71 152506 56 4290 146084 2.85 150374 57 4079 142601 2.78 146680 58 4119 139896 2.86 144015 59 4081 139666 2.84 143747 60 4276 137491 3.02 141767 61 3740 133534 2.72 137274 62 4216 129032 3.16 133248 63 3699 126857 2.83 130556 64 3994 125567 3.08 129561 65 3534 123243 2.79 126777 66 4125 120875 3.30 125000 67 3303 118695 2.71 121998 68 3875 115797 3.24 119672 69 3204 113536 2.74 116740 70 3651 112271 3.15 115922 71 3089 109200 2.75 112289 72 3731 107390 3.36 111121 73 2969 104821 2.75 107790 74 3652 102599 3.44 106251 75 2925 101780 2.79 104705 76 3415 99756 3.31 103171 77 2913 97732 2.89 100645 78 3414 95679 3.45 99093 79 2754 93965 2.85 96719 80 3182 92985 3.31 96167 81 2754 90513 2.95 93267 82 3030 88110 3.32 91140 83 2589 87288 2.88 89877 84 3008 85995 3.38 89003 85 2497 83861 2.89 86358 86 2820 83105 3.28 85925 87 2550 82231 3.01 84781 88 2698 79835 3.27 82533 89 2399 78322 2.97 80721 90 2656 77212 3.33 79868 91 2260 75484 2.91 77744 92 2511 74774 3.25 77285 93 2272 73866 2.98 76138 94 2417 71990 3.25 74407 95 2217 70720 3.04 72937 96 2252 69104 3.16 71356 97 2140 67610 3.07 69750 98 2135 66427 3.11 68562 99 2059 65880 3.03 67939 100 2075 64287 3.13 66362 101 2000 63166 3.07 65166 102 2097 62360 3.25 64457 103 1829 61106 2.91 62935 104 1915 60011 3.09 61926 105 1779 58655 2.94 60434 106 1872 57590 3.15 59462 107 1688 56702 2.89 58390 108 1821 55597 3.17 57418 109 1610 55311 2.83 56921 110 1727 53781 3.11 55508 111 1542 52966 2.83 54508 112 1568 52504 2.90 54072 113 1496 51130 2.84 52626 114 1631 49598 3.18 51229 115 1323 48968 2.63 50291 116 1561 48669 3.11 50230 117 1363 47421 2.79 48784 118 1453 46776 3.01 48229 119 1345 46571 2.81 47916 120 1443 45398 3.08 46841 121 1241 44548 2.71 45789 122 1408 43379 3.14 44787 123 1205 42998 2.73 44203 124 1373 42166 3.15 43539 125 1183 41546 2.77 42729 126 1277 40773 3.04 42050 127 1148 39894 2.80 41042 128 1154 39338 2.85 40492 129 1082 39054 2.70 40136 130 1045 37977 2.68 39022 131 1040 37306 2.71 38346 132 1100 37086 2.88 38186 133 981 36564 2.61 37545 134 1009 35670 2.75 36679 135 1001 34667 2.81 35668 136 943 34060 2.69 35003 137 956 34040 2.73 34996 138 1005 33047 2.95 34052 139 901 32585 2.69 33486 140 912 32012 2.77 32924 141 902 31460 2.79 32362 142 910 31007 2.85 31917 143 836 30442 2.67 31278 144 743 28141 2.57 28884 145 541 13545 3.84 14086