CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 145749 88476 62.23 234225 2 142927 80987 63.83 223914 3 162735 82467 66.37 245202 4 176289 79980 68.79 256269 5 175830 77716 69.35 253546 6 193847 73033 72.63 266880 7 207301 72949 73.97 280250 8 200823 71422 73.77 272245 9 203873 72380 73.80 276253 10 199031 71369 73.61 270400 11 201107 71537 73.76 272644 12 202095 70630 74.10 272725 13 204022 72102 73.89 276124 14 207090 71160 74.43 278250 15 217241 73312 74.77 290553 16 216401 71001 75.30 287402 17 218879 72223 75.19 291102 18 223964 73474 75.30 297438 19 219339 72838 75.07 292177 20 207907 69303 75.00 277210 21 218284 71691 75.28 289975 22 216989 70712 75.42 287701 23 216219 71253 75.21 287472 24 215970 71200 75.21 287170 25 219658 73539 74.92 293197 26 213045 69720 75.34 282765 27 212022 70196 75.13 282218 28 227513 74127 75.43 301640 29 218135 69970 75.71 288105 30 220315 70396 75.78 290711 31 217797 69958 75.69 287755 32 224449 71128 75.94 295577 33 226254 72541 75.72 298795 34 220439 70315 75.82 290754 35 221233 70838 75.75 292071 36 221013 69743 76.01 290756 37 217762 69865 75.71 287627 38 222767 71707 75.65 294474 39 221722 68873 76.30 290595 40 215070 68185 75.93 283255 41 221998 68918 76.31 290916 42 215442 68474 75.88 283916 43 219713 70904 75.60 290617 44 213979 67954 75.90 281933 45 215351 67708 76.08 283059 46 215285 69496 75.60 284781 47 218014 67063 76.48 285077 48 216459 67253 76.30 283712 49 214896 67874 76.00 282770 50 209701 67490 75.65 277191 51 213213 66990 76.09 280203 52 210043 66736 75.89 276779 53 212931 67429 75.95 280360 54 210675 67214 75.81 277889 55 211216 66527 76.05 277743 56 209156 65457 76.16 274613 57 210672 66355 76.05 277027 58 212317 66960 76.02 279277 59 205654 65709 75.79 271363 60 206051 65894 75.77 271945 61 204062 64741 75.92 268803 62 200508 64293 75.72 264801 63 204229 64180 76.09 268409 64 195455 63176 75.57 258631 65 194486 63225 75.47 257711 66 194085 64575 75.03 258660 67 190648 61692 75.55 252340 68 194919 61871 75.91 256790 69 194629 61947 75.86 256576 70 185835 59682 75.69 245517 71 183729 58897 75.73 242626 72 184698 59664 75.58 244362 73 182807 60581 75.11 243388 74 184887 58943 75.83 243830 75 182329 58482 75.71 240811 76 179910 57937 75.64 237847 77 181806 57127 76.09 238933 78 175497 56788 75.55 232285 79 172403 56773 75.23 229176 80 171696 56206 75.34 227902 81 165819 54580 75.24 220399 82 163889 53438 75.41 217327 83 162792 53831 75.15 216623 84 162445 53503 75.22 215948 85 160148 52247 75.40 212395 86 160925 52474 75.41 213399 87 157134 51460 75.33 208594 88 155841 51085 75.31 206926 89 157099 51707 75.24 208806 90 151969 50598 75.02 202567 91 149415 49629 75.07 199044 92 147085 48968 75.02 196053 93 142692 48433 74.66 191125 94 143482 47663 75.06 191145 95 141737 47208 75.01 188945 96 139602 46569 74.99 186171 97 136788 46146 74.77 182934 98 135827 45432 74.94 181259 99 134151 44755 74.98 178906 100 130485 44092 74.74 174577 101 129529 43137 75.02 172666 102 129063 43042 74.99 172105 103 128846 43643 74.70 172489 104 125619 41840 75.01 167459 105 124673 41659 74.95 166332 106 123818 41429 74.93 165247 107 120686 40712 74.78 161398 108 118667 40439 74.58 159106 109 114121 39925 74.08 154046 110 112179 38835 74.28 151014 111 112539 38729 74.40 151268 112 111091 37809 74.61 148900 113 106498 37436 73.99 143934 114 105930 37080 74.07 143010 115 104477 36063 74.34 140540 116 103453 35698 74.35 139151 117 101173 35463 74.05 136636 118 97850 35052 73.63 132902 119 96483 33657 74.14 130140 120 94526 33996 73.55 128522 121 92625 33024 73.72 125649 122 91968 32366 73.97 124334 123 91371 32297 73.88 123668 124 90012 31762 73.92 121774 125 87175 31319 73.57 118494 126 85621 30657 73.63 116278 127 82982 29990 73.45 112972 128 80226 29605 73.04 109831 129 80373 29563 73.11 109936 130 79636 29340 73.08 108976 131 78848 28581 73.40 107429 132 76997 27724 73.53 104721 133 75403 27976 72.94 103379 134 73641 27008 73.17 100649 135 71569 26484 72.99 98053 136 69865 26386 72.59 96251 137 69498 25835 72.90 95333 138 67666 25546 72.59 93212 139 67676 25440 72.68 93116 140 66042 25215 72.37 91257 141 64729 25151 72.02 89880 142 63834 25134 71.75 88968 143 62844 24315 72.10 87159 144 62357 22811 73.22 85168 145 51845 10901 82.63 62746 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 29186 1012246 2.80 1041432 2 25191 670483 3.62 695674 3 19950 640646 3.02 660596 4 14079 653579 2.11 667658 5 15973 651807 2.39 667780 6 19386 653812 2.88 673198 7 10846 660295 1.62 671141 8 10109 671778 1.48 681887 9 9629 656339 1.45 665968 10 8661 675199 1.27 683860 11 10130 695909 1.43 706039 12 7988 704433 1.12 712421 13 8353 684282 1.21 692635 14 7362 681226 1.07 688588 15 7966 702206 1.12 710172 16 6905 706399 0.97 713304 17 6565 678692 0.96 685257 18 6250 704475 0.88 710725 19 6045 706092 0.85 712137 20 5749 715772 0.80 721521 21 5825 696266 0.83 702091 22 5390 699831 0.76 705221 23 5178 705829 0.73 711007 24 5108 704143 0.72 709251 25 4970 702393 0.70 707363 26 5046 735033 0.68 740079 27 4592 692839 0.66 697431 28 4698 699786 0.67 704484 29 4533 711567 0.63 716100 30 4756 704492 0.67 709248 31 4215 698659 0.60 702874 32 4926 712869 0.69 717795 33 4261 707553 0.60 711814 34 4807 706059 0.68 710866 35 4307 701365 0.61 705672 36 4695 722605 0.65 727300 37 4398 710237 0.62 714635 38 4676 709146 0.66 713822 39 4198 696657 0.60 700855 40 4641 698484 0.66 703125 41 4347 702143 0.62 706490 42 4527 710004 0.63 714531 43 4490 719474 0.62 723964 44 4689 711774 0.65 716463 45 4587 709199 0.64 713786 46 4593 707208 0.65 711801 47 4572 694664 0.65 699236 48 4626 700213 0.66 704839 49 4827 701520 0.68 706347 50 4824 702530 0.68 707354 51 4946 688405 0.71 693351 52 4827 696337 0.69 701164 53 5283 700698 0.75 705981 54 5093 681662 0.74 686755 55 5363 677434 0.79 682797 56 5102 683185 0.74 688287 57 5598 664971 0.83 670569 58 5791 675057 0.85 680848 59 5592 666501 0.83 672093 60 5192 663425 0.78 668617 61 5568 656812 0.84 662380 62 5596 653371 0.85 658967 63 5603 651679 0.85 657282 64 5625 649634 0.86 655259 65 5678 645240 0.87 650918 66 5879 636753 0.91 642632 67 5758 639050 0.89 644808 68 5870 641473 0.91 647343 69 5742 627037 0.91 632779 70 6105 627073 0.96 633178 71 5973 616843 0.96 622816 72 6415 614020 1.03 620435 73 6167 604188 1.01 610355 74 6515 614418 1.05 620933 75 6852 609979 1.11 616831 76 6625 598364 1.10 604989 77 6309 587193 1.06 593502 78 6687 581559 1.14 588246 79 6323 576174 1.09 582497 80 6646 577440 1.14 584086 81 6517 560250 1.15 566767 82 6403 559466 1.13 565869 83 6711 553166 1.20 559877 84 6676 546810 1.21 553486 85 6672 538719 1.22 545391 86 6612 533268 1.22 539880 87 6656 526512 1.25 533168 88 6437 522354 1.22 528791 89 6506 508218 1.26 514724 90 6643 510725 1.28 517368 91 6834 506451 1.33 513285 92 6503 496934 1.29 503437 93 6558 485772 1.33 492330 94 6754 480864 1.39 487618 95 6481 476524 1.34 483005 96 6642 479106 1.37 485748 97 6685 466809 1.41 473494 98 6553 463895 1.39 470448 99 6715 462245 1.43 468960 100 6576 458095 1.42 464671 101 6756 439905 1.51 446661 102 6677 439104 1.50 445781 103 6510 427517 1.50 434027 104 6537 431032 1.49 437569 105 6433 419011 1.51 425444 106 6386 414341 1.52 420727 107 6281 409432 1.51 415713 108 6234 402974 1.52 409208 109 6269 391791 1.57 398060 110 6251 387336 1.59 393587 111 6337 377899 1.65 384236 112 6293 379314 1.63 385607 113 6351 364988 1.71 371339 114 6376 363412 1.72 369788 115 6002 360397 1.64 366399 116 6228 358687 1.71 364915 117 6089 347201 1.72 353290 118 6019 340111 1.74 346130 119 5952 336186 1.74 342138 120 6217 335604 1.82 341821 121 6030 328943 1.80 334973 122 6015 324671 1.82 330686 123 5907 313587 1.85 319494 124 6104 312038 1.92 318142 125 5991 306241 1.92 312232 126 6056 300934 1.97 306990 127 5584 294274 1.86 299858 128 5474 289006 1.86 294480 129 5375 280106 1.88 285481 130 5187 278234 1.83 283421 131 5382 275139 1.92 280521 132 5250 269404 1.91 274654 133 5170 260364 1.95 265534 134 5325 254409 2.05 259734 135 5185 248343 2.05 253528 136 5218 251499 2.03 256717 137 5053 241300 2.05 246353 138 5118 239339 2.09 244457 139 5103 233454 2.14 238557 140 5252 232608 2.21 237860 141 5352 229838 2.28 235190 142 5910 226223 2.55 232133 143 6059 219991 2.68 226050 144 5914 209492 2.75 215406 145 4520 106311 4.08 110831 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 114560 1860494 5.80 1975054 2 102559 2105816 4.64 2208375 3 93687 2093227 4.28 2186914 4 72044 2019082 3.45 2091126 5 63353 1945481 3.15 2008834 6 58642 1932886 2.94 1991528 7 51980 1896071 2.67 1948051 8 46649 1889672 2.41 1936321 9 45077 1858688 2.37 1903765 10 41402 1868728 2.17 1910130 11 42616 1901860 2.19 1944476 12 35883 1853260 1.90 1889143 13 34696 1831275 1.86 1865971 14 34951 1848210 1.86 1883161 15 34545 1838362 1.84 1872907 16 32263 1832833 1.73 1865096 17 30796 1808522 1.67 1839318 18 29967 1819110 1.62 1849077 19 28158 1801925 1.54 1830083 20 28360 1801949 1.55 1830309 21 26447 1829624 1.42 1856071 22 27923 1821655 1.51 1849578 23 24919 1824805 1.35 1849724 24 26732 1811892 1.45 1838624 25 23635 1816582 1.28 1840217 26 25421 1827666 1.37 1853087 27 22972 1856737 1.22 1879709 28 24817 1848045 1.33 1872862 29 21664 1847405 1.16 1869069 30 24093 1861640 1.28 1885733 31 20900 1847961 1.12 1868861 32 23056 1882886 1.21 1905942 33 20434 1881662 1.07 1902096 34 22743 1868482 1.20 1891225 35 20318 1876041 1.07 1896359 36 22256 1854834 1.19 1877090 37 19802 1846754 1.06 1866556 38 22123 1856279 1.18 1878402 39 20674 1874473 1.09 1895147 40 21900 1860461 1.16 1882361 41 21029 1861318 1.12 1882347 42 22413 1866537 1.19 1888950 43 21216 1854796 1.13 1876012 44 22405 1862329 1.19 1884734 45 21880 1853228 1.17 1875108 46 22411 1853790 1.19 1876201 47 22162 1852924 1.18 1875086 48 22428 1860066 1.19 1882494 49 22759 1851037 1.21 1873796 50 22519 1844860 1.21 1867379 51 22921 1837319 1.23 1860240 52 22868 1843130 1.23 1865998 53 23323 1840453 1.25 1863776 54 23171 1828565 1.25 1851736 55 23159 1826876 1.25 1850035 56 23235 1815070 1.26 1838305 57 23765 1808680 1.30 1832445 58 23744 1790798 1.31 1814542 59 24307 1812452 1.32 1836759 60 24453 1817480 1.33 1841933 61 24809 1790174 1.37 1814983 62 26255 1770441 1.46 1796696 63 25025 1770144 1.39 1795169 64 25408 1764652 1.42 1790060 65 24181 1747179 1.37 1771360 66 26555 1750522 1.49 1777077 67 24765 1727245 1.41 1752010 68 26784 1721869 1.53 1748653 69 25738 1715426 1.48 1741164 70 27429 1700724 1.59 1728153 71 25269 1679125 1.48 1704394 72 27205 1657645 1.61 1684850 73 25656 1641917 1.54 1667573 74 27790 1630961 1.68 1658751 75 26322 1625753 1.59 1652075 76 28546 1610526 1.74 1639072 77 26504 1587664 1.64 1614168 78 28374 1581126 1.76 1609500 79 26871 1573593 1.68 1600464 80 28208 1558151 1.78 1586359 81 26883 1535447 1.72 1562330 82 28189 1506455 1.84 1534644 83 26960 1501464 1.76 1528424 84 28531 1492754 1.88 1521285 85 26891 1472564 1.79 1499455 86 28191 1463743 1.89 1491934 87 27570 1452228 1.86 1479798 88 27586 1413916 1.91 1441502 89 27149 1394511 1.91 1421660 90 27093 1392932 1.91 1420025 91 26535 1371664 1.90 1398199 92 27653 1356343 2.00 1383996 93 27071 1342378 1.98 1369449 94 26990 1314091 2.01 1341081 95 26821 1307257 2.01 1334078 96 26624 1286347 2.03 1312971 97 26423 1267355 2.04 1293778 98 26818 1253568 2.09 1280386 99 26552 1243795 2.09 1270347 100 26407 1219842 2.12 1246249 101 26257 1206588 2.13 1232845 102 26386 1189366 2.17 1215752 103 25519 1164250 2.14 1189769 104 25864 1151076 2.20 1176940 105 25323 1130123 2.19 1155446 106 25226 1117049 2.21 1142275 107 24461 1100238 2.17 1124699 108 24943 1085767 2.25 1110710 109 24064 1079003 2.18 1103067 110 24715 1053099 2.29 1077814 111 23976 1039903 2.25 1063879 112 24466 1026323 2.33 1050789 113 23596 1004454 2.30 1028050 114 24285 996011 2.38 1020296 115 23101 975090 2.31 998191 116 23949 962809 2.43 986758 117 22808 949117 2.35 971925 118 23427 931264 2.45 954691 119 22905 921789 2.42 944694 120 23170 911522 2.48 934692 121 22212 893275 2.43 915487 122 22379 873712 2.50 896091 123 21673 861236 2.45 882909 124 21608 844905 2.49 866513 125 20754 831060 2.44 851814 126 21413 817678 2.55 839091 127 20478 806800 2.48 827278 128 20707 795231 2.54 815938 129 20464 785079 2.54 805543 130 20433 769927 2.59 790360 131 19976 754237 2.58 774213 132 20305 747622 2.64 767927 133 19505 738338 2.57 757843 134 19481 724842 2.62 744323 135 19357 707015 2.66 726372 136 19268 695520 2.70 714788 137 19127 684866 2.72 703993 138 19265 671696 2.79 690961 139 19551 661869 2.87 681420 140 19558 651515 2.91 671073 141 19952 640306 3.02 660258 142 20740 629865 3.19 650605 143 20674 615163 3.25 635837 144 19579 585193 3.24 604772 145 14368 293096 4.67 307464 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 34561 28741 54.60 63302 2 33996 25552 57.09 59548 3 38899 24399 61.45 63298 4 39893 22574 63.86 62467 5 39021 20832 65.19 59853 6 43305 19531 68.92 62836 7 46806 18628 71.53 65434 8 44302 17864 71.26 62166 9 42063 17754 70.32 59817 10 41771 17543 70.42 59314 11 41333 16782 71.12 58115 12 39548 16899 70.06 56447 13 39767 16077 71.21 55844 14 40025 15308 72.33 55333 15 40499 15348 72.52 55847 16 38756 14812 72.35 53568 17 38966 14779 72.50 53745 18 39824 14946 72.71 54770 19 37682 14568 72.12 52250 20 35355 13395 72.52 48750 21 36764 13543 73.08 50307 22 36432 13021 73.67 49453 23 35789 12805 73.65 48594 24 34074 12296 73.48 46370 25 34175 12236 73.64 46411 26 33072 11828 73.66 44900 27 33236 11599 74.13 44835 28 32844 11311 74.38 44155 29 32716 11384 74.19 44100 30 32242 11096 74.40 43338 31 30891 10533 74.57 41424 32 30120 10230 74.65 40350 33 29643 10359 74.10 40002 34 29285 9989 74.57 39274 35 28288 9759 74.35 38047 36 27549 9489 74.38 37038 37 27226 9266 74.61 36492 38 26767 8988 74.86 35755 39 26321 8798 74.95 35119 40 25462 8710 74.51 34172 41 26516 8676 75.35 35192 42 24258 8341 74.41 32599 43 24357 8158 74.91 32515 44 23960 7919 75.16 31879 45 23053 7638 75.11 30691 46 22728 7780 74.50 30508 47 22933 7296 75.86 30229 48 21916 7209 75.25 29125 49 21690 7170 75.16 28860 50 20700 6932 74.91 27632 51 20342 6962 74.50 27304 52 20166 6706 75.04 26872 53 20127 6780 74.80 26907 54 19497 6443 75.16 25940 55 18608 6372 74.49 24980 56 18505 6220 74.84 24725 57 18677 6286 74.82 24963 58 18226 6203 74.61 24429 59 17837 5845 75.32 23682 60 17335 5882 74.67 23217 61 17160 5680 75.13 22840 62 16830 5573 75.12 22403 63 16569 5487 75.12 22056 64 15774 5255 75.01 21029 65 15328 5069 75.15 20397 66 15304 5241 74.49 20545 67 14953 4990 74.98 19943 68 14800 4846 75.33 19646 69 14558 4798 75.21 19356 70 14018 4689 74.93 18707 71 14104 4595 75.43 18699 72 13420 4570 74.60 17990 73 13662 4578 74.90 18240 74 13052 4350 75.00 17402 75 13210 4329 75.32 17539 76 12711 4091 75.65 16802 77 12796 4088 75.79 16884 78 12704 4181 75.24 16885 79 12029 3985 75.12 16014 80 11906 3787 75.87 15693 81 11338 3816 74.82 15154 82 11049 3719 74.82 14768 83 10933 3732 74.55 14665 84 11160 3519 76.03 14679 85 10871 3533 75.47 14404 86 10781 3482 75.59 14263 87 10580 3378 75.80 13958 88 10321 3397 75.24 13718 89 10280 3440 74.93 13720 90 10251 3134 76.59 13385 91 9788 3115 75.86 12903 92 9671 3096 75.75 12767 93 9521 3055 75.71 12576 94 9243 2919 76.00 12162 95 8851 2932 75.12 11783 96 8854 2818 75.86 11672 97 8745 2859 75.36 11604 98 8598 2843 75.15 11441 99 8554 2674 76.18 11228 100 8450 2728 75.59 11178 101 7923 2602 75.28 10525 102 8161 2637 75.58 10798 103 7910 2535 75.73 10445 104 7678 2494 75.48 10172 105 7791 2421 76.29 10212 106 7623 2492 75.36 10115 107 7399 2421 75.35 9820 108 7106 2237 76.06 9343 109 6974 2389 74.48 9363 110 6753 2280 74.76 9033 111 6732 2347 74.15 9079 112 6730 2131 75.95 8861 113 6370 2103 75.18 8473 114 6374 2121 75.03 8495 115 6298 2042 75.52 8340 116 6232 2115 74.66 8347 117 6068 1939 75.78 8007 118 5885 1954 75.07 7839 119 5898 1930 75.34 7828 120 5683 1871 75.23 7554 121 5796 1953 74.80 7749 122 5540 1802 75.46 7342 123 5433 1681 76.37 7114 124 5325 1829 74.43 7154 125 5203 1688 75.50 6891 126 5087 1674 75.24 6761 127 4987 1718 74.38 6705 128 5112 1632 75.80 6744 129 4955 1619 75.37 6574 130 4820 1661 74.37 6481 131 4840 1547 75.78 6387 132 4589 1589 74.28 6178 133 4456 1583 73.79 6039 134 4564 1504 75.21 6068 135 4445 1457 75.31 5902 136 4257 1498 73.97 5755 137 4128 1446 74.06 5574 138 4041 1400 74.27 5441 139 4009 1419 73.86 5428 140 4045 1320 75.40 5365 141 3939 1338 74.64 5277 142 3866 1329 74.42 5195 143 3821 1305 74.54 5126 144 3615 1167 75.60 4782 145 2870 573 83.36 3443 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14307 273059 4.98 287366 2 12891 180728 6.66 193619 3 10924 165459 6.19 176383 4 6934 161465 4.12 168399 5 9493 158180 5.66 167673 6 11678 154849 7.01 166527 7 5350 154688 3.34 160038 8 4822 152390 3.07 157212 9 4517 148187 2.96 152704 10 4315 149526 2.80 153841 11 4702 149455 3.05 154157 12 3423 153650 2.18 157073 13 3540 142178 2.43 145718 14 3127 140669 2.17 143796 15 3132 138447 2.21 141579 16 2758 138370 1.95 141128 17 2461 133435 1.81 135896 18 2380 133141 1.76 135521 19 2180 131935 1.63 134115 20 1950 131980 1.46 133930 21 1890 128759 1.45 130649 22 1706 124938 1.35 126644 23 1624 126069 1.27 127693 24 1566 123355 1.25 124921 25 1351 120266 1.11 121617 26 1313 123125 1.06 124438 27 1190 116190 1.01 117380 28 1117 115130 0.96 116247 29 1071 114970 0.92 116041 30 971 112475 0.86 113446 31 881 109617 0.80 110498 32 900 108843 0.82 109743 33 768 106230 0.72 106998 34 775 104929 0.73 105704 35 730 103325 0.70 104055 36 800 104403 0.76 105203 37 628 99380 0.63 100008 38 672 99647 0.67 100319 39 638 95640 0.66 96278 40 631 94538 0.66 95169 41 562 91744 0.61 92306 42 564 92408 0.61 92972 43 590 89967 0.65 90557 44 521 88113 0.59 88634 45 514 85433 0.60 85947 46 530 85639 0.62 86169 47 511 83629 0.61 84140 48 514 82732 0.62 83246 49 485 79449 0.61 79934 50 493 79640 0.62 80133 51 482 76303 0.63 76785 52 467 76461 0.61 76928 53 490 74370 0.65 74860 54 497 73036 0.68 73533 55 532 70767 0.75 71299 56 466 71149 0.65 71615 57 490 67035 0.73 67525 58 453 67004 0.67 67457 59 470 65855 0.71 66325 60 468 65541 0.71 66009 61 426 63952 0.66 64378 62 436 63244 0.68 63680 63 392 61543 0.63 61935 64 390 61377 0.63 61767 65 400 59420 0.67 59820 66 399 57574 0.69 57973 67 431 57070 0.75 57501 68 441 56656 0.77 57097 69 352 54522 0.64 54874 70 362 54467 0.66 54829 71 339 53895 0.63 54234 72 425 53376 0.79 53801 73 385 51935 0.74 52320 74 379 50761 0.74 51140 75 328 50222 0.65 50550 76 403 49391 0.81 49794 77 358 47978 0.74 48336 78 351 47299 0.74 47650 79 346 46613 0.74 46959 80 347 46489 0.74 46836 81 321 44570 0.72 44891 82 305 44147 0.69 44452 83 302 42892 0.70 43194 84 328 42762 0.76 43090 85 301 41214 0.73 41515 86 295 40911 0.72 41206 87 291 40527 0.71 40818 88 312 39131 0.79 39443 89 273 38385 0.71 38658 90 293 38462 0.76 38755 91 245 38004 0.64 38249 92 290 36948 0.78 37238 93 257 36086 0.71 36343 94 263 35231 0.74 35494 95 271 34951 0.77 35222 96 256 34812 0.73 35068 97 264 33545 0.78 33809 98 240 33322 0.72 33562 99 232 32820 0.70 33052 100 251 32672 0.76 32923 101 241 31377 0.76 31618 102 247 30928 0.79 31175 103 239 30238 0.78 30477 104 214 30787 0.69 31001 105 227 29164 0.77 29391 106 217 29296 0.74 29513 107 214 28182 0.75 28396 108 215 28146 0.76 28361 109 195 27112 0.71 27307 110 201 26860 0.74 27061 111 219 26799 0.81 27018 112 194 26333 0.73 26527 113 203 25004 0.81 25207 114 175 25230 0.69 25405 115 203 24551 0.82 24754 116 207 24364 0.84 24571 117 178 23764 0.74 23942 118 190 23528 0.80 23718 119 186 23199 0.80 23385 120 181 23068 0.78 23249 121 172 22168 0.77 22340 122 177 22227 0.79 22404 123 151 21441 0.70 21592 124 159 22090 0.71 22249 125 155 20581 0.75 20736 126 163 20669 0.78 20832 127 161 20267 0.79 20428 128 158 20012 0.78 20170 129 162 19470 0.83 19632 130 139 19192 0.72 19331 131 141 18921 0.74 19062 132 161 18815 0.85 18976 133 140 18154 0.77 18294 134 144 17756 0.80 17900 135 147 17343 0.84 17490 136 148 17588 0.83 17736 137 151 16973 0.88 17124 138 120 16585 0.72 16705 139 140 16706 0.83 16846 140 136 16398 0.82 16534 141 150 16062 0.93 16212 142 116 15854 0.73 15970 143 129 15375 0.83 15504 144 126 14116 0.88 14242 145 65 6971 0.92 7036 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 55540 519893 9.65 575433 2 46087 576528 7.40 622615 3 42696 551181 7.19 593877 4 31004 522125 5.61 553129 5 27521 492529 5.29 520050 6 26915 484036 5.27 510951 7 24162 460171 4.99 484333 8 20728 456469 4.34 477197 9 19635 444260 4.23 463895 10 19329 440011 4.21 459340 11 19871 436220 4.36 456091 12 15417 427272 3.48 442689 13 14695 414735 3.42 429430 14 14103 411408 3.31 425511 15 13740 409715 3.24 423455 16 12776 395984 3.13 408760 17 11466 390115 2.86 401581 18 10906 384862 2.76 395768 19 10020 376767 2.59 386787 20 9764 372242 2.56 382006 21 8695 373532 2.27 382227 22 8470 364609 2.27 373079 23 7467 359496 2.03 366963 24 7571 351194 2.11 358765 25 6640 348263 1.87 354903 26 6705 340273 1.93 346978 27 5829 341950 1.68 347779 28 5809 336157 1.70 341966 29 5075 327231 1.53 332306 30 5139 325507 1.55 330646 31 4404 318711 1.36 323115 32 4660 318520 1.44 323180 33 3960 315054 1.24 319014 34 4122 308543 1.32 312665 35 3665 300350 1.21 304015 36 3708 292130 1.25 295838 37 3156 284680 1.10 287836 38 3558 284523 1.24 288081 39 3160 279124 1.12 282284 40 3359 271689 1.22 275048 41 3089 267882 1.14 270971 42 3211 262626 1.21 265837 43 3019 255432 1.17 258451 44 3113 250692 1.23 253805 45 3026 248839 1.20 251865 46 2922 241824 1.19 244746 47 2992 239389 1.23 242381 48 2899 235907 1.21 238806 49 2833 231532 1.21 234365 50 2816 225804 1.23 228620 51 2910 221985 1.29 224895 52 2643 221058 1.18 223701 53 2691 217524 1.22 220215 54 2706 211733 1.26 214439 55 2610 206364 1.25 208974 56 2546 204699 1.23 207245 57 2580 202125 1.26 204705 58 2496 196483 1.25 198979 59 2429 195478 1.23 197907 60 2470 191816 1.27 194286 61 2314 188511 1.21 190825 62 2447 183280 1.32 185727 63 2293 179946 1.26 182239 64 2396 179767 1.32 182163 65 2186 175563 1.23 177749 66 2479 174924 1.40 177403 67 2093 171596 1.21 173689 68 2309 167408 1.36 169717 69 2220 164199 1.33 166419 70 2367 162339 1.44 164706 71 1978 157881 1.24 159859 72 2260 156481 1.42 158741 73 1863 151950 1.21 153813 74 2283 150010 1.50 152293 75 1889 148727 1.25 150616 76 2177 146125 1.47 148302 77 1826 143038 1.26 144864 78 2104 140251 1.48 142355 79 1777 139138 1.26 140915 80 1933 137976 1.38 139909 81 1827 134529 1.34 136356 82 1953 130726 1.47 132679 83 1662 130229 1.26 131891 84 1860 128316 1.43 130176 85 1700 125728 1.33 127428 86 1771 123940 1.41 125711 87 1678 123173 1.34 124851 88 1655 120378 1.36 122033 89 1646 117849 1.38 119495 90 1666 116103 1.41 117769 91 1583 114409 1.36 115992 92 1582 113652 1.37 115234 93 1618 111324 1.43 112942 94 1582 108634 1.44 110216 95 1510 107369 1.39 108879 96 1495 105102 1.40 106597 97 1484 103455 1.41 104939 98 1406 102080 1.36 103486 99 1389 101080 1.36 102469 100 1378 99205 1.37 100583 101 1390 96705 1.42 98095 102 1373 95620 1.42 96993 103 1275 93827 1.34 95102 104 1326 92369 1.42 93695 105 1295 90661 1.41 91956 106 1271 89358 1.40 90629 107 1246 88194 1.39 89440 108 1267 86517 1.44 87784 109 1247 85508 1.44 86755 110 1197 83791 1.41 84988 111 1176 82607 1.40 83783 112 1216 81177 1.48 82393 113 1090 80145 1.34 81235 114 1210 78244 1.52 79454 115 1025 76500 1.32 77525 116 1166 75461 1.52 76627 117 1016 74498 1.35 75514 118 1076 72999 1.45 74075 119 1012 72482 1.38 73494 120 1081 71207 1.50 72288 121 999 70405 1.40 71404 122 984 68589 1.41 69573 123 903 67706 1.32 68609 124 970 66133 1.45 67103 125 927 65706 1.39 66633 126 934 65302 1.41 66236 127 835 63773 1.29 64608 128 879 62431 1.39 63310 129 834 62131 1.32 62965 130 869 60617 1.41 61486 131 798 59684 1.32 60482 132 785 58782 1.32 59567 133 750 57799 1.28 58549 134 741 57140 1.28 57881 135 784 55531 1.39 56315 136 710 54636 1.28 55346 137 728 54158 1.33 54886 138 759 52986 1.41 53745 139 767 52707 1.43 53474 140 689 51492 1.32 52181 141 702 50626 1.37 51328 142 693 49642 1.38 50335 143 627 48753 1.27 49380 144 588 45775 1.27 46363 145 454 23078 1.93 23532