CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 178213 96729 64.82 274942 2 173639 88482 66.24 262121 3 198657 90424 68.72 289081 4 212691 87895 70.76 300586 5 212704 83738 71.75 296442 6 238948 80894 74.71 319842 7 256333 81365 75.91 337698 8 252526 79777 75.99 332303 9 248773 81341 75.36 330114 10 239713 78590 75.31 318303 11 244646 80109 75.33 324755 12 241922 76907 75.88 318829 13 244907 79775 75.43 324682 14 249551 78733 76.02 328284 15 259319 80126 76.39 339445 16 260585 79334 76.66 339919 17 264335 80411 76.68 344746 18 266431 82239 76.41 348670 19 262050 80148 76.58 342198 20 251338 77210 76.50 328548 21 263113 79586 76.78 342699 22 260725 77837 77.01 338562 23 257122 79033 76.49 336155 24 258842 78684 76.69 337526 25 261284 78181 76.97 339465 26 254058 77314 76.67 331372 27 253298 76748 76.75 330046 28 263711 78045 77.16 341756 29 262205 77248 77.24 339453 30 266285 78611 77.21 344896 31 258465 77631 76.90 336096 32 263857 77538 77.29 341395 33 265322 77962 77.29 343284 34 264344 77837 77.25 342181 35 261239 78063 76.99 339302 36 258896 76507 77.19 335403 37 260753 76597 77.29 337350 38 260680 76205 77.38 336885 39 261065 75797 77.50 336862 40 254260 75250 77.16 329510 41 261754 76003 77.50 337757 42 253232 74373 77.30 327605 43 258527 76384 77.19 334911 44 255039 74939 77.29 329978 45 254417 74656 77.31 329073 46 248512 73555 77.16 322067 47 256949 74367 77.55 331316 48 257239 74488 77.55 331727 49 254315 74035 77.45 328350 50 247921 72988 77.26 320909 51 252094 73061 77.53 325155 52 247246 72953 77.22 320199 53 252011 74867 77.10 326878 54 249154 73081 77.32 322235 55 248823 73253 77.26 322076 56 247011 71315 77.60 318326 57 245923 73116 77.08 319039 58 248607 73549 77.17 322156 59 241285 71015 77.26 312300 60 238511 71796 76.86 310307 61 238547 70788 77.12 309335 62 233167 69590 77.01 302757 63 238973 70456 77.23 309429 64 228718 68767 76.88 297485 65 226962 68771 76.75 295733 66 222076 69160 76.25 291236 67 221893 66727 76.88 288620 68 227990 67256 77.22 295246 69 225544 66974 77.10 292518 70 216543 65218 76.85 281761 71 213880 63838 77.01 277718 72 215779 64601 76.96 280380 73 214210 65506 76.58 279716 74 213751 63611 77.07 277362 75 212370 62946 77.14 275316 76 208685 62826 76.86 271511 77 214091 63089 77.24 277180 78 207042 61412 77.12 268454 79 203391 61482 76.79 264873 80 201648 60265 76.99 261913 81 193372 59329 76.52 252701 82 189668 58001 76.58 247669 83 189383 58284 76.47 247667 84 189006 57903 76.55 246909 85 186646 57651 76.40 244297 86 187434 56353 76.88 243787 87 182279 55478 76.67 237757 88 183862 54835 77.03 238697 89 185919 55792 76.92 241711 90 178032 53955 76.74 231987 91 172638 52754 76.59 225392 92 170848 52698 76.43 223546 93 166576 52052 76.19 218628 94 168690 51211 76.71 219901 95 166000 50760 76.58 216760 96 164264 50888 76.35 215152 97 161561 50244 76.28 211805 98 159226 48376 76.70 207602 99 154866 47850 76.40 202716 100 150552 46721 76.32 197273 101 149610 45426 76.71 195036 102 148762 46250 76.28 195012 103 148891 46337 76.27 195228 104 143252 44927 76.13 188179 105 142727 44235 76.34 186962 106 143193 44370 76.34 187563 107 139429 43864 76.07 183293 108 137056 42616 76.28 179672 109 131730 41890 75.87 173620 110 128853 41044 75.84 169897 111 128315 40679 75.93 168994 112 127506 40571 75.86 168077 113 122673 39360 75.71 162033 114 122878 39436 75.70 162314 115 121534 38031 76.17 159565 116 118274 37974 75.70 156248 117 113864 37401 75.27 151265 118 110954 36328 75.33 147282 119 109683 35478 75.56 145161 120 108181 35215 75.44 143396 121 106428 34583 75.47 141011 122 105288 33810 75.69 139098 123 103403 33630 75.46 137033 124 103011 33862 75.26 136873 125 99850 32559 75.41 132409 126 97422 32183 75.17 129605 127 94981 31692 74.98 126673 128 91529 30713 74.88 122242 129 91149 30567 74.89 121716 130 90360 31118 74.38 121478 131 91283 30491 74.96 121774 132 88239 28899 75.33 117138 133 86526 29240 74.74 115766 134 83281 28225 74.69 111506 135 81923 27618 74.79 109541 136 81049 27195 74.88 108244 137 78621 26533 74.77 105154 138 77035 26284 74.56 103319 139 76127 26079 74.48 102206 140 74420 26476 73.76 100896 141 72978 25938 73.78 98916 142 72263 26093 73.47 98356 143 70685 25143 73.76 95828 144 69814 23381 74.91 93195 145 58773 12038 83.00 70811 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 31063 1235160 2.45 1266223 2 27063 827152 3.17 854215 3 21930 793256 2.69 815186 4 16120 803455 1.97 819575 5 18510 801879 2.26 820389 6 23459 798988 2.85 822447 7 13567 812031 1.64 825598 8 12646 819207 1.52 831853 9 11103 802524 1.36 813627 10 10684 827661 1.27 838345 11 12285 844293 1.43 856578 12 9631 865161 1.10 874792 13 10154 833463 1.20 843617 14 9281 827416 1.11 836697 15 9882 846242 1.15 856124 16 8745 859949 1.01 868694 17 8546 824437 1.03 832983 18 7687 847269 0.90 854956 19 7720 850893 0.90 858613 20 7415 871537 0.84 878952 21 7224 849670 0.84 856894 22 7168 851602 0.83 858770 23 6968 854659 0.81 861627 24 6891 851553 0.80 858444 25 6339 847557 0.74 853896 26 6823 882934 0.77 889757 27 6119 834985 0.73 841104 28 6502 844640 0.76 851142 29 5968 854327 0.69 860295 30 6570 851662 0.77 858232 31 5806 837789 0.69 843595 32 6530 856887 0.76 863417 33 5655 848345 0.66 854000 34 6595 849350 0.77 855945 35 5807 849236 0.68 855043 36 6662 869257 0.76 875919 37 5603 847002 0.66 852605 38 6515 853571 0.76 860086 39 5837 838805 0.69 844642 40 6205 845024 0.73 851229 41 5940 848318 0.70 854258 42 6169 858127 0.71 864296 43 6132 860912 0.71 867044 44 6244 860093 0.72 866337 45 5901 845674 0.69 851575 46 6189 849351 0.72 855540 47 6237 832875 0.74 839112 48 6035 835120 0.72 841155 49 6565 835707 0.78 842272 50 6447 840497 0.76 846944 51 6747 820230 0.82 826977 52 6414 831103 0.77 837517 53 6808 830017 0.81 836825 54 6532 815317 0.79 821849 55 6793 807321 0.83 814114 56 6609 808555 0.81 815164 57 7166 790480 0.90 797646 58 7066 805831 0.87 812897 59 7318 795844 0.91 803162 60 6784 792237 0.85 799021 61 7230 779144 0.92 786374 62 6878 773706 0.88 780584 63 6932 772621 0.89 779553 64 7152 775548 0.91 782700 65 7129 759897 0.93 767026 66 7133 756985 0.93 764118 67 7272 749532 0.96 756804 68 7364 763403 0.96 770767 69 7142 743476 0.95 750618 70 7457 744516 0.99 751973 71 7321 730383 0.99 737704 72 7559 732519 1.02 740078 73 7329 715148 1.01 722477 74 7787 722798 1.07 730585 75 7457 711839 1.04 719296 76 7701 709431 1.07 717132 77 7476 693553 1.07 701029 78 8023 687010 1.15 695033 79 7500 680151 1.09 687651 80 7752 683523 1.12 691275 81 7484 664500 1.11 671984 82 7799 662783 1.16 670582 83 7591 650151 1.15 657742 84 7627 645815 1.17 653442 85 7471 636465 1.16 643936 86 7633 631868 1.19 639501 87 7529 616842 1.21 624371 88 7443 617575 1.19 625018 89 7307 596458 1.21 603765 90 7571 598627 1.25 606198 91 7620 591477 1.27 599097 92 7449 587286 1.25 594735 93 7544 569166 1.31 576710 94 7287 561170 1.28 568457 95 7312 555871 1.30 563183 96 7344 560099 1.29 567443 97 7546 547707 1.36 555253 98 7368 543682 1.34 551050 99 7339 542213 1.34 549552 100 7076 535857 1.30 542933 101 7299 511503 1.41 518802 102 7078 514643 1.36 521721 103 7137 498743 1.41 505880 104 6974 506743 1.36 513717 105 7141 484036 1.45 491177 106 7068 482218 1.44 489286 107 6888 477297 1.42 484185 108 6949 470377 1.46 477326 109 6759 458860 1.45 465619 110 6646 451767 1.45 458413 111 6648 441808 1.48 448456 112 6618 444120 1.47 450738 113 6682 426990 1.54 433672 114 6682 422623 1.56 429305 115 6325 419212 1.49 425537 116 6620 417285 1.56 423905 117 6449 402846 1.58 409295 118 6168 396971 1.53 403139 119 6416 391074 1.61 397490 120 6520 391826 1.64 398346 121 6162 382439 1.59 388601 122 6154 376394 1.61 382548 123 6096 363923 1.65 370019 124 6142 365050 1.65 371192 125 5946 354845 1.65 360791 126 6127 350506 1.72 356633 127 5708 343160 1.64 348868 128 5594 336908 1.63 342502 129 5590 326146 1.69 331736 130 5443 323260 1.66 328703 131 5522 318377 1.70 323899 132 5470 313294 1.72 318764 133 5329 300690 1.74 306019 134 5453 296084 1.81 301537 135 5405 289382 1.83 294787 136 5337 291639 1.80 296976 137 5335 283204 1.85 288539 138 5297 276523 1.88 281820 139 5122 272117 1.85 277239 140 5497 270938 1.99 276435 141 5834 267603 2.13 273437 142 6104 264597 2.25 270701 143 6448 254619 2.47 261067 144 6163 242004 2.48 248167 145 4695 125049 3.62 129744 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 135676 2172831 5.88 2308507 2 124501 2460570 4.82 2585071 3 113891 2436498 4.47 2550389 4 94449 2348262 3.87 2442711 5 84030 2265716 3.58 2349746 6 82476 2247780 3.54 2330256 7 74143 2196999 3.26 2271142 8 69944 2197744 3.08 2267688 9 67911 2157009 3.05 2224920 10 66475 2159392 2.99 2225867 11 65243 2189272 2.89 2254515 12 61208 2142298 2.78 2203506 13 57047 2115993 2.63 2173040 14 59499 2136153 2.71 2195652 15 59325 2131778 2.71 2191103 16 57059 2118718 2.62 2175777 17 54899 2092086 2.56 2146985 18 55197 2091771 2.57 2146968 19 51275 2083890 2.40 2135165 20 53171 2076207 2.50 2129378 21 50384 2117808 2.32 2168192 22 53186 2096704 2.47 2149890 23 47544 2110015 2.20 2157559 24 52801 2093979 2.46 2146780 25 45513 2095345 2.13 2140858 26 51460 2107717 2.38 2159177 27 45534 2139841 2.08 2185375 28 49747 2134362 2.28 2184109 29 44074 2127356 2.03 2171430 30 49684 2140436 2.27 2190120 31 42028 2134778 1.93 2176806 32 48160 2173597 2.17 2221757 33 42095 2165710 1.91 2207805 34 47979 2151431 2.18 2199410 35 41633 2166598 1.89 2208231 36 47470 2145388 2.16 2192858 37 40748 2126350 1.88 2167098 38 46139 2135607 2.11 2181746 39 42295 2156132 1.92 2198427 40 44902 2134911 2.06 2179813 41 42393 2146460 1.94 2188853 42 46585 2150563 2.12 2197148 43 41751 2131982 1.92 2173733 44 46081 2125196 2.12 2171277 45 42974 2127160 1.98 2170134 46 44971 2115305 2.08 2160276 47 43616 2122455 2.01 2166071 48 45101 2125701 2.08 2170802 49 43651 2103550 2.03 2147201 50 44565 2103521 2.07 2148086 51 43826 2103268 2.04 2147094 52 44305 2103126 2.06 2147431 53 43266 2092344 2.03 2135610 54 45555 2077446 2.15 2123001 55 42454 2069557 2.01 2112011 56 44525 2064381 2.11 2108906 57 43656 2050271 2.08 2093927 58 44252 2031895 2.13 2076147 59 43854 2054910 2.09 2098764 60 44719 2051347 2.13 2096066 61 43741 2032538 2.11 2076279 62 46510 2004139 2.27 2050649 63 42997 1998005 2.11 2041002 64 45183 1975035 2.24 2020218 65 41974 1968319 2.09 2010293 66 45940 1962240 2.29 2008180 67 41642 1943810 2.10 1985452 68 44867 1931088 2.27 1975955 69 42694 1922785 2.17 1965479 70 45195 1903097 2.32 1948292 71 41755 1887397 2.16 1929152 72 45090 1856934 2.37 1902024 73 40514 1837494 2.16 1878008 74 45638 1820261 2.45 1865899 75 40926 1815278 2.20 1856204 76 43940 1794348 2.39 1838288 77 41340 1773935 2.28 1815275 78 43768 1762882 2.42 1806650 79 40552 1747412 2.27 1787964 80 43216 1734740 2.43 1777956 81 40143 1705373 2.30 1745516 82 42132 1670474 2.46 1712606 83 38879 1669531 2.28 1708410 84 43137 1660327 2.53 1703464 85 39006 1640437 2.32 1679443 86 41634 1627531 2.49 1669165 87 39312 1610724 2.38 1650036 88 39483 1570848 2.45 1610331 89 38973 1544116 2.46 1583089 90 40022 1539430 2.53 1579452 91 37194 1512120 2.40 1549314 92 38460 1497910 2.50 1536370 93 37730 1483576 2.48 1521306 94 38432 1452755 2.58 1491187 95 36298 1446538 2.45 1482836 96 37010 1418515 2.54 1455525 97 35847 1399517 2.50 1435364 98 36833 1381705 2.60 1418538 99 35588 1369722 2.53 1405310 100 35180 1343404 2.55 1378584 101 34397 1328677 2.52 1363074 102 35368 1307385 2.63 1342753 103 33138 1284491 2.51 1317629 104 34339 1268150 2.64 1302489 105 33179 1244157 2.60 1277336 106 33384 1227168 2.65 1260552 107 32222 1205731 2.60 1237953 108 32804 1190784 2.68 1223588 109 31005 1181957 2.56 1212962 110 31867 1155681 2.68 1187548 111 30796 1140958 2.63 1171754 112 31288 1127319 2.70 1158607 113 30092 1103514 2.65 1133606 114 31701 1092619 2.82 1124320 115 28830 1071679 2.62 1100509 116 30433 1056628 2.80 1087061 117 28856 1038862 2.70 1067718 118 29044 1019880 2.77 1048924 119 28934 1009959 2.79 1038893 120 28711 1000361 2.79 1029072 121 26771 974965 2.67 1001736 122 28381 957826 2.88 986207 123 26267 943593 2.71 969860 124 27520 920760 2.90 948280 125 25551 908138 2.74 933689 126 26663 890877 2.91 917540 127 25301 881114 2.79 906415 128 25573 868599 2.86 894172 129 25219 857225 2.86 882444 130 25027 837515 2.90 862542 131 23961 822988 2.83 846949 132 24751 813152 2.95 837903 133 23626 802613 2.86 826239 134 24371 788750 3.00 813121 135 23049 768183 2.91 791232 136 23235 757867 2.97 781102 137 22507 746373 2.93 768880 138 22966 733123 3.04 756089 139 22883 721080 3.08 743963 140 22890 706727 3.14 729617 141 23190 692536 3.24 715726 142 23552 685020 3.32 708572 143 23226 669451 3.35 692677 144 21940 635428 3.34 657368 145 15266 327364 4.46 342630 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 39669 29118 57.67 68787 2 39383 25774 60.44 65157 3 43708 24611 63.98 68319 4 46341 23066 66.77 69407 5 46050 21368 68.31 67418 6 50535 20042 71.60 70577 7 54658 19451 73.75 74109 8 53182 18712 73.97 71894 9 48545 18406 72.51 66951 10 47127 18558 71.75 65685 11 47820 17621 73.07 65441 12 45811 17210 72.69 63021 13 45698 16591 73.36 62289 14 46239 15873 74.44 62112 15 45625 15878 74.18 61503 16 44811 15316 74.53 60127 17 44390 15242 74.44 59632 18 45004 15490 74.39 60494 19 42931 14913 74.22 57844 20 41266 13464 75.40 54730 21 42734 13806 75.58 56540 22 41244 13416 75.46 54660 23 40387 13399 75.09 53786 24 38786 12628 75.44 51414 25 39308 12665 75.63 51973 26 37378 12097 75.55 49475 27 37725 12031 75.82 49756 28 37008 11580 76.17 48588 29 36655 11776 75.68 48431 30 36433 11539 75.95 47972 31 34445 10979 75.83 45424 32 34499 10508 76.65 45007 33 34223 10287 76.89 44510 34 32720 10244 76.16 42964 35 32290 10080 76.21 42370 36 31485 9464 76.89 40949 37 31104 9566 76.48 40670 38 29958 8939 77.02 38897 39 29769 9110 76.57 38879 40 28217 8738 76.36 36955 41 29923 8924 77.03 38847 42 27524 8252 76.93 35776 43 27789 8623 76.32 36412 44 26938 8244 76.57 35182 45 26461 7627 77.63 34088 46 25407 7760 76.60 33167 47 25898 7702 77.08 33600 48 25174 7380 77.33 32554 49 25390 7456 77.30 32846 50 23625 7168 76.72 30793 51 23090 7457 75.59 30547 52 22418 6920 76.41 29338 53 22733 6950 76.59 29683 54 21896 6687 76.60 28583 55 21111 6644 76.06 27755 56 21152 6301 77.05 27453 57 20549 6508 75.95 27057 58 20400 6053 77.12 26453 59 20108 5928 77.23 26036 60 19712 5958 76.79 25670 61 19712 5811 77.23 25523 62 19106 5867 76.51 24973 63 19035 5543 77.45 24578 64 17615 5308 76.84 22923 65 17225 5175 76.90 22400 66 17415 5302 76.66 22717 67 17123 5124 76.97 22247 68 17006 4953 77.44 21959 69 16611 4982 76.93 21593 70 16299 4846 77.08 21145 71 15754 4697 77.03 20451 72 15860 4636 77.38 20496 73 15453 4533 77.32 19986 74 15036 4517 76.90 19553 75 14992 4524 76.82 19516 76 14446 4365 76.80 18811 77 14744 4330 77.30 19074 78 14452 4220 77.40 18672 79 13985 4099 77.33 18084 80 13909 3997 77.68 17906 81 12885 3975 76.42 16860 82 12691 3847 76.74 16538 83 12743 3669 77.64 16412 84 12423 3772 76.71 16195 85 12367 3648 77.22 16015 86 12152 3522 77.53 15674 87 11891 3676 76.39 15567 88 11660 3588 76.47 15248 89 11920 3539 77.11 15459 90 11811 3447 77.41 15258 91 11084 3240 77.38 14324 92 11236 3269 77.46 14505 93 10476 3228 76.44 13704 94 10482 3176 76.75 13658 95 10357 3185 76.48 13542 96 10155 3082 76.72 13237 97 10165 2994 77.25 13159 98 9809 2806 77.76 12615 99 9507 2943 76.36 12450 100 9808 2862 77.41 12670 101 9236 2841 76.48 12077 102 9238 2672 77.57 11910 103 9250 2703 77.39 11953 104 8847 2600 77.29 11447 105 8925 2627 77.26 11552 106 8563 2522 77.25 11085 107 8544 2445 77.75 10989 108 8202 2468 76.87 10670 109 8205 2357 77.68 10562 110 7758 2332 76.89 10090 111 7420 2319 76.19 9739 112 7670 2326 76.73 9996 113 7284 2285 76.12 9569 114 7355 2345 75.82 9700 115 7248 2126 77.32 9374 116 7100 2062 77.49 9162 117 6778 2050 76.78 8828 118 6736 2093 76.29 8829 119 6742 2062 76.58 8804 120 6537 1994 76.63 8531 121 6340 1979 76.21 8319 122 6392 1933 76.78 8325 123 6241 1931 76.37 8172 124 5978 1841 76.45 7819 125 6131 1797 77.33 7928 126 5932 1876 75.97 7808 127 5694 1794 76.04 7488 128 5466 1665 76.65 7131 129 5591 1769 75.96 7360 130 5645 1725 76.59 7370 131 5666 1708 76.84 7374 132 5310 1509 77.87 6819 133 5248 1613 76.49 6861 134 5039 1567 76.28 6606 135 4966 1569 75.99 6535 136 4850 1474 76.69 6324 137 4790 1552 75.53 6342 138 4561 1494 75.33 6055 139 4667 1417 76.71 6084 140 4567 1409 76.42 5976 141 4348 1338 76.47 5686 142 4287 1412 75.22 5699 143 4253 1391 75.35 5644 144 4158 1316 75.96 5474 145 3181 581 84.56 3762 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 13129 327812 3.85 340941 2 11764 216514 5.15 228278 3 9967 196865 4.82 206832 4 6430 193607 3.21 200037 5 8841 192978 4.38 201819 6 11808 184988 6.00 196796 7 5285 186976 2.75 192261 8 4743 182700 2.53 187443 9 4401 176507 2.43 180908 10 4393 178745 2.40 183138 11 4982 176706 2.74 181688 12 3426 184357 1.82 187783 13 3557 167664 2.08 171221 14 3199 166503 1.89 169702 15 3166 162968 1.91 166134 16 2819 164609 1.68 167428 17 2706 157029 1.69 159735 18 2419 156907 1.52 159326 19 2197 153354 1.41 155551 20 2089 157002 1.31 159091 21 1964 151617 1.28 153581 22 1758 146979 1.18 148737 23 1732 146940 1.16 148672 24 1607 143685 1.11 145292 25 1494 139858 1.06 141352 26 1531 143996 1.05 145527 27 1385 134262 1.02 135647 28 1270 132330 0.95 133600 29 1227 132930 0.91 134157 30 1234 129795 0.94 131029 31 1023 126100 0.80 127123 32 1155 126796 0.90 127951 33 912 122174 0.74 123086 34 1065 121685 0.87 122750 35 930 120678 0.76 121608 36 972 121526 0.79 122498 37 842 114420 0.73 115262 38 880 115342 0.76 116222 39 826 111606 0.73 112432 40 916 109563 0.83 110479 41 730 105844 0.68 106574 42 792 106394 0.74 107186 43 707 103435 0.68 104142 44 773 102601 0.75 103374 45 706 98900 0.71 99606 46 715 98989 0.72 99704 47 767 96121 0.79 96888 48 695 95019 0.73 95714 49 667 91788 0.72 92455 50 645 91345 0.70 91990 51 666 88148 0.75 88814 52 676 86778 0.77 87454 53 662 85927 0.76 86589 54 634 83869 0.75 84503 55 662 82813 0.79 83475 56 613 82355 0.74 82968 57 578 77835 0.74 78413 58 614 78383 0.78 78997 59 635 75896 0.83 76531 60 594 75641 0.78 76235 61 569 74288 0.76 74857 62 562 72819 0.77 73381 63 546 70796 0.77 71342 64 565 71099 0.79 71664 65 581 68050 0.85 68631 66 514 67232 0.76 67746 67 512 65998 0.77 66510 68 508 66313 0.76 66821 69 518 64182 0.80 64700 70 488 63593 0.76 64081 71 481 63423 0.75 63904 72 494 62472 0.78 62966 73 476 60269 0.78 60745 74 496 59450 0.83 59946 75 450 58194 0.77 58644 76 432 57528 0.75 57960 77 422 55474 0.75 55896 78 472 55255 0.85 55727 79 375 53570 0.70 53945 80 444 54301 0.81 54745 81 403 52007 0.77 52410 82 451 52019 0.86 52470 83 400 49854 0.80 50254 84 394 49308 0.79 49702 85 337 49004 0.68 49341 86 378 47905 0.78 48283 87 402 46669 0.85 47071 88 396 46988 0.84 47384 89 368 44153 0.83 44521 90 373 45274 0.82 45647 91 374 45027 0.82 45401 92 364 43673 0.83 44037 93 350 42011 0.83 42361 94 340 41301 0.82 41641 95 353 41262 0.85 41615 96 318 40799 0.77 41117 97 345 39544 0.86 39889 98 297 38788 0.76 39085 99 328 38403 0.85 38731 100 315 38633 0.81 38948 101 324 36802 0.87 37126 102 344 36466 0.93 36810 103 288 35344 0.81 35632 104 347 35944 0.96 36291 105 282 34107 0.82 34389 106 291 33831 0.85 34122 107 286 33667 0.84 33953 108 279 33241 0.83 33520 109 250 32159 0.77 32409 110 245 31907 0.76 32152 111 268 31138 0.85 31406 112 269 31142 0.86 31411 113 243 29448 0.82 29691 114 256 29746 0.85 30002 115 225 29083 0.77 29308 116 247 28899 0.85 29146 117 253 27729 0.90 27982 118 219 27640 0.79 27859 119 235 26614 0.88 26849 120 266 27261 0.97 27527 121 199 25953 0.76 26152 122 240 25842 0.92 26082 123 210 25478 0.82 25688 124 217 25795 0.83 26012 125 196 24830 0.78 25026 126 223 24266 0.91 24489 127 189 23525 0.80 23714 128 195 23555 0.82 23750 129 207 22923 0.89 23130 130 174 22579 0.76 22753 131 214 22296 0.95 22510 132 201 22029 0.90 22230 133 178 21029 0.84 21207 134 191 21127 0.90 21318 135 192 20545 0.93 20737 136 181 20613 0.87 20794 137 169 19995 0.84 20164 138 206 19260 1.06 19466 139 186 19411 0.95 19597 140 197 19630 0.99 19827 141 169 19160 0.87 19329 142 169 18738 0.89 18907 143 157 17992 0.87 18149 144 162 16734 0.96 16896 145 133 7865 1.66 7998 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 53195 582367 8.37 635562 2 46021 647733 6.63 693754 3 42586 621340 6.41 663926 4 32723 586716 5.28 619439 5 28922 553614 4.96 582536 6 29583 542431 5.17 572014 7 26344 515794 4.86 542138 8 23724 510631 4.44 534355 9 22438 495650 4.33 518088 10 23076 488097 4.51 511173 11 22911 484043 4.52 506954 12 19512 471863 3.97 491375 13 17649 456469 3.72 474118 14 18361 452841 3.90 471202 15 17130 449944 3.67 467074 16 16829 435187 3.72 452016 17 14974 425960 3.40 440934 18 15334 417623 3.54 432957 19 13642 410343 3.22 423985 20 13857 402769 3.33 416626 21 12357 407664 2.94 420021 22 12981 396223 3.17 409204 23 11222 389728 2.80 400950 24 12249 380969 3.12 393218 25 9808 377654 2.53 387462 26 11078 369076 2.91 380154 27 9613 372025 2.52 381638 28 10182 364746 2.72 374928 29 8752 355078 2.41 363830 30 9826 351491 2.72 361317 31 8003 345451 2.26 353454 32 9101 344978 2.57 354079 33 7856 341086 2.25 348942 34 8697 333492 2.54 342189 35 7228 325873 2.17 333101 36 8127 317653 2.49 325780 37 6649 308816 2.11 315465 38 7735 306834 2.46 314569 39 6843 303907 2.20 310750 40 7152 295478 2.36 302630 41 6426 292217 2.15 298643 42 7217 286723 2.46 293940 43 6192 279352 2.17 285544 44 7140 272107 2.56 279247 45 6195 270490 2.24 276685 46 6769 263098 2.51 269867 47 5999 261958 2.24 267957 48 6446 256880 2.45 263326 49 5949 252182 2.30 258131 50 6296 246143 2.49 252439 51 5810 243114 2.33 248924 52 6035 241414 2.44 247449 53 5708 236312 2.36 242020 54 6252 232359 2.62 238611 55 5209 227146 2.24 232355 56 5658 223053 2.47 228711 57 5405 220438 2.39 225843 58 5689 214364 2.59 220053 59 5234 214550 2.38 219784 60 5516 211473 2.54 216989 61 4875 206137 2.31 211012 62 5559 199766 2.71 205325 63 4800 197784 2.37 202584 64 5335 197337 2.63 202672 65 4746 192402 2.41 197148 66 5554 189550 2.85 195104 67 4500 186162 2.36 190662 68 5031 182090 2.69 187121 69 4623 179106 2.52 183729 70 4979 175984 2.75 180963 71 4231 171958 2.40 176189 72 4809 170581 2.74 175390 73 4003 166056 2.35 170059 74 4801 163524 2.85 168325 75 4085 162243 2.46 166328 76 4523 159650 2.76 164173 77 4029 156198 2.51 160227 78 4470 153155 2.84 157625 79 3887 151349 2.50 155236 80 4132 149806 2.68 153938 81 3790 146507 2.52 150297 82 4146 143046 2.82 147192 83 3552 141793 2.44 145345 84 4137 140606 2.86 144743 85 3543 137896 2.50 141439 86 3866 135919 2.77 139785 87 3377 135052 2.44 138429 88 3657 130197 2.73 133854 89 3379 128859 2.56 132238 90 3714 127099 2.84 130813 91 3238 124386 2.54 127624 92 3540 124378 2.77 127918 93 3161 122144 2.52 125305 94 3441 119025 2.81 122466 95 2965 116461 2.48 119426 96 3322 114535 2.82 117857 97 2880 113228 2.48 116108 98 3210 111728 2.79 114938 99 2971 110142 2.63 113113 100 2916 107795 2.63 110711 101 2778 106375 2.55 109153 102 3064 104805 2.84 107869 103 2554 103208 2.41 105762 104 2876 102310 2.73 105186 105 2528 100340 2.46 102868 106 2806 98316 2.77 101122 107 2454 96331 2.48 98785 108 2654 95261 2.71 97915 109 2383 93520 2.48 95903 110 2478 91298 2.64 93776 111 2330 90066 2.52 92396 112 2487 89706 2.70 92193 113 2204 88003 2.44 90207 114 2493 86228 2.81 88721 115 2077 84276 2.41 86353 116 2183 83455 2.55 85638 117 2038 82118 2.42 84156 118 2177 80961 2.62 83138 119 2031 80405 2.46 82436 120 2080 78677 2.58 80757 121 1849 77170 2.34 79019 122 2095 75921 2.69 78016 123 1846 75101 2.40 76947 124 1949 73175 2.59 75124 125 1766 72065 2.39 73831 126 1992 71687 2.70 73679 127 1640 70234 2.28 71874 128 1776 68695 2.52 70471 129 1715 68786 2.43 70501 130 1725 66567 2.53 68292 131 1626 65389 2.43 67015 132 1775 64866 2.66 66641 133 1498 63904 2.29 65402 134 1676 62308 2.62 63984 135 1470 61973 2.32 63443 136 1530 60634 2.46 62164 137 1534 60243 2.48 61777 138 1641 58691 2.72 60332 139 1372 57999 2.31 59371 140 1484 56345 2.57 57829 141 1343 55768 2.35 57111 142 1472 55215 2.60 56687 143 1223 53971 2.22 55194 144 1210 50847 2.32 52057 145 789 24482 3.12 25271