CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 195537 103518 65.38 299055 2 192785 93658 67.30 286443 3 217667 95761 69.45 313428 4 234052 91966 71.79 326018 5 231672 87493 72.59 319165 6 265198 84941 75.74 350139 7 279193 84381 76.79 363574 8 269940 82606 76.57 352546 9 275280 83849 76.65 359129 10 261064 81524 76.20 342588 11 269505 82438 76.58 351943 12 265567 81068 76.61 346635 13 268831 82970 76.42 351801 14 273775 80793 77.21 354568 15 287948 84189 77.38 372137 16 286353 81659 77.81 368012 17 291174 83322 77.75 374496 18 294786 83963 77.83 378749 19 286377 82686 77.60 369063 20 273941 78800 77.66 352741 21 288621 81093 78.07 369714 22 286429 80424 78.08 366853 23 283763 81169 77.76 364932 24 281654 80148 77.85 361802 25 285634 81497 77.80 367131 26 279267 79080 77.93 358347 27 278964 78959 77.94 357923 28 294227 82453 78.11 376680 29 284564 79098 78.25 363662 30 287879 79555 78.35 367434 31 282848 79225 78.12 362073 32 291495 79743 78.52 371238 33 293210 80436 78.47 373646 34 287621 79218 78.41 366839 35 287565 79824 78.27 367389 36 286186 78985 78.37 365171 37 283850 78444 78.35 362294 38 287637 79632 78.32 367269 39 287988 77980 78.69 365968 40 276626 76150 78.41 352776 41 285510 77814 78.58 363324 42 278649 76686 78.42 355335 43 281953 77761 78.38 359714 44 278417 76625 78.42 355042 45 279900 76351 78.57 356251 46 273906 76296 78.21 350202 47 281269 75447 78.85 356716 48 280068 76136 78.63 356204 49 277796 75877 78.55 353673 50 270637 74644 78.38 345281 51 274683 74966 78.56 349649 52 272197 74864 78.43 347061 53 274162 75088 78.50 349250 54 274054 74275 78.68 348329 55 270345 74002 78.51 344347 56 270776 73590 78.63 344366 57 272408 73222 78.81 345630 58 271659 73941 78.61 345600 59 265295 72784 78.47 338079 60 262877 72425 78.40 335302 61 260675 72468 78.25 333143 62 256113 71083 78.28 327196 63 260060 71040 78.54 331100 64 247808 70211 77.92 318019 65 245988 69715 77.92 315703 66 241512 70343 77.44 311855 67 241777 69115 77.77 310892 68 247707 68437 78.35 316144 69 245484 67917 78.33 313401 70 234475 66205 77.98 300680 71 232307 65430 78.02 297737 72 234287 65501 78.15 299788 73 231271 65646 77.89 296917 74 231777 64789 78.15 296566 75 229358 63883 78.21 293241 76 226877 64028 77.99 290905 77 229647 64014 78.20 293661 78 220324 62715 77.84 283039 79 215899 61705 77.77 277604 80 214272 60710 77.92 274982 81 207036 59825 77.58 266861 82 204767 58623 77.74 263390 83 202368 58604 77.54 260972 84 201219 58301 77.54 259520 85 197435 57202 77.54 254637 86 199259 56933 77.78 256192 87 192539 56121 77.43 248660 88 195006 55929 77.71 250935 89 193613 55524 77.71 249137 90 187796 54503 77.51 242299 91 184576 53406 77.56 237982 92 180463 52891 77.33 233354 93 173613 51263 77.20 224876 94 175073 51201 77.37 226274 95 172353 50271 77.42 222624 96 170782 50399 77.21 221181 97 166457 49461 77.09 215918 98 164909 48448 77.29 213357 99 160569 47062 77.33 207631 100 157809 47002 77.05 204811 101 155495 46140 77.12 201635 102 153555 45341 77.20 198896 103 153301 46039 76.90 199340 104 148648 44426 76.99 193074 105 148509 44182 77.07 192691 106 146570 43184 77.24 189754 107 143794 42561 77.16 186355 108 140796 42152 76.96 182948 109 134947 41075 76.66 176022 110 132895 40336 76.72 173231 111 132326 39875 76.84 172201 112 129378 39373 76.67 168751 113 124919 39042 76.19 163961 114 124426 38384 76.42 162810 115 123103 37544 76.63 160647 116 120807 37569 76.28 158376 117 117942 37178 76.03 155120 118 113452 35795 76.02 149247 119 111310 34595 76.29 145905 120 108725 34806 75.75 143531 121 106879 33817 75.96 140696 122 106019 33005 76.26 139024 123 104740 32932 76.08 137672 124 104164 33082 75.90 137246 125 99523 31784 75.79 131307 126 98800 30557 76.38 129357 127 94976 30828 75.50 125804 128 90335 29343 75.48 119678 129 90171 29162 75.56 119333 130 89944 29626 75.22 119570 131 89279 29221 75.34 118500 132 86849 28390 75.36 115239 133 84772 27602 75.44 112374 134 81299 27306 74.86 108605 135 80586 27212 74.76 107798 136 79142 25974 75.29 105116 137 77485 25834 75.00 103319 138 74601 25362 74.63 99963 139 74249 25073 74.76 99322 140 72208 24765 74.46 96973 141 70980 25158 73.83 96138 142 70208 24570 74.08 94778 143 69696 24058 74.34 93754 144 68050 23020 74.72 91070 145 56733 11680 82.93 68413 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 31721 1237819 2.50 1269540 2 28799 832958 3.34 861757 3 22173 797380 2.71 819553 4 16468 812317 1.99 828785 5 19440 808258 2.35 827698 6 24332 804878 2.93 829210 7 13790 820994 1.65 834784 8 13690 829435 1.62 843125 9 11908 809211 1.45 821119 10 11518 839363 1.35 850881 11 13166 857771 1.51 870937 12 10497 873450 1.19 883947 13 11357 843250 1.33 854607 14 9785 832716 1.16 842501 15 10572 859939 1.21 870511 16 9630 872157 1.09 881787 17 8801 831329 1.05 840130 18 8222 862180 0.94 870402 19 8187 865844 0.94 874031 20 7700 875054 0.87 882754 21 7691 855633 0.89 863324 22 7231 865546 0.83 872777 23 7325 865720 0.84 873045 24 7172 862345 0.82 869517 25 6651 862767 0.76 869418 26 7184 903981 0.79 911165 27 6181 848135 0.72 854316 28 6682 859642 0.77 866324 29 6378 868895 0.73 875273 30 6467 862931 0.74 869398 31 5907 855911 0.69 861818 32 6777 875146 0.77 881923 33 5881 865007 0.68 870888 34 6748 861935 0.78 868683 35 5768 855667 0.67 861435 36 6720 880771 0.76 887491 37 5979 863820 0.69 869799 38 6606 863885 0.76 870491 39 5796 851644 0.68 857440 40 6422 856488 0.74 862910 41 6025 858151 0.70 864176 42 6453 870679 0.74 877132 43 6138 876825 0.70 882963 44 6362 872710 0.72 879072 45 6203 860767 0.72 866970 46 6406 863622 0.74 870028 47 6359 840972 0.75 847331 48 6291 852084 0.73 858375 49 6820 851239 0.79 858059 50 6526 854659 0.76 861185 51 6851 834856 0.81 841707 52 6615 843454 0.78 850069 53 7216 849600 0.84 856816 54 6652 821975 0.80 828627 55 7176 819875 0.87 827051 56 6696 815205 0.81 821901 57 7299 797340 0.91 804639 58 7075 810939 0.86 818014 59 7286 803891 0.90 811177 60 7155 801343 0.88 808498 61 7521 787393 0.95 794914 62 7124 777937 0.91 785061 63 7324 778836 0.93 786160 64 7159 782454 0.91 789613 65 7513 771782 0.96 779295 66 7256 761611 0.94 768867 67 7411 756601 0.97 764012 68 7591 767820 0.98 775411 69 7590 749100 1.00 756690 70 7811 749849 1.03 757660 71 7494 731746 1.01 739240 72 7994 735040 1.08 743034 73 7758 712365 1.08 720123 74 8116 725836 1.11 733952 75 8046 717637 1.11 725683 76 8190 707781 1.14 715971 77 7661 694050 1.09 701711 78 7942 683007 1.15 690949 79 7890 677866 1.15 685756 80 8249 679180 1.20 687429 81 7770 657240 1.17 665010 82 8009 655321 1.21 663330 83 7850 647615 1.20 655465 84 8017 638947 1.24 646964 85 7894 629547 1.24 637441 86 8146 620088 1.30 628234 87 7867 604901 1.28 612768 88 7786 607284 1.27 615070 89 7804 586100 1.31 593904 90 7797 584081 1.32 591878 91 7916 579661 1.35 587577 92 7762 571655 1.34 579417 93 7797 554056 1.39 561853 94 7406 547900 1.33 555306 95 7642 541433 1.39 549075 96 7422 546398 1.34 553820 97 7648 532210 1.42 539858 98 7390 528668 1.38 536058 99 7802 524604 1.47 532406 100 7628 516586 1.46 524214 101 7490 495981 1.49 503471 102 7505 495614 1.49 503119 103 7131 480953 1.46 488084 104 7471 486562 1.51 494033 105 7423 467631 1.56 475054 106 7118 463723 1.51 470841 107 7135 459628 1.53 466763 108 6882 448148 1.51 455030 109 7144 437190 1.61 444334 110 6919 429363 1.59 436282 111 6875 418149 1.62 425024 112 6869 419992 1.61 426861 113 6667 403466 1.63 410133 114 6864 399831 1.69 406695 115 6645 395417 1.65 402062 116 6721 394278 1.68 400999 117 6516 380204 1.68 386720 118 6514 373838 1.71 380352 119 6358 366460 1.71 372818 120 6397 366999 1.71 373396 121 6240 357114 1.72 363354 122 6318 353626 1.76 359944 123 6260 337019 1.82 343279 124 6539 333535 1.92 340074 125 6244 327949 1.87 334193 126 6290 324683 1.90 330973 127 5858 314744 1.83 320602 128 5804 308242 1.85 314046 129 5613 296898 1.86 302511 130 5753 294141 1.92 299894 131 5476 289613 1.86 295089 132 5574 286051 1.91 291625 133 5387 273446 1.93 278833 134 5391 266784 1.98 272175 135 5349 260253 2.01 265602 136 5283 262692 1.97 267975 137 5477 251713 2.13 257190 138 5279 248422 2.08 253701 139 5556 242167 2.24 247723 140 5487 240808 2.23 246295 141 5664 238429 2.32 244093 142 6008 235027 2.49 241035 143 6175 226536 2.65 232711 144 5892 216059 2.65 221951 145 4581 111660 3.94 116241 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 131453 2193575 5.65 2325028 2 118092 2481112 4.54 2599204 3 108858 2463506 4.23 2572364 4 86086 2364356 3.51 2450442 5 77531 2273450 3.30 2350981 6 73524 2256876 3.15 2330400 7 67419 2205634 2.97 2273053 8 61794 2206695 2.72 2268489 9 61156 2161576 2.75 2222732 10 57720 2181743 2.58 2239463 11 58369 2220580 2.56 2278949 12 51790 2159470 2.34 2211260 13 50096 2128406 2.30 2178502 14 50415 2153592 2.29 2204007 15 51227 2142437 2.34 2193664 16 48242 2130941 2.21 2179183 17 46849 2107034 2.18 2153883 18 46065 2119325 2.13 2165390 19 43605 2102542 2.03 2146147 20 44359 2103491 2.07 2147850 21 41785 2135136 1.92 2176921 22 43699 2125213 2.01 2168912 23 39483 2138784 1.81 2178267 24 42429 2123377 1.96 2165806 25 37790 2124201 1.75 2161991 26 41485 2143381 1.90 2184866 27 36996 2173654 1.67 2210650 28 40071 2164945 1.82 2205016 29 35725 2159587 1.63 2195312 30 39549 2181283 1.78 2220832 31 33786 2167032 1.54 2200818 32 38128 2209104 1.70 2247232 33 33599 2202811 1.50 2236410 34 37272 2179207 1.68 2216479 35 33031 2197759 1.48 2230790 36 36797 2174677 1.66 2211474 37 32658 2153365 1.49 2186023 38 36259 2160770 1.65 2197029 39 33502 2183256 1.51 2216758 40 34896 2164716 1.59 2199612 41 34088 2172115 1.55 2206203 42 36426 2174627 1.65 2211053 43 33677 2160124 1.54 2193801 44 35880 2159626 1.63 2195506 45 35115 2155718 1.60 2190833 46 35860 2155921 1.64 2191781 47 35408 2150658 1.62 2186066 48 35665 2157435 1.63 2193100 49 35287 2134930 1.63 2170217 50 35974 2133304 1.66 2169278 51 35920 2128763 1.66 2164683 52 35326 2129761 1.63 2165087 53 36285 2121958 1.68 2158243 54 35915 2102897 1.68 2138812 55 35281 2102731 1.65 2138012 56 35784 2087215 1.69 2122999 57 35951 2073091 1.70 2109042 58 35720 2053932 1.71 2089652 59 36294 2075770 1.72 2112064 60 36376 2077190 1.72 2113566 61 36102 2047773 1.73 2083875 62 37775 2016086 1.84 2053861 63 36071 2013003 1.76 2049074 64 37171 1986663 1.84 2023834 65 35627 1981767 1.77 2017394 66 38047 1982464 1.88 2020511 67 34853 1946545 1.76 1981398 68 37416 1943185 1.89 1980601 69 35576 1934884 1.81 1970460 70 37809 1915540 1.94 1953349 71 35148 1892640 1.82 1927788 72 37938 1857330 2.00 1895268 73 35031 1836677 1.87 1871708 74 37954 1825709 2.04 1863663 75 35161 1816336 1.90 1851497 76 37776 1793117 2.06 1830893 77 35628 1762316 1.98 1797944 78 37712 1753360 2.11 1791072 79 34990 1743501 1.97 1778491 80 36716 1721032 2.09 1757748 81 34773 1691847 2.01 1726620 82 36466 1652720 2.16 1689186 83 34638 1647576 2.06 1682214 84 36638 1638953 2.19 1675591 85 34673 1616521 2.10 1651194 86 36030 1606183 2.19 1642213 87 34713 1585244 2.14 1619957 88 34569 1537408 2.20 1571977 89 34335 1517975 2.21 1552310 90 34280 1511593 2.22 1545873 91 33444 1476117 2.22 1509561 92 34020 1462061 2.27 1496081 93 33375 1445836 2.26 1479211 94 33120 1412802 2.29 1445922 95 32461 1403629 2.26 1436090 96 32705 1380802 2.31 1413507 97 31757 1356500 2.29 1388257 98 31996 1336795 2.34 1368791 99 31525 1327600 2.32 1359125 100 31208 1300164 2.34 1331372 101 30714 1278097 2.35 1308811 102 31059 1257789 2.41 1288848 103 29431 1228210 2.34 1257641 104 30266 1211909 2.44 1242175 105 29145 1190935 2.39 1220080 106 29552 1169833 2.46 1199385 107 28250 1147708 2.40 1175958 108 28639 1132327 2.47 1160966 109 27833 1124300 2.42 1152133 110 28116 1096081 2.50 1124197 111 27056 1081797 2.44 1108853 112 27823 1063605 2.55 1091428 113 26884 1037336 2.53 1064220 114 27580 1027630 2.61 1055210 115 25589 1005582 2.48 1031171 116 26885 987349 2.65 1014234 117 25530 971402 2.56 996932 118 25880 951732 2.65 977612 119 25076 940169 2.60 965245 120 25794 927767 2.71 953561 121 23992 905260 2.58 929252 122 24953 883903 2.75 908856 123 23748 869208 2.66 892956 124 24094 848807 2.76 872901 125 22945 831798 2.68 854743 126 23178 817176 2.76 840354 127 22120 806169 2.67 828289 128 22527 793593 2.76 816120 129 22048 782073 2.74 804121 130 21980 762313 2.80 784293 131 21354 744011 2.79 765365 132 21134 736549 2.79 757683 133 21124 726306 2.83 747430 134 20860 710490 2.85 731350 135 20355 689965 2.87 710320 136 20469 677377 2.93 697846 137 20206 665278 2.95 685484 138 19962 651966 2.97 671928 139 20132 639569 3.05 659701 140 20072 627528 3.10 647600 141 20454 615458 3.22 635912 142 21209 604813 3.39 626022 143 21000 590801 3.43 611801 144 19410 561276 3.34 580686 145 14373 284537 4.81 298910 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 38355 28921 57.01 67276 2 37402 25504 59.46 62906 3 42165 23906 63.82 66071 4 44244 22473 66.32 66717 5 43612 20623 67.89 64235 6 49288 19119 72.05 68407 7 52964 18003 74.63 70967 8 49686 17437 74.02 67123 9 44931 17015 72.53 61946 10 43923 17014 72.08 60937 11 44286 16461 72.90 60747 12 42171 16347 72.07 58518 13 42308 15110 73.68 57418 14 42145 14870 73.92 57015 15 42373 14335 74.72 56708 16 41284 13806 74.94 55090 17 40161 13690 74.58 53851 18 41679 13887 75.01 55566 19 39019 13237 74.67 52256 20 36638 12179 75.05 48817 21 37982 12336 75.48 50318 22 36380 11698 75.67 48078 23 36108 11713 75.51 47821 24 34948 11218 75.70 46166 25 35016 10792 76.44 45808 26 33298 10407 76.19 43705 27 32804 10259 76.18 43063 28 32544 10210 76.12 42754 29 32427 10032 76.37 42459 30 31742 9662 76.66 41404 31 30103 9250 76.49 39353 32 29622 8816 77.06 38438 33 29276 8651 77.19 37927 34 28305 8776 76.33 37081 35 27796 8609 76.35 36405 36 26771 7996 77.00 34767 37 26242 7940 76.77 34182 38 25598 7622 77.06 33220 39 25446 7457 77.34 32903 40 24091 7133 77.16 31224 41 24311 7226 77.09 31537 42 22853 6969 76.63 29822 43 23168 6759 77.42 29927 44 22968 6815 77.12 29783 45 22116 6412 77.52 28528 46 21487 6252 77.46 27739 47 21126 6118 77.54 27244 48 20856 6137 77.26 26993 49 20525 6002 77.37 26527 50 19596 5743 77.34 25339 51 18750 5772 76.46 24522 52 18409 5520 76.93 23929 53 18251 5555 76.67 23806 54 17846 5082 77.83 22928 55 17324 5102 77.25 22426 56 16872 5007 77.12 21879 57 17048 4846 77.87 21894 58 16388 4680 77.79 21068 59 16457 4664 77.92 21121 60 15583 4646 77.03 20229 61 15503 4579 77.20 20082 62 14971 4432 77.16 19403 63 14937 4353 77.43 19290 64 13702 4249 76.33 17951 65 13607 4033 77.14 17640 66 13420 4161 76.33 17581 67 13297 4100 76.43 17397 68 13208 3772 77.79 16980 69 12938 3804 77.28 16742 70 12591 3728 77.16 16319 71 12243 3648 77.04 15891 72 12100 3643 76.86 15743 73 11912 3544 77.07 15456 74 11339 3362 77.13 14701 75 11482 3425 77.02 14907 76 10789 3155 77.37 13944 77 11275 3254 77.60 14529 78 11148 3014 78.72 14162 79 10561 2934 78.26 13495 80 10169 3103 76.62 13272 81 9764 2926 76.94 12690 82 9417 2819 76.96 12236 83 9696 2865 77.19 12561 84 9412 2772 77.25 12184 85 9172 2667 77.47 11839 86 9267 2620 77.96 11887 87 8903 2695 76.76 11598 88 8765 2719 76.32 11484 89 8737 2496 77.78 11233 90 8817 2426 78.42 11243 91 8025 2390 77.05 10415 92 8276 2445 77.19 10721 93 7643 2298 76.88 9941 94 7617 2285 76.92 9902 95 7710 2176 77.99 9886 96 7299 2190 76.92 9489 97 7290 2267 76.28 9557 98 7435 2107 77.92 9542 99 7013 2013 77.70 9026 100 6993 2054 77.30 9047 101 6476 1961 76.76 8437 102 6516 1924 77.20 8440 103 6566 1859 77.93 8425 104 6334 1864 77.26 8198 105 6222 1822 77.35 8044 106 6363 1811 77.84 8174 107 5968 1760 77.23 7728 108 5826 1706 77.35 7532 109 5602 1704 76.68 7306 110 5500 1694 76.45 7194 111 5567 1620 77.46 7187 112 5469 1602 77.34 7071 113 5378 1638 76.65 7016 114 5270 1656 76.09 6926 115 5082 1511 77.08 6593 116 4976 1550 76.25 6526 117 4799 1523 75.91 6322 118 4646 1465 76.03 6111 119 4571 1451 75.91 6022 120 4543 1404 76.39 5947 121 4372 1392 75.85 5764 122 4325 1373 75.90 5698 123 4393 1309 77.04 5702 124 4354 1300 77.01 5654 125 4171 1237 77.13 5408 126 4061 1250 76.46 5311 127 3937 1298 75.21 5235 128 3845 1157 76.87 5002 129 3852 1192 76.37 5044 130 3955 1246 76.04 5201 131 3850 1221 75.92 5071 132 3631 1118 76.46 4749 133 3538 1092 76.41 4630 134 3364 1061 76.02 4425 135 3464 1098 75.93 4562 136 3406 1072 76.06 4478 137 3244 981 76.78 4225 138 3224 1080 74.91 4304 139 3080 1020 75.12 4100 140 3091 927 76.93 4018 141 3090 973 76.05 4063 142 2870 970 74.74 3840 143 2950 896 76.70 3846 144 2883 861 77.00 3744 145 2128 451 82.51 2579 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 12438 278070 4.28 290508 2 11075 186355 5.61 197430 3 8868 170720 4.94 179588 4 6038 165530 3.52 171568 5 8602 163342 5.00 171944 6 11662 158237 6.86 169899 7 5040 159706 3.06 164746 8 4759 154358 2.99 159117 9 3930 150963 2.54 154893 10 4107 150293 2.66 154400 11 5028 148985 3.26 154013 12 3292 158324 2.04 161616 13 3399 139787 2.37 143186 14 2929 138075 2.08 141004 15 2945 134364 2.14 137309 16 2503 136557 1.80 139060 17 2451 129095 1.86 131546 18 2254 129478 1.71 131732 19 2139 127430 1.65 129569 20 1861 127292 1.44 129153 21 1843 123219 1.47 125062 22 1654 121011 1.35 122665 23 1583 118643 1.32 120226 24 1518 117277 1.28 118795 25 1315 114288 1.14 115603 26 1363 116285 1.16 117648 27 1174 109462 1.06 110636 28 1149 106698 1.07 107847 29 1008 107556 0.93 108564 30 1072 104538 1.02 105610 31 933 101044 0.91 101977 32 967 101635 0.94 102602 33 845 97637 0.86 98482 34 950 97162 0.97 98112 35 732 95706 0.76 96438 36 903 96372 0.93 97275 37 658 90539 0.72 91197 38 806 90550 0.88 91356 39 647 87511 0.73 88158 40 759 85626 0.88 86385 41 652 82853 0.78 83505 42 643 83209 0.77 83852 43 682 80130 0.84 80812 44 608 79804 0.76 80412 45 578 76782 0.75 77360 46 573 76091 0.75 76664 47 589 74809 0.78 75398 48 493 74076 0.66 74569 49 580 70410 0.82 70990 50 517 69937 0.73 70454 51 519 66750 0.77 67269 52 525 66678 0.78 67203 53 542 65463 0.82 66005 54 405 63809 0.63 64214 55 541 62262 0.86 62803 56 486 61642 0.78 62128 57 518 58202 0.88 58720 58 445 58394 0.76 58839 59 520 56306 0.92 56826 60 435 56751 0.76 57186 61 485 54940 0.88 55425 62 432 53655 0.80 54087 63 456 53237 0.85 53693 64 486 53172 0.91 53658 65 452 50487 0.89 50939 66 420 49525 0.84 49945 67 425 48489 0.87 48914 68 407 48981 0.82 49388 69 373 46505 0.80 46878 70 385 46307 0.82 46692 71 403 45464 0.88 45867 72 409 45111 0.90 45520 73 396 43109 0.91 43505 74 381 42867 0.88 43248 75 319 42063 0.75 42382 76 393 41641 0.93 42034 77 342 39444 0.86 39786 78 380 39533 0.95 39913 79 359 38504 0.92 38863 80 405 38745 1.03 39150 81 305 36712 0.82 37017 82 406 36761 1.09 37167 83 309 35411 0.87 35720 84 361 35185 1.02 35546 85 308 34560 0.88 34868 86 308 33707 0.91 34015 87 311 33013 0.93 33324 88 302 33260 0.90 33562 89 284 31167 0.90 31451 90 317 31224 1.01 31541 91 287 31589 0.90 31876 92 281 30433 0.91 30714 93 260 29534 0.87 29794 94 271 28913 0.93 29184 95 304 28531 1.05 28835 96 236 28854 0.81 29090 97 309 27053 1.13 27362 98 253 26959 0.93 27212 99 232 26902 0.86 27134 100 219 26707 0.81 26926 101 250 25604 0.97 25854 102 203 25004 0.81 25207 103 238 24467 0.96 24705 104 203 24901 0.81 25104 105 244 23566 1.02 23810 106 213 23097 0.91 23310 107 219 23011 0.94 23230 108 232 22482 1.02 22714 109 215 21976 0.97 22191 110 186 21477 0.86 21663 111 188 21055 0.88 21243 112 201 21075 0.94 21276 113 189 20206 0.93 20395 114 219 20309 1.07 20528 115 188 19684 0.95 19872 116 210 19753 1.05 19963 117 151 19024 0.79 19175 118 187 18599 1.00 18786 119 187 18069 1.02 18256 120 185 18084 1.01 18269 121 163 17855 0.90 18018 122 189 17407 1.07 17596 123 144 17264 0.83 17408 124 159 17257 0.91 17416 125 155 16487 0.93 16642 126 181 16385 1.09 16566 127 148 15745 0.93 15893 128 153 15763 0.96 15916 129 151 14891 1.00 15042 130 131 15114 0.86 15245 131 157 14952 1.04 15109 132 140 14807 0.94 14947 133 150 14254 1.04 14404 134 153 13999 1.08 14152 135 151 13339 1.12 13490 136 112 13648 0.81 13760 137 121 13164 0.91 13285 138 119 12769 0.92 12888 139 150 12868 1.15 13018 140 122 12799 0.94 12921 141 124 12549 0.98 12673 142 108 12405 0.86 12513 143 114 11767 0.96 11881 144 124 11118 1.10 11242 145 99 5171 1.88 5270 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 48957 508122 8.79 557079 2 39795 559158 6.64 598953 3 38338 532751 6.71 571089 4 26388 502903 4.99 529291 5 24194 472263 4.87 496457 6 24054 459528 4.97 483582 7 22118 434077 4.85 456195 8 19126 431175 4.25 450301 9 18285 416436 4.21 434721 10 18627 410864 4.34 429491 11 19418 405743 4.57 425161 12 14883 395113 3.63 409996 13 14397 381892 3.63 396289 14 14222 375486 3.65 389708 15 13729 372902 3.55 386631 16 12848 360622 3.44 373470 17 11638 352306 3.20 363944 18 11600 344833 3.25 356433 19 10575 335913 3.05 346488 20 10480 333585 3.05 344065 21 9770 333384 2.85 343154 22 9591 324902 2.87 334493 23 8604 319518 2.62 328122 24 9082 310291 2.84 319373 25 7576 306923 2.41 314499 26 8111 300571 2.63 308682 27 7031 300241 2.29 307272 28 7303 294646 2.42 301949 29 6296 287474 2.14 293770 30 6829 283732 2.35 290561 31 5621 277471 1.99 283092 32 6321 276897 2.23 283218 33 5389 272962 1.94 278351 34 5959 265818 2.19 271777 35 4781 258853 1.81 263634 36 5505 251008 2.15 256513 37 4579 244249 1.84 248828 38 5237 243178 2.11 248415 39 4634 238901 1.90 243535 40 4834 231316 2.05 236150 41 4512 228116 1.94 232628 42 4913 223189 2.15 228102 43 4246 216705 1.92 220951 44 4719 210738 2.19 215457 45 4294 208535 2.02 212829 46 4494 202829 2.17 207323 47 4253 200382 2.08 204635 48 4327 197483 2.14 201810 49 4121 193394 2.09 197515 50 4198 187515 2.19 191713 51 4017 185528 2.12 189545 52 3943 184800 2.09 188743 53 3890 180281 2.11 184171 54 4097 174223 2.30 178320 55 3660 170999 2.10 174659 56 3729 168068 2.17 171797 57 3682 164531 2.19 168213 58 3741 160860 2.27 164601 59 3537 159784 2.17 163321 60 3641 157746 2.26 161387 61 3352 153376 2.14 156728 62 3604 148534 2.37 152138 63 3244 145648 2.18 148892 64 3626 144633 2.45 148259 65 3115 139570 2.18 142685 66 3535 138934 2.48 142469 67 3007 136810 2.15 139817 68 3405 133481 2.49 136886 69 3078 130948 2.30 134026 70 3319 128699 2.51 132018 71 2852 125233 2.23 128085 72 3273 124138 2.57 127411 73 2741 120039 2.23 122780 74 3230 118133 2.66 121363 75 2720 117456 2.26 120176 76 3107 114776 2.64 117883 77 2693 112628 2.34 115321 78 2991 110111 2.64 113102 79 2569 108814 2.31 111383 80 2862 106877 2.61 109739 81 2556 104627 2.38 107183 82 2708 101646 2.60 104354 83 2451 100836 2.37 103287 84 2728 99191 2.68 101919 85 2374 97227 2.38 99601 86 2571 95540 2.62 98111 87 2385 94450 2.46 96835 88 2460 91549 2.62 94009 89 2389 90284 2.58 92673 90 2399 88964 2.63 91363 91 2271 86928 2.55 89199 92 2290 86086 2.59 88376 93 2166 84665 2.49 86831 94 2239 82439 2.64 84678 95 2142 81623 2.56 83765 96 2138 79336 2.62 81474 97 2041 78264 2.54 80305 98 2050 77432 2.58 79482 99 1984 75746 2.55 77730 100 2005 74070 2.64 76075 101 1900 73360 2.52 75260 102 2059 72299 2.77 74358 103 1769 70697 2.44 72466 104 1906 69992 2.65 71898 105 1778 68040 2.55 69818 106 1851 66825 2.70 68676 107 1734 65783 2.57 67517 108 1783 64024 2.71 65807 109 1603 63523 2.46 65126 110 1693 62161 2.65 63854 111 1534 61286 2.44 62820 112 1655 60247 2.67 61902 113 1489 59425 2.44 60914 114 1635 58080 2.74 59715 115 1397 56742 2.40 58139 116 1612 55822 2.81 57434 117 1396 55029 2.47 56425 118 1459 54089 2.63 55548 119 1375 53234 2.52 54609 120 1461 53475 2.66 54936 121 1229 51499 2.33 52728 122 1379 50555 2.66 51934 123 1220 49484 2.41 50704 124 1371 48586 2.74 49957 125 1112 48535 2.24 49647 126 1294 47480 2.65 48774 127 1102 46299 2.32 47401 128 1189 45708 2.54 46897 129 1156 45601 2.47 46757 130 1139 44107 2.52 45246 131 1064 42899 2.42 43963 132 1149 42426 2.64 43575 133 1019 42007 2.37 43026 134 1106 41680 2.58 42786 135 1015 40540 2.44 41555 136 1050 39270 2.60 40320 137 967 39386 2.40 40353 138 1011 38382 2.57 39393 139 926 38000 2.38 38926 140 1001 37094 2.63 38095 141 877 36636 2.34 37513 142 896 35781 2.44 36677 143 797 35310 2.21 36107 144 776 32922 2.30 33698 145 570 15761 3.49 16331