CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 127640 69856 64.63 197496 2 128621 63859 66.82 192480 3 145290 64896 69.12 210186 4 153508 63578 70.71 217086 5 156603 60826 72.02 217429 6 176980 59616 74.80 236596 7 191709 59979 76.17 251688 8 188074 57634 76.54 245708 9 187756 59753 75.86 247509 10 176726 57875 75.33 234601 11 182164 58610 75.66 240774 12 180248 56485 76.14 236733 13 182714 58161 75.85 240875 14 185475 58260 76.10 243735 15 190709 58262 76.60 248971 16 192368 58424 76.70 250792 17 195933 58644 76.96 254577 18 197055 58498 77.11 255553 19 195622 58012 77.13 253634 20 187431 56628 76.80 244059 21 194600 57346 77.24 251946 22 191219 56615 77.16 247834 23 193669 58584 76.78 252253 24 187885 57045 76.71 244930 25 194771 57832 77.11 252603 26 186518 54708 77.32 241226 27 189367 57280 76.78 246647 28 196220 57195 77.43 253415 29 192757 56842 77.23 249599 30 197102 57001 77.57 254103 31 190999 56724 77.10 247723 32 192808 55233 77.73 248041 33 195552 56705 77.52 252257 34 195384 56258 77.64 251642 35 194469 56544 77.47 251013 36 192594 56386 77.35 248980 37 194533 56242 77.57 250775 38 193047 54619 77.95 247666 39 192244 55378 77.64 247622 40 188032 55134 77.33 243166 41 193877 55196 77.84 249073 42 188225 54886 77.42 243111 43 193338 56176 77.49 249514 44 186959 53820 77.65 240779 45 189414 54866 77.54 244280 46 182825 54006 77.20 236831 47 191265 54192 77.92 245457 48 190121 54359 77.77 244480 49 188930 54092 77.74 243022 50 183187 52980 77.57 236167 51 185520 53857 77.50 239377 52 182965 52734 77.63 235699 53 186995 54797 77.34 241792 54 182329 53076 77.45 235405 55 183079 53939 77.24 237018 56 180715 52554 77.47 233269 57 181682 52503 77.58 234185 58 182147 53817 77.19 235964 59 179154 51689 77.61 230843 60 175594 51463 77.33 227057 61 177934 52001 77.38 229935 62 172917 51203 77.15 224120 63 176735 51180 77.54 227915 64 168977 50816 76.88 219793 65 167784 49822 77.10 217606 66 165857 50398 76.70 216255 67 165798 49573 76.98 215371 68 167792 49139 77.35 216931 69 166981 48646 77.44 215627 70 161877 47626 77.27 209503 71 160953 47519 77.21 208472 72 160128 47617 77.08 207745 73 160427 47676 77.09 208103 74 159317 47102 77.18 206419 75 159100 46791 77.27 205891 76 155399 46497 76.97 201896 77 160220 46564 77.48 206784 78 154719 45727 77.19 200446 79 151345 45424 76.92 196769 80 151208 44942 77.09 196150 81 145162 43828 76.81 188990 82 144064 42714 77.13 186778 83 144609 43581 76.84 188190 84 143655 44004 76.55 187659 85 143391 43448 76.75 186839 86 138663 41801 76.84 180464 87 139260 41168 77.18 180428 88 138534 41540 76.93 180074 89 139931 40978 77.35 180909 90 136175 40553 77.05 176728 91 133775 39766 77.09 173541 92 132537 39479 77.05 172016 93 128888 39127 76.71 168015 94 130111 38435 77.20 168546 95 129225 38413 77.09 167638 96 125719 38046 76.77 163765 97 124991 38230 76.58 163221 98 123500 36834 77.03 160334 99 120016 36359 76.75 156375 100 117002 35464 76.74 152466 101 115712 34717 76.92 150429 102 114916 34950 76.68 149866 103 115337 35673 76.38 151010 104 111154 34070 76.54 145224 105 112105 33893 76.79 145998 106 109858 34136 76.29 143994 107 108476 33317 76.50 141793 108 107501 32538 76.77 140039 109 104368 32279 76.38 136647 110 101216 31227 76.42 132443 111 102220 31560 76.41 133780 112 100760 30880 76.54 131640 113 96860 30479 76.06 127339 114 96816 30583 75.99 127399 115 96864 29972 76.37 126836 116 94354 28884 76.56 123238 117 91863 29092 75.95 120955 118 88987 28034 76.04 117021 119 89101 28403 75.83 117504 120 85905 27486 75.76 113391 121 85915 27501 75.75 113416 122 85018 26945 75.93 111963 123 84892 26911 75.93 111803 124 83983 26346 76.12 110329 125 82297 26104 75.92 108401 126 79640 25152 76.00 104792 127 77268 25137 75.45 102405 128 76237 24462 75.71 100699 129 75524 25044 75.10 100568 130 74176 24821 74.93 98997 131 73997 24366 75.23 98363 132 72367 23229 75.70 95596 133 72552 23462 75.56 96014 134 68733 22525 75.32 91258 135 69470 22383 75.63 91853 136 67922 22139 75.42 90061 137 65492 21568 75.23 87060 138 64946 21196 75.39 86142 139 65246 21450 75.26 86696 140 63242 20795 75.25 84037 141 62052 21274 74.47 83326 142 61748 20940 74.68 82688 143 59933 20272 74.72 80205 144 59360 19275 75.49 78635 145 49376 9041 84.52 58417 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 22680 1048630 2.12 1071310 2 20400 704703 2.81 725103 3 15944 660221 2.36 676165 4 12380 687932 1.77 700312 5 14882 679919 2.14 694801 6 19714 671323 2.85 691037 7 11315 671785 1.66 683100 8 11624 687547 1.66 699171 9 9834 671236 1.44 681070 10 9016 690831 1.29 699847 11 10976 701815 1.54 712791 12 8233 717750 1.13 725983 13 9514 694117 1.35 703631 14 8058 691550 1.15 699608 15 9307 698967 1.31 708274 16 8023 711395 1.12 719418 17 8100 684930 1.17 693030 18 7108 703756 1.00 710864 19 6962 702301 0.98 709263 20 7176 723088 0.98 730264 21 6751 707457 0.95 714208 22 7004 706292 0.98 713296 23 6437 704345 0.91 710782 24 6343 707133 0.89 713476 25 6062 700341 0.86 706403 26 6774 724392 0.93 731166 27 5946 689524 0.85 695470 28 6610 706037 0.93 712647 29 5852 702404 0.83 708256 30 6840 711469 0.95 718309 31 5809 694672 0.83 700481 32 6847 714179 0.95 721026 33 5796 705958 0.81 711754 34 6598 709157 0.92 715755 35 5744 707081 0.81 712825 36 6976 727897 0.95 734873 37 5860 696647 0.83 702507 38 6797 713281 0.94 720078 39 5853 699244 0.83 705097 40 6335 710597 0.88 716932 41 6081 696606 0.87 702687 42 6188 718173 0.85 724361 43 6007 708000 0.84 714007 44 6206 714208 0.86 720414 45 5838 695384 0.83 701222 46 6207 708293 0.87 714500 47 6005 687414 0.87 693419 48 6007 688860 0.86 694867 49 6331 684785 0.92 691116 50 6152 698092 0.87 704244 51 6457 674697 0.95 681154 52 5907 686258 0.85 692165 53 6747 674705 0.99 681452 54 6011 679829 0.88 685840 55 6521 665716 0.97 672237 56 6157 682809 0.89 688966 57 6808 650292 1.04 657100 58 6318 671792 0.93 678110 59 6777 658243 1.02 665020 60 6334 664589 0.94 670923 61 6643 648603 1.01 655246 62 6386 649088 0.97 655474 63 6462 635934 1.01 642396 64 6289 649152 0.96 655441 65 6448 633516 1.01 639964 66 6301 634560 0.98 640861 67 6291 625402 1.00 631693 68 6443 636131 1.00 642574 69 6280 618035 1.01 624315 70 6594 628225 1.04 634819 71 6415 612672 1.04 619087 72 6612 619411 1.06 626023 73 6388 600552 1.05 606940 74 6622 609222 1.08 615844 75 6380 599997 1.05 606377 76 6659 604417 1.09 611076 77 6191 585482 1.05 591673 78 6663 581909 1.13 588572 79 6129 573775 1.06 579904 80 6569 589239 1.10 595808 81 6333 565635 1.11 571968 82 6652 568893 1.16 575545 83 6266 550399 1.13 556665 84 6491 555370 1.16 561861 85 6256 538544 1.15 544800 86 6437 543768 1.17 550205 87 6074 526955 1.14 533029 88 6224 535101 1.15 541325 89 6014 512015 1.16 518029 90 5897 517915 1.13 523812 91 6029 512483 1.16 518512 92 6116 510859 1.18 516975 93 6094 491298 1.23 497392 94 6080 491607 1.22 497687 95 5877 483184 1.20 489061 96 5941 492114 1.19 498055 97 6209 480783 1.27 486992 98 5914 479529 1.22 485443 99 6176 473628 1.29 479804 100 5849 472211 1.22 478060 101 6095 451469 1.33 457564 102 5665 454073 1.23 459738 103 5710 439321 1.28 445031 104 5661 454211 1.23 459872 105 5451 426873 1.26 432324 106 5517 429879 1.27 435396 107 5418 422729 1.27 428147 108 5354 422236 1.25 427590 109 5433 410544 1.31 415977 110 5343 408898 1.29 414241 111 5174 398820 1.28 403994 112 5362 403379 1.31 408741 113 5095 385964 1.30 391059 114 5418 386516 1.38 391934 115 4899 379893 1.27 384792 116 5108 384473 1.31 389581 117 5048 364432 1.37 369480 118 5004 365066 1.35 370070 119 4905 357064 1.36 361969 120 4927 361141 1.35 366068 121 4822 348758 1.36 353580 122 4992 349769 1.41 354761 123 4778 337868 1.39 342646 124 4997 344416 1.43 349413 125 4752 329913 1.42 334665 126 4947 330155 1.48 335102 127 4702 320311 1.45 325013 128 4904 321248 1.50 326152 129 4624 307608 1.48 312232 130 4572 306317 1.47 310889 131 4472 303190 1.45 307662 132 4615 300921 1.51 305536 133 4491 287208 1.54 291699 134 4415 286711 1.52 291126 135 4280 277438 1.52 281718 136 4460 287706 1.53 292166 137 4491 272966 1.62 277457 138 4389 270461 1.60 274850 139 4518 267105 1.66 271623 140 4563 266687 1.68 271250 141 4604 261764 1.73 266368 142 4878 258572 1.85 263450 143 5047 249620 1.98 254667 144 4838 237027 2.00 241865 145 3606 115017 3.04 118623 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 137563 1725149 7.39 1862712 2 138804 1964875 6.60 2103679 3 124580 1944538 6.02 2069118 4 121189 1858741 6.12 1979930 5 107491 1798873 5.64 1906364 6 115712 1780380 6.10 1896092 7 101662 1745568 5.50 1847230 8 107152 1741991 5.79 1849143 9 101341 1725463 5.55 1826804 10 105960 1711500 5.83 1817460 11 97848 1733489 5.34 1831337 12 104011 1696600 5.78 1800611 13 92306 1679764 5.21 1772070 14 103302 1699199 5.73 1802501 15 95204 1692409 5.33 1787613 16 99803 1676801 5.62 1776604 17 93740 1662210 5.34 1755950 18 101024 1651195 5.77 1752219 19 89780 1665604 5.11 1755384 20 98351 1649315 5.63 1747666 21 90610 1691905 5.08 1782515 22 99192 1665714 5.62 1764906 23 86920 1676333 4.93 1763253 24 101390 1667833 5.73 1769223 25 83407 1675787 4.74 1759194 26 99493 1664726 5.64 1764219 27 86540 1694379 4.86 1780919 28 97161 1687482 5.44 1784643 29 84648 1685337 4.78 1769985 30 98085 1689693 5.49 1787778 31 81245 1696627 4.57 1777872 32 96059 1719631 5.29 1815690 33 82059 1712987 4.57 1795046 34 95819 1699230 5.34 1795049 35 80985 1719952 4.50 1800937 36 95038 1706063 5.28 1801101 37 79324 1692916 4.48 1772240 38 93513 1685158 5.26 1778671 39 82970 1706762 4.64 1789732 40 89678 1688023 5.04 1777701 41 82126 1701553 4.60 1783679 42 94172 1706223 5.23 1800395 43 79718 1692196 4.50 1771914 44 92693 1675300 5.24 1767993 45 81266 1685740 4.60 1767006 46 90723 1667930 5.16 1758653 47 81588 1677948 4.64 1759536 48 89567 1667373 5.10 1756940 49 81060 1658659 4.66 1739719 50 88086 1648773 5.07 1736859 51 82044 1658588 4.71 1740632 52 85627 1652985 4.93 1738612 53 79448 1647398 4.60 1726846 54 89273 1633837 5.18 1723110 55 76070 1633189 4.45 1709259 56 84017 1618353 4.94 1702370 57 77436 1614525 4.58 1691961 58 83212 1595382 4.96 1678594 59 77414 1619136 4.56 1696550 60 82715 1608970 4.89 1691685 61 74741 1601997 4.46 1676738 62 83181 1575325 5.02 1658506 63 73755 1570707 4.49 1644462 64 80600 1557101 4.92 1637701 65 72378 1554964 4.45 1627342 66 82932 1546226 5.09 1629158 67 69971 1539844 4.35 1609815 68 78529 1519373 4.91 1597902 69 72960 1515646 4.59 1588606 70 77531 1492918 4.94 1570449 71 68410 1487283 4.40 1555693 72 76927 1466309 4.98 1543236 73 65242 1453685 4.30 1518927 74 77052 1438247 5.08 1515299 75 65093 1434868 4.34 1499961 76 72231 1418709 4.84 1490940 77 65734 1408805 4.46 1474539 78 71471 1393232 4.88 1464703 79 62741 1385734 4.33 1448475 80 69309 1380600 4.78 1449909 81 62435 1358849 4.39 1421284 82 67734 1334626 4.83 1402360 83 58650 1333108 4.21 1391758 84 68603 1327641 4.91 1396244 85 58904 1319761 4.27 1378665 86 64346 1308660 4.69 1373006 87 57840 1299511 4.26 1357351 88 61090 1270086 4.59 1331176 89 58734 1252912 4.48 1311646 90 61937 1242306 4.75 1304243 91 53257 1228727 4.15 1281984 92 58384 1220991 4.56 1279375 93 54810 1210772 4.33 1265582 94 57901 1183670 4.66 1241571 95 52016 1181324 4.22 1233340 96 55648 1159587 4.58 1215235 97 50223 1147010 4.19 1197233 98 53731 1139407 4.50 1193138 99 50963 1128282 4.32 1179245 100 51573 1107305 4.45 1158878 101 47542 1096129 4.16 1143671 102 52281 1080842 4.61 1133123 103 45666 1068792 4.10 1114458 104 49752 1056860 4.50 1106612 105 45983 1045730 4.21 1091713 106 48026 1023053 4.48 1071079 107 44536 1014434 4.21 1058970 108 47210 997442 4.52 1044652 109 43037 993958 4.15 1036995 110 45772 971181 4.50 1016953 111 42221 966263 4.19 1008484 112 44071 957033 4.40 1001104 113 40299 940935 4.11 981234 114 44577 926972 4.59 971549 115 38293 909658 4.04 947951 116 42615 897183 4.53 939798 117 37981 891283 4.09 929264 118 40185 875261 4.39 915446 119 37649 871088 4.14 908737 120 39168 860104 4.36 899272 121 35520 845343 4.03 880863 122 38413 830042 4.42 868455 123 35189 822482 4.10 857671 124 37721 801973 4.49 839694 125 33246 795317 4.01 828563 126 37079 779649 4.54 816728 127 32235 773643 4.00 805878 128 33987 761436 4.27 795423 129 33808 756192 4.28 790000 130 33560 738536 4.35 772096 131 31289 729606 4.11 760895 132 33240 722016 4.40 755256 133 29781 714785 4.00 744566 134 32986 702776 4.48 735762 135 29519 690412 4.10 719931 136 30202 677142 4.27 707344 137 29297 674674 4.16 703971 138 31219 659823 4.52 691042 139 29239 654199 4.28 683438 140 29184 641952 4.35 671136 141 28971 634886 4.36 663857 142 29888 622307 4.58 652195 143 27222 610802 4.27 638024 144 25463 578501 4.22 603964 145 17099 284380 5.67 301479 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 34060 22679 60.03 56739 2 34411 20747 62.39 55158 3 38431 19985 65.79 58416 4 39584 19112 67.44 58696 5 40738 17519 69.93 58257 6 44322 16973 72.31 61295 7 49795 16571 75.03 66366 8 47569 15581 75.33 63150 9 44116 15675 73.78 59791 10 43065 15640 73.36 58705 11 44387 15437 74.20 59824 12 41874 15158 73.42 57032 13 41348 14027 74.67 55375 14 42681 14195 75.04 56876 15 42054 14049 74.96 56103 16 42219 13777 75.40 55996 17 41363 13563 75.31 54926 18 41613 13374 75.68 54987 19 40924 13497 75.20 54421 20 39269 12444 75.94 51713 21 39873 12467 76.18 52340 22 38566 11938 76.36 50504 23 39021 12020 76.45 51041 24 36753 11984 75.41 48737 25 36723 11700 75.84 48423 26 35480 10886 76.52 46366 27 36054 10924 76.75 46978 28 35351 10729 76.72 46080 29 35961 10733 77.01 46694 30 34377 10555 76.51 44932 31 33363 10382 76.27 43745 32 32340 9520 77.26 41860 33 32454 9870 76.68 42324 34 31846 9271 77.45 41117 35 31631 9432 77.03 41063 36 30328 9173 76.78 39501 37 31216 9194 77.25 40410 38 29348 8613 77.31 37961 39 29410 8622 77.33 38032 40 28314 8572 76.76 36886 41 29865 8491 77.86 38356 42 27416 8164 77.05 35580 43 28301 8364 77.19 36665 44 27014 7697 77.83 34711 45 26619 7663 77.65 34282 46 26164 7627 77.43 33791 47 27199 7656 78.03 34855 48 26824 7504 78.14 34328 49 25214 7438 77.22 32652 50 24145 7046 77.41 31191 51 23922 7052 77.23 30974 52 23220 6859 77.20 30079 53 23909 6950 77.48 30859 54 22874 6504 77.86 29378 55 22441 6666 77.10 29107 56 21392 6165 77.63 27557 57 21745 6409 77.24 28154 58 21363 6324 77.16 27687 59 20751 6307 76.69 27058 60 20436 5943 77.47 26379 61 20523 5935 77.57 26458 62 20174 5949 77.23 26123 63 20246 5670 78.12 25916 64 19101 5482 77.70 24583 65 18573 5463 77.27 24036 66 18381 5532 76.87 23913 67 18365 5360 77.41 23725 68 17930 5110 77.82 23040 69 17892 5254 77.30 23146 70 17179 4980 77.53 22159 71 17211 4999 77.49 22210 72 17080 4978 77.43 22058 73 16703 4950 77.14 21653 74 16417 4655 77.91 21072 75 16219 4756 77.33 20975 76 15676 4608 77.28 20284 77 16263 4742 77.42 21005 78 15583 4437 77.84 20020 79 14929 4373 77.34 19302 80 15651 4375 78.15 20026 81 14384 4125 77.71 18509 82 14245 4078 77.74 18323 83 14225 4145 77.44 18370 84 13749 4057 77.22 17806 85 13561 3974 77.34 17535 86 13441 3829 77.83 17270 87 13126 3800 77.55 16926 88 13254 3849 77.50 17103 89 13155 3829 77.46 16984 90 13041 3692 77.94 16733 91 12715 3638 77.75 16353 92 12702 3583 78.00 16285 93 12131 3454 77.84 15585 94 11831 3463 77.36 15294 95 11531 3549 76.47 15080 96 11558 3381 77.37 14939 97 11280 3178 78.02 14458 98 11037 3212 77.46 14249 99 11209 3065 78.53 14274 100 10933 3076 78.04 14009 101 10738 3138 77.39 13876 102 10466 2908 78.26 13374 103 10537 2992 77.88 13529 104 9981 2885 77.58 12866 105 9942 2968 77.01 12910 106 9998 2872 77.68 12870 107 9756 2789 77.77 12545 108 9881 2727 78.37 12608 109 9227 2865 76.31 12092 110 9200 2616 77.86 11816 111 9045 2661 77.27 11706 112 9085 2634 77.52 11719 113 8865 2536 77.76 11401 114 8355 2587 76.36 10942 115 8386 2480 77.18 10866 116 8254 2398 77.49 10652 117 8131 2437 76.94 10568 118 7604 2322 76.61 9926 119 8109 2522 76.28 10631 120 7550 2266 76.92 9816 121 7693 2241 77.44 9934 122 7318 2223 76.70 9541 123 7356 2243 76.63 9599 124 7385 2192 77.11 9577 125 6953 2124 76.60 9077 126 6975 2062 77.18 9037 127 6950 2141 76.45 9091 128 6657 2068 76.30 8725 129 6671 2055 76.45 8726 130 6689 2044 76.59 8733 131 6476 2105 75.47 8581 132 6238 1913 76.53 8151 133 6149 1910 76.30 8059 134 5677 1818 75.74 7495 135 5870 1873 75.81 7743 136 5884 1737 77.21 7621 137 5710 1753 76.51 7463 138 5694 1772 76.27 7466 139 5547 1687 76.68 7234 140 5390 1630 76.78 7020 141 5318 1705 75.72 7023 142 5135 1654 75.64 6789 143 4914 1668 74.66 6582 144 4904 1554 75.94 6458 145 3770 730 83.78 4500 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 9889 319583 3.00 329472 2 8751 219818 3.83 228569 3 7257 200281 3.50 207538 4 5190 203203 2.49 208393 5 6788 199061 3.30 205849 6 9483 192625 4.69 202108 7 4448 191433 2.27 195881 8 4325 191872 2.20 196197 9 3679 186518 1.93 190197 10 3782 185964 1.99 189746 11 4523 183863 2.40 188386 12 3186 189936 1.65 193122 13 3183 176768 1.77 179951 14 3007 177339 1.67 180346 15 3111 172894 1.77 176005 16 2708 174490 1.53 177198 17 2532 167949 1.49 170481 18 2231 168448 1.31 170679 19 2186 164222 1.31 166408 20 2064 167911 1.21 169975 21 1946 161250 1.19 163196 22 1870 159990 1.16 161860 23 1719 157055 1.08 158774 24 1718 155050 1.10 156768 25 1566 153060 1.01 154626 26 1628 154683 1.04 156311 27 1530 145477 1.04 147007 28 1448 145474 0.99 146922 29 1299 143443 0.90 144742 30 1493 143929 1.03 145422 31 1300 136976 0.94 138276 32 1414 140379 1.00 141793 33 1116 135911 0.81 137027 34 1363 135963 0.99 137326 35 1139 133488 0.85 134627 36 1388 135058 1.02 136446 37 1083 127167 0.84 128250 38 1171 128907 0.90 130078 39 1076 124151 0.86 125227 40 1210 122936 0.97 124146 41 965 118190 0.81 119155 42 1023 121392 0.84 122415 43 954 116633 0.81 117587 44 988 116177 0.84 117165 45 1086 112328 0.96 113414 46 994 113243 0.87 114237 47 960 108563 0.88 109523 48 894 106487 0.83 107381 49 965 103940 0.92 104905 50 963 105568 0.90 106531 51 941 100694 0.93 101635 52 861 100838 0.85 101699 53 886 97623 0.90 98509 54 862 99523 0.86 100385 55 844 94336 0.89 95180 56 835 98565 0.84 99400 57 792 91114 0.86 91906 58 845 91940 0.91 92785 59 790 89213 0.88 90003 60 808 89709 0.89 90517 61 881 87917 0.99 88798 62 764 86906 0.87 87670 63 729 82657 0.87 83386 64 768 84014 0.91 84782 65 758 81941 0.92 82699 66 734 81852 0.89 82586 67 695 78799 0.87 79494 68 693 80084 0.86 80777 69 677 76904 0.87 77581 70 721 77802 0.92 78523 71 718 75529 0.94 76247 72 671 75653 0.88 76324 73 691 73517 0.93 74208 74 707 73242 0.96 73949 75 703 71251 0.98 71954 76 682 72315 0.93 72997 77 622 68202 0.90 68824 78 681 68025 0.99 68706 79 616 65575 0.93 66191 80 661 67168 0.97 67829 81 589 63342 0.92 63931 82 625 64840 0.95 65465 83 557 61394 0.90 61951 84 597 62827 0.94 63424 85 603 60036 0.99 60639 86 649 59964 1.07 60613 87 494 58437 0.84 58931 88 594 58967 1.00 59561 89 486 55681 0.87 56167 90 583 58119 0.99 58702 91 559 57324 0.97 57883 92 541 56098 0.96 56639 93 556 52694 1.04 53250 94 484 52714 0.91 53198 95 523 52263 0.99 52786 96 509 52385 0.96 52894 97 533 50061 1.05 50594 98 455 50794 0.89 51249 99 521 48814 1.06 49335 100 443 49266 0.89 49709 101 456 48212 0.94 48668 102 470 47484 0.98 47954 103 436 45198 0.96 45634 104 454 47530 0.95 47984 105 397 43729 0.90 44126 106 401 44252 0.90 44653 107 462 43134 1.06 43596 108 422 44101 0.95 44523 109 454 41980 1.07 42434 110 439 41310 1.05 41749 111 448 40989 1.08 41437 112 403 41170 0.97 41573 113 399 39029 1.01 39428 114 357 39618 0.89 39975 115 366 37862 0.96 38228 116 385 38958 0.98 39343 117 372 37001 1.00 37373 118 375 36493 1.02 36868 119 358 35607 1.00 35965 120 340 36474 0.92 36814 121 342 35011 0.97 35353 122 346 34852 0.98 35198 123 326 33727 0.96 34053 124 361 34584 1.03 34945 125 355 32819 1.07 33174 126 356 32699 1.08 33055 127 321 31612 1.01 31933 128 295 32305 0.90 32600 129 291 30908 0.93 31199 130 311 30732 1.00 31043 131 295 30296 0.96 30591 132 340 30151 1.12 30491 133 251 28923 0.86 29174 134 304 28881 1.04 29185 135 292 27566 1.05 27858 136 289 28659 1.00 28948 137 276 26780 1.02 27056 138 262 26826 0.97 27088 139 321 26802 1.18 27123 140 279 26947 1.02 27226 141 273 26117 1.03 26390 142 271 25897 1.04 26168 143 295 24529 1.19 24824 144 268 23405 1.13 23673 145 170 10417 1.61 10587 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 50729 538168 8.61 588897 2 48316 601120 7.44 649436 3 42313 583692 6.76 626005 4 38479 553536 6.50 592015 5 34043 526767 6.07 560810 6 37119 512238 6.76 549357 7 32066 495992 6.07 528058 8 32470 488490 6.23 520960 9 30326 484120 5.89 514446 10 32319 471992 6.41 504311 11 29363 469016 5.89 498379 12 29751 457320 6.11 487071 13 25067 445303 5.33 470370 14 28982 444776 6.12 473758 15 25480 437400 5.50 462880 16 26522 424742 5.88 451264 17 23508 419903 5.30 443411 18 25834 409076 5.94 434910 19 21951 408900 5.09 430851 20 23477 398130 5.57 421607 21 21322 405138 5.00 426460 22 23297 393519 5.59 416816 23 19849 389453 4.85 409302 24 23000 378780 5.72 401780 25 18300 380837 4.58 399137 26 21616 369816 5.52 391432 27 18391 373534 4.69 391925 28 20332 364950 5.28 385282 29 17292 359272 4.59 376564 30 20159 353567 5.39 373726 31 16253 352836 4.40 369089 32 19326 350453 5.23 369779 33 15984 347048 4.40 363032 34 18703 339191 5.23 357894 35 15071 337097 4.28 352168 36 18256 328676 5.26 346932 37 14475 320534 4.32 335009 38 17201 318543 5.12 335744 39 14982 316228 4.52 331210 40 16251 307621 5.02 323872 41 14480 307387 4.50 321867 42 17102 300328 5.39 317430 43 13527 294359 4.39 307886 44 16701 286396 5.51 303097 45 13491 285269 4.52 298760 46 15881 279348 5.38 295229 47 13467 280754 4.58 294221 48 15347 273557 5.31 288904 49 13427 270168 4.73 283595 50 14883 262915 5.36 277798 51 13468 260694 4.91 274162 52 14189 257297 5.23 271486 53 12572 255229 4.69 267801 54 15068 250129 5.68 265197 55 11658 248820 4.48 260478 56 13763 242419 5.37 256182 57 12112 239927 4.81 252039 58 13409 232797 5.45 246206 59 12129 235142 4.91 247271 60 13037 231519 5.33 244556 61 11335 226385 4.77 237720 62 12972 220269 5.56 233241 63 10920 217010 4.79 227930 64 12386 216261 5.42 228647 65 10519 213818 4.69 224337 66 12541 209355 5.65 221896 67 9921 208929 4.53 218850 68 11752 201286 5.52 213038 69 10704 200145 5.08 210849 70 11448 196138 5.51 207586 71 9851 193085 4.85 202936 72 11167 190807 5.53 201974 73 9182 187711 4.66 196893 74 11417 183832 5.85 195249 75 9173 183107 4.77 192280 76 10281 179215 5.43 189496 77 9144 176944 4.91 186088 78 10563 173916 5.73 184479 79 8881 173201 4.88 182082 80 9798 170366 5.44 180164 81 8611 167473 4.89 176084 82 9788 163823 5.64 173611 83 8052 163139 4.70 171191 84 9743 161589 5.69 171332 85 8031 158739 4.82 166770 86 8956 156549 5.41 165505 87 7782 155068 4.78 162850 88 8486 151339 5.31 159825 89 7736 149862 4.91 157598 90 8704 146712 5.60 155416 91 6910 144483 4.56 151393 92 8165 144508 5.35 152673 93 7285 142811 4.85 150096 94 7817 138982 5.32 146799 95 6682 137159 4.65 143841 96 7534 134133 5.32 141667 97 6481 133618 4.63 140099 98 7276 132061 5.22 139337 99 6597 129755 4.84 136352 100 6759 127284 5.04 134043 101 6182 125276 4.70 131458 102 7091 123775 5.42 130866 103 5701 122553 4.45 128254 104 6607 120971 5.18 127578 105 5784 119191 4.63 124975 106 6252 116515 5.09 122767 107 5424 116190 4.46 121614 108 6209 113215 5.20 119424 109 5293 112993 4.47 118286 110 5877 109324 5.10 115201 111 5258 108135 4.64 113393 112 5573 107198 4.94 112771 113 5001 105698 4.52 110699 114 5660 103118 5.20 108778 115 4549 101457 4.29 106006 116 5366 99798 5.10 105164 117 4659 99980 4.45 104639 118 5114 97235 5.00 102349 119 4599 97119 4.52 101718 120 4905 95204 4.90 100109 121 4153 92749 4.29 96902 122 4711 92336 4.85 97047 123 4147 91554 4.33 95701 124 4630 88905 4.95 93535 125 3797 88997 4.09 92794 126 4549 87320 4.95 91869 127 3793 86052 4.22 89845 128 4061 83792 4.62 87853 129 4053 84092 4.60 88145 130 4061 81508 4.75 85569 131 3597 80318 4.29 83915 132 4122 78986 4.96 83108 133 3314 78350 4.06 81664 134 3969 77105 4.90 81074 135 3398 75656 4.30 79054 136 3535 74294 4.54 77829 137 3315 74494 4.26 77809 138 3612 73096 4.71 76708 139 3300 71618 4.40 74918 140 3396 69957 4.63 73353 141 3089 68916 4.29 72005 142 3307 68118 4.63 71425 143 2819 66969 4.04 69788 144 2827 61710 4.38 64537 145 1545 30416 4.83 31961