CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 174149 87427 66.58 261576 2 168508 80771 67.60 249279 3 192225 84350 69.50 276575 4 207605 82297 71.61 289902 5 209516 79467 72.50 288983 6 232300 77043 75.09 309343 7 246310 76194 76.37 322504 8 240870 74802 76.30 315672 9 242908 76295 76.10 319203 10 232818 74856 75.67 307674 11 239424 75743 75.97 315167 12 235877 74023 76.11 309900 13 239935 77167 75.66 317102 14 241411 74688 76.37 316099 15 253448 76383 76.84 329831 16 253246 75761 76.97 329007 17 254892 76325 76.96 331217 18 259824 77931 76.93 337755 19 253190 76569 76.78 329759 20 242018 72958 76.84 314976 21 254740 75840 77.06 330580 22 250861 75097 76.96 325958 23 249656 75726 76.73 325382 24 249315 74962 76.88 324277 25 251684 76366 76.72 328050 26 247689 73831 77.04 321520 27 245929 73627 76.96 319556 28 257579 77403 76.89 334982 29 249385 73796 77.17 323181 30 250792 75174 76.94 325966 31 248984 74554 76.96 323538 32 252103 74759 77.13 326862 33 253546 76603 76.80 330149 34 253241 74119 77.36 327360 35 249124 75003 76.86 324127 36 250389 73660 77.27 324049 37 249246 73619 77.20 322865 38 247882 74936 76.79 322818 39 247264 73123 77.18 320387 40 238795 71767 76.89 310562 41 242506 72710 76.93 315216 42 240263 71512 77.06 311775 43 243684 72921 76.97 316605 44 238581 71207 77.01 309788 45 239894 71511 77.04 311405 46 232554 70640 76.70 303194 47 236414 69037 77.40 305451 48 234865 68995 77.29 303860 49 233008 68995 77.15 302003 50 224755 67858 76.81 292613 51 229251 67651 77.21 296902 52 225501 66936 77.11 292437 53 225121 67152 77.02 292273 54 224065 65753 77.31 289818 55 219799 65732 76.98 285531 56 216426 64070 77.16 280496 57 217899 64193 77.24 282092 58 218226 64562 77.17 282788 59 211307 63353 76.93 274660 60 208257 62909 76.80 271166 61 204669 61036 77.03 265705 62 199639 59574 77.02 259213 63 202146 60363 77.01 262509 64 191879 58094 76.76 249973 65 187686 57957 76.41 245643 66 184362 58110 76.03 242472 67 182947 55345 76.77 238292 68 186590 55373 77.12 241963 69 182145 54775 76.88 236920 70 173172 52653 76.68 225825 71 169646 51751 76.63 221397 72 171593 51528 76.91 223121 73 167365 51675 76.41 219040 74 164936 50193 76.67 215129 75 162225 49071 76.78 211296 76 159867 48054 76.89 207921 77 159653 47292 77.15 206945 78 151745 46490 76.55 198235 79 147667 45452 76.46 193119 80 144633 44400 76.51 189033 81 138716 43192 76.26 181908 82 135216 41476 76.53 176692 83 133410 41115 76.44 174525 84 130682 40469 76.35 171151 85 128093 40152 76.13 168245 86 126393 39107 76.37 165500 87 121698 37894 76.26 159592 88 122047 37659 76.42 159706 89 119949 37077 76.39 157026 90 115106 36035 76.16 151141 91 112840 34348 76.66 147188 92 108918 33977 76.22 142895 93 104316 33166 75.88 137482 94 103326 32508 76.07 135834 95 102335 31781 76.30 134116 96 99272 31092 76.15 130364 97 95605 30398 75.88 126003 98 93911 29614 76.03 123525 99 91700 29289 75.79 120989 100 88596 27885 76.06 116481 101 86414 27060 76.15 113474 102 84208 26879 75.80 111087 103 84008 26764 75.84 110772 104 79864 25904 75.51 105768 105 78761 25298 75.69 104059 106 77210 24958 75.57 102168 107 74836 24031 75.69 98867 108 74100 23787 75.70 97887 109 69700 22560 75.55 92260 110 67479 22063 75.36 89542 111 66988 21664 75.56 88652 112 65118 21135 75.50 86253 113 61726 20358 75.20 82084 114 61061 20031 75.30 81092 115 59456 19516 75.29 78972 116 58713 19304 75.26 78017 117 56227 19002 74.74 75229 118 53596 18026 74.83 71622 119 52469 17652 74.83 70121 120 50206 17095 74.60 67301 121 48750 16321 74.92 65071 122 48275 16403 74.64 64678 123 47279 16116 74.58 63395 124 46202 15536 74.84 61738 125 44565 15062 74.74 59627 126 43966 14475 75.23 58441 127 41358 14521 74.01 55879 128 39365 13681 74.21 53046 129 39187 13771 74.00 52958 130 37931 13297 74.04 51228 131 37739 13029 74.34 50768 132 36066 12302 74.57 48368 133 34969 12272 74.02 47241 134 33364 11680 74.07 45044 135 32742 11589 73.86 44331 136 31999 11328 73.85 43327 137 31077 11084 73.71 42161 138 29903 10734 73.59 40637 139 29034 10347 73.73 39381 140 28513 10601 72.90 39114 141 27725 10536 72.46 38261 142 27008 10343 72.31 37351 143 26592 9732 73.21 36324 144 25942 9321 73.57 35263 145 21367 4711 81.93 26078 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 23588 1044292 2.21 1067880 2 20436 714525 2.78 734961 3 15968 694532 2.25 710500 4 11673 706756 1.62 718429 5 14066 704764 1.96 718830 6 18104 705715 2.50 723819 7 10204 713893 1.41 724097 8 9861 725285 1.34 735146 9 8720 712389 1.21 721109 10 8063 726082 1.10 734145 11 10154 746304 1.34 756458 12 7062 756356 0.93 763418 13 8782 733494 1.18 742276 14 6504 723997 0.89 730501 15 8329 745831 1.10 754160 16 6441 751195 0.85 757636 17 6715 725725 0.92 732440 18 5802 751531 0.77 757333 19 6005 753952 0.79 759957 20 5588 759845 0.73 765433 21 5726 739686 0.77 745412 22 5486 746609 0.73 752095 23 5340 744450 0.71 749790 24 5462 740389 0.73 745851 25 5074 743842 0.68 748916 26 5680 773992 0.73 779672 27 4893 733409 0.66 738302 28 5355 744241 0.71 749596 29 4898 746352 0.65 751250 30 5467 737458 0.74 742925 31 4857 734605 0.66 739462 32 5858 751385 0.77 757243 33 4989 735757 0.67 740746 34 6071 733890 0.82 739961 35 5032 728007 0.69 733039 36 6209 748268 0.82 754477 37 5081 732868 0.69 737949 38 6176 730189 0.84 736365 39 5327 720859 0.73 726186 40 6044 718964 0.83 725008 41 5541 724537 0.76 730078 42 5569 733200 0.75 738769 43 5723 737034 0.77 742757 44 5820 733730 0.79 739550 45 5848 718437 0.81 724285 46 6056 717809 0.84 723865 47 6116 700728 0.87 706844 48 5955 703932 0.84 709887 49 6460 703331 0.91 709791 50 6214 704472 0.87 710686 51 6778 681919 0.98 688697 52 6346 689994 0.91 696340 53 7061 689644 1.01 696705 54 6315 667300 0.94 673615 55 7001 659282 1.05 666283 56 6477 648653 0.99 655130 57 7231 635050 1.13 642281 58 6660 639785 1.03 646445 59 7281 629609 1.14 636890 60 6596 623291 1.05 629887 61 7162 607492 1.17 614654 62 6788 596966 1.12 603754 63 7097 593706 1.18 600803 64 6891 590570 1.15 597461 65 6967 580180 1.19 587147 66 6880 570033 1.19 576913 67 7099 562263 1.25 569362 68 7260 562581 1.27 569841 69 7046 548015 1.27 555061 70 7373 543096 1.34 550469 71 6913 526326 1.30 533239 72 7267 522229 1.37 529496 73 7074 503890 1.38 510964 74 7171 506732 1.40 513903 75 7274 497163 1.44 504437 76 7374 486391 1.49 493765 77 6787 471759 1.42 478546 78 7163 459767 1.53 466930 79 6746 454834 1.46 461580 80 7090 452594 1.54 459684 81 6531 431899 1.49 438430 82 6897 427435 1.59 434332 83 6506 419188 1.53 425694 84 6662 409432 1.60 416094 85 6378 398846 1.57 405224 86 6483 392007 1.63 398490 87 6258 377136 1.63 383394 88 5993 372263 1.58 378256 89 6055 357340 1.67 363395 90 6048 355527 1.67 361575 91 6098 347069 1.73 353167 92 5877 339260 1.70 345137 93 5864 327304 1.76 333168 94 5669 320931 1.74 326600 95 5548 312648 1.74 318196 96 5526 311821 1.74 317347 97 5589 302048 1.82 307637 98 5312 296063 1.76 301375 99 5490 292531 1.84 298021 100 5158 283596 1.79 288754 101 5205 269842 1.89 275047 102 5009 267817 1.84 272826 103 4955 256230 1.90 261185 104 4749 258182 1.81 262931 105 4728 243492 1.90 248220 106 4615 241819 1.87 246434 107 4526 236538 1.88 241064 108 4390 229813 1.87 234203 109 4388 222331 1.94 226719 110 4238 215928 1.92 220166 111 4219 207878 1.99 212097 112 4260 207253 2.01 211513 113 4002 197777 1.98 201779 114 4200 192544 2.13 196744 115 3884 190067 2.00 193951 116 3922 185149 2.07 189071 117 3614 176971 2.00 180585 118 3658 174178 2.06 177836 119 3490 169408 2.02 172898 120 3622 168548 2.10 172170 121 3562 162244 2.15 165806 122 3527 159710 2.16 163237 123 3216 150737 2.09 153953 124 3341 149409 2.19 152750 125 3215 143396 2.19 146611 126 3343 141700 2.30 145043 127 3175 136264 2.28 139439 128 3013 132489 2.22 135502 129 2845 126081 2.21 128926 130 2906 124828 2.28 127734 131 2821 121360 2.27 124181 132 2705 117232 2.26 119937 133 2654 112105 2.31 114759 134 2568 109244 2.30 111812 135 2555 105705 2.36 108260 136 2552 105468 2.36 108020 137 2505 100198 2.44 102703 138 2585 97907 2.57 100492 139 2576 94784 2.65 97360 140 2658 93786 2.76 96444 141 2626 92189 2.77 94815 142 2763 90661 2.96 93424 143 2869 84967 3.27 87836 144 2737 81270 3.26 84007 145 2081 43398 4.58 45479 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 106010 1797169 5.57 1903179 2 96027 2036261 4.50 2132288 3 88530 2019756 4.20 2108286 4 72337 1923288 3.62 1995625 5 64885 1832432 3.42 1897317 6 61464 1813865 3.28 1875329 7 56757 1766569 3.11 1823326 8 52244 1754681 2.89 1806925 9 51711 1719352 2.92 1771063 10 48573 1728886 2.73 1777459 11 50433 1753608 2.80 1804041 12 44032 1703841 2.52 1747873 13 43293 1678731 2.51 1722024 14 42786 1697805 2.46 1740591 15 44435 1685693 2.57 1730128 16 42181 1683911 2.44 1726092 17 42546 1660942 2.50 1703488 18 41689 1676541 2.43 1718230 19 40645 1661629 2.39 1702274 20 41891 1661526 2.46 1703417 21 39742 1680584 2.31 1720326 22 42074 1677328 2.45 1719402 23 38106 1688304 2.21 1726410 24 42801 1677587 2.49 1720388 25 36697 1682275 2.13 1718972 26 42255 1696112 2.43 1738367 27 36182 1719256 2.06 1755438 28 41145 1708929 2.35 1750074 29 35626 1708907 2.04 1744533 30 40847 1722532 2.32 1763379 31 33794 1709336 1.94 1743130 32 39979 1744143 2.24 1784122 33 33629 1731842 1.90 1765471 34 39408 1710652 2.25 1750060 35 33437 1727466 1.90 1760903 36 38852 1704415 2.23 1743267 37 33461 1688911 1.94 1722372 38 38650 1689442 2.24 1728092 39 34289 1705182 1.97 1739471 40 37882 1689198 2.19 1727080 41 35152 1692281 2.03 1727433 42 38635 1693009 2.23 1731644 43 35495 1677159 2.07 1712654 44 38036 1676549 2.22 1714585 45 36786 1662294 2.17 1699080 46 37656 1652232 2.23 1689888 47 37465 1643497 2.23 1680962 48 37637 1645804 2.24 1683441 49 37403 1620470 2.26 1657873 50 37436 1617183 2.26 1654619 51 37969 1603040 2.31 1641009 52 36913 1590843 2.27 1627756 53 38016 1576724 2.35 1614740 54 37157 1555520 2.33 1592677 55 37295 1548206 2.35 1585501 56 36835 1526300 2.36 1563135 57 37732 1508179 2.44 1545911 58 36975 1480477 2.44 1517452 59 37379 1486219 2.45 1523598 60 37057 1480659 2.44 1517716 61 37267 1450530 2.50 1487797 62 39170 1416876 2.69 1456046 63 36842 1403599 2.56 1440441 64 37657 1377682 2.66 1415339 65 35382 1357940 2.54 1393322 66 38137 1351470 2.74 1389607 67 34644 1314465 2.57 1349109 68 37338 1298562 2.79 1335900 69 34600 1284932 2.62 1319532 70 37431 1263437 2.88 1300868 71 33466 1235718 2.64 1269184 72 36577 1197087 2.96 1233664 73 32426 1179832 2.67 1212258 74 36524 1159239 3.05 1195763 75 32326 1142262 2.75 1174588 76 35453 1119727 3.07 1155180 77 31852 1089685 2.84 1121537 78 35003 1078967 3.14 1113970 79 31333 1056734 2.88 1088067 80 33755 1036500 3.15 1070255 81 31020 1008194 2.98 1039214 82 32470 980938 3.20 1013408 83 29883 964325 3.01 994208 84 32192 948847 3.28 981039 85 29650 929664 3.09 959314 86 30629 910692 3.25 941321 87 28824 896530 3.11 925354 88 29470 858311 3.32 887781 89 28550 838641 3.29 867191 90 28322 828087 3.31 856409 91 27130 800725 3.28 827855 92 27531 786891 3.38 814422 93 26582 771054 3.33 797636 94 26018 744628 3.38 770646 95 25482 735815 3.35 761297 96 25020 714324 3.38 739344 97 24359 697701 3.37 722060 98 24014 680477 3.41 704491 99 23793 668036 3.44 691829 100 22913 649530 3.41 672443 101 22577 632289 3.45 654866 102 22517 615569 3.53 638086 103 21352 596627 3.46 617979 104 21463 582382 3.55 603845 105 20689 567471 3.52 588160 106 20670 552674 3.61 573344 107 19370 537719 3.48 557089 108 19852 524692 3.65 544544 109 18676 517216 3.49 535892 110 18965 500375 3.65 519340 111 18137 490424 3.57 508561 112 18397 476443 3.72 494840 113 17008 462263 3.55 479271 114 18034 453487 3.82 471521 115 16257 440824 3.56 457081 116 17007 428516 3.82 445523 117 15551 417200 3.59 432751 118 16167 403979 3.85 420146 119 15129 396594 3.67 411723 120 15532 387079 3.86 402611 121 14106 373757 3.64 387863 122 14746 363891 3.89 378637 123 13508 355289 3.66 368797 124 14083 342245 3.95 356328 125 13072 332207 3.79 345279 126 13259 324414 3.93 337673 127 12610 318192 3.81 330802 128 12574 309970 3.90 322544 129 12171 302759 3.86 314930 130 12023 293149 3.94 305172 131 11701 284253 3.95 295954 132 11541 278577 3.98 290118 133 10982 272628 3.87 283610 134 10995 263945 4.00 274940 135 10521 255574 3.95 266095 136 10360 248917 4.00 259277 137 10341 242894 4.08 253235 138 10196 235062 4.16 245258 139 10055 229539 4.20 239594 140 10100 222993 4.33 233093 141 10179 217522 4.47 227701 142 10347 211969 4.65 222316 143 10059 205541 4.67 215600 144 9185 193360 4.53 202545 145 6871 101098 6.36 107969 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14581 11568 55.76 26149 2 13977 9992 58.31 23969 3 15615 8731 64.14 24346 4 16345 8732 65.18 25077 5 16242 7637 68.02 23879 6 18346 6715 73.21 25061 7 21393 6438 76.87 27831 8 20013 6374 75.84 26387 9 16306 6471 71.59 22777 10 15673 6155 71.80 21828 11 15916 6191 72.00 22107 12 14910 6438 69.84 21348 13 15135 5385 73.76 20520 14 14797 5055 74.54 19852 15 15115 5167 74.52 20282 16 14097 4809 74.56 18906 17 14155 4787 74.73 18942 18 14011 4840 74.32 18851 19 12951 4418 74.56 17369 20 11842 3942 75.03 15784 21 12203 4091 74.89 16294 22 12036 4021 74.96 16057 23 11775 3847 75.37 15622 24 11312 3711 75.30 15023 25 11423 3700 75.53 15123 26 10559 3475 75.24 14034 27 10536 3393 75.64 13929 28 10292 3226 76.14 13518 29 10029 3197 75.83 13226 30 9884 3076 76.27 12960 31 9583 2936 76.55 12519 32 9494 2742 77.59 12236 33 9020 2783 76.42 11803 34 9148 2712 77.13 11860 35 8608 2572 76.99 11180 36 8452 2577 76.63 11029 37 8331 2531 76.70 10862 38 7794 2351 76.83 10145 39 7860 2352 76.97 10212 40 7331 2233 76.65 9564 41 7322 2214 76.78 9536 42 6865 2023 77.24 8888 43 6925 2138 76.41 9063 44 6680 2102 76.06 8782 45 6470 1891 77.38 8361 46 6147 1851 76.86 7998 47 6322 1776 78.07 8098 48 5749 1740 76.77 7489 49 5670 1779 76.12 7449 50 5513 1729 76.13 7242 51 5381 1707 75.92 7088 52 5056 1549 76.55 6605 53 5170 1597 76.40 6767 54 5025 1523 76.74 6548 55 4862 1467 76.82 6329 56 4714 1349 77.75 6063 57 4751 1478 76.27 6229 58 4636 1402 76.78 6038 59 4627 1335 77.61 5962 60 4169 1314 76.04 5483 61 4244 1321 76.26 5565 62 4077 1216 77.03 5293 63 4064 1196 77.26 5260 64 3617 1141 76.02 4758 65 3546 1144 75.61 4690 66 3614 1140 76.02 4754 67 3499 1036 77.16 4535 68 3452 1059 76.52 4511 69 3433 1089 75.92 4522 70 3237 999 76.42 4236 71 3245 925 77.82 4170 72 3254 950 77.40 4204 73 3048 901 77.18 3949 74 3026 908 76.92 3934 75 2901 887 76.58 3788 76 2881 864 76.93 3745 77 2759 823 77.02 3582 78 2958 813 78.44 3771 79 2623 792 76.81 3415 80 2597 781 76.88 3378 81 2487 748 76.88 3235 82 2423 710 77.34 3133 83 2228 730 75.32 2958 84 2265 711 76.11 2976 85 2209 667 76.81 2876 86 2305 685 77.09 2990 87 2285 703 76.47 2988 88 2123 664 76.18 2787 89 2217 621 78.12 2838 90 2012 635 76.01 2647 91 1964 594 76.78 2558 92 1921 584 76.69 2505 93 1774 560 76.01 2334 94 1832 597 75.42 2429 95 1876 470 79.97 2346 96 1806 516 77.78 2322 97 1723 578 74.88 2301 98 1715 484 77.99 2199 99 1711 517 76.80 2228 100 1590 501 76.04 2091 101 1432 445 76.29 1877 102 1414 483 74.54 1897 103 1487 470 75.98 1957 104 1428 430 76.86 1858 105 1408 425 76.81 1833 106 1448 442 76.61 1890 107 1370 393 77.71 1763 108 1275 424 75.04 1699 109 1214 385 75.92 1599 110 1216 387 75.86 1603 111 1173 385 75.29 1558 112 1160 375 75.57 1535 113 1074 352 75.32 1426 114 1113 356 75.77 1469 115 1015 339 74.96 1354 116 1041 353 74.68 1394 117 1018 315 76.37 1333 118 963 298 76.37 1261 119 962 325 74.75 1287 120 855 257 76.89 1112 121 915 250 78.54 1165 122 891 293 75.25 1184 123 837 285 74.60 1122 124 851 274 75.64 1125 125 863 256 77.12 1119 126 791 249 76.06 1040 127 761 248 75.42 1009 128 710 214 76.84 924 129 789 243 76.45 1032 130 717 267 72.87 984 131 797 219 78.44 1016 132 666 225 74.75 891 133 655 225 74.43 880 134 629 200 75.87 829 135 656 208 75.93 864 136 595 198 75.03 793 137 550 214 71.99 764 138 537 190 73.87 727 139 568 223 71.81 791 140 563 198 73.98 761 141 548 170 76.32 718 142 517 182 73.96 699 143 568 193 74.64 761 144 485 143 77.23 628 145 331 75 81.53 406 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 5795 103703 5.29 109498 2 4657 70524 6.19 75181 3 3738 63605 5.55 67343 4 2520 62177 3.90 64697 5 4305 60014 6.69 64319 6 6669 57172 10.45 63841 7 2316 58199 3.83 60515 8 2108 56972 3.57 59080 9 1563 56888 2.67 58451 10 1886 53880 3.38 55766 11 2827 52283 5.13 55110 12 1112 55500 1.96 56612 13 1483 49380 2.92 50863 14 999 48177 2.03 49176 15 1194 46697 2.49 47891 16 872 46535 1.84 47407 17 950 44340 2.10 45290 18 716 44156 1.60 44872 19 716 43014 1.64 43730 20 657 42823 1.51 43480 21 604 41401 1.44 42005 22 541 39883 1.34 40424 23 492 39531 1.23 40023 24 558 38571 1.43 39129 25 442 37370 1.17 37812 26 510 38009 1.32 38519 27 392 35280 1.10 35672 28 478 34925 1.35 35403 29 346 34037 1.01 34383 30 467 33757 1.36 34224 31 348 32254 1.07 32602 32 477 32177 1.46 32654 33 268 31056 0.86 31324 34 475 30434 1.54 30909 35 269 29969 0.89 30238 36 460 29646 1.53 30106 37 262 27878 0.93 28140 38 402 27791 1.43 28193 39 266 26391 1.00 26657 40 353 26060 1.34 26413 41 258 25184 1.01 25442 42 313 25254 1.22 25567 43 265 24111 1.09 24376 44 305 24261 1.24 24566 45 292 23271 1.24 23563 46 322 22757 1.40 23079 47 255 21569 1.17 21824 48 210 22005 0.95 22215 49 266 20499 1.28 20765 50 241 20438 1.17 20679 51 265 19148 1.37 19413 52 216 19209 1.11 19425 53 295 19012 1.53 19307 54 215 18588 1.14 18803 55 299 17893 1.64 18192 56 234 17525 1.32 17759 57 303 16304 1.82 16607 58 193 16615 1.15 16808 59 306 15949 1.88 16255 60 217 15626 1.37 15843 61 259 14965 1.70 15224 62 199 15096 1.30 15295 63 219 14637 1.47 14856 64 177 14668 1.19 14845 65 219 13793 1.56 14012 66 169 13574 1.23 13743 67 203 13036 1.53 13239 68 207 13328 1.53 13535 69 193 12601 1.51 12794 70 188 12620 1.47 12808 71 183 11881 1.52 12064 72 209 11976 1.72 12185 73 181 11626 1.53 11807 74 222 11486 1.90 11708 75 187 11064 1.66 11251 76 204 11079 1.81 11283 77 190 10273 1.82 10463 78 221 10468 2.07 10689 79 168 10067 1.64 10235 80 199 10030 1.95 10229 81 136 9306 1.44 9442 82 214 9533 2.20 9747 83 147 8813 1.64 8960 84 200 8839 2.21 9039 85 129 8665 1.47 8794 86 142 8581 1.63 8723 87 147 8323 1.74 8470 88 154 8219 1.84 8373 89 135 7815 1.70 7950 90 140 7710 1.78 7850 91 139 7753 1.76 7892 92 129 7369 1.72 7498 93 143 7168 1.96 7311 94 133 6877 1.90 7010 95 148 6835 2.12 6983 96 115 6890 1.64 7005 97 147 6529 2.20 6676 98 129 6348 1.99 6477 99 117 6233 1.84 6350 100 99 6130 1.59 6229 101 156 5927 2.56 6083 102 102 5840 1.72 5942 103 144 5463 2.57 5607 104 86 5622 1.51 5708 105 118 5336 2.16 5454 106 89 5252 1.67 5341 107 100 5178 1.89 5278 108 82 5058 1.60 5140 109 89 4832 1.81 4921 110 96 4861 1.94 4957 111 83 4836 1.69 4919 112 94 4755 1.94 4849 113 69 4433 1.53 4502 114 61 4411 1.36 4472 115 60 4173 1.42 4233 116 79 4241 1.83 4320 117 75 4101 1.80 4176 118 76 4090 1.82 4166 119 63 3818 1.62 3881 120 66 3855 1.68 3921 121 62 3760 1.62 3822 122 87 3666 2.32 3753 123 55 3660 1.48 3715 124 53 3692 1.42 3745 125 56 3379 1.63 3435 126 61 3391 1.77 3452 127 67 3316 1.98 3383 128 59 3151 1.84 3210 129 51 3245 1.55 3296 130 69 2994 2.25 3063 131 48 3006 1.57 3054 132 61 2927 2.04 2988 133 51 2768 1.81 2819 134 55 2747 1.96 2802 135 41 2730 1.48 2771 136 48 2793 1.69 2841 137 46 2491 1.81 2537 138 44 2506 1.73 2550 139 39 2432 1.58 2471 140 46 2454 1.84 2500 141 50 2498 1.96 2548 142 36 2411 1.47 2447 143 38 2203 1.70 2241 144 46 2045 2.20 2091 145 31 948 3.17 979 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 24652 182893 11.88 207545 2 18573 199378 8.52 217951 3 18799 186003 9.18 204802 4 12012 176758 6.36 188770 5 11198 162854 6.43 174052 6 11508 153924 6.96 165432 7 11019 144151 7.10 155170 8 8898 142336 5.88 151234 9 8717 137661 5.96 146378 10 9043 135640 6.25 144683 11 10747 131833 7.54 142580 12 6856 128030 5.08 134886 13 6874 121004 5.38 127878 14 6641 119073 5.28 125714 15 6777 116382 5.50 123159 16 6075 111938 5.15 118013 17 6043 108842 5.26 114885 18 5938 106563 5.28 112501 19 5535 103196 5.09 108731 20 5619 101705 5.24 107324 21 5257 100691 4.96 105948 22 5550 97227 5.40 102777 23 4716 94681 4.74 99397 24 5468 92356 5.59 97824 25 4341 90573 4.57 94914 26 4985 87496 5.39 92481 27 4250 87911 4.61 92161 28 4665 85690 5.16 90355 29 3966 82982 4.56 86948 30 4571 80410 5.38 84981 31 3661 78824 4.44 82485 32 4256 78790 5.12 83046 33 3484 76970 4.33 80454 34 4079 74785 5.17 78864 35 3272 72248 4.33 75520 36 3991 69911 5.40 73902 37 3159 67713 4.46 70872 38 3887 66853 5.49 70740 39 3200 65811 4.64 69011 40 3571 62956 5.37 66527 41 3128 61641 4.83 64769 42 3668 60324 5.73 63992 43 3133 57998 5.13 61131 44 3459 56160 5.80 59619 45 3212 55177 5.50 58389 46 3333 53678 5.85 57011 47 3206 52183 5.79 55389 48 3245 51113 5.97 54358 49 3157 50578 5.88 53735 50 3162 48096 6.17 51258 51 3125 47945 6.12 51070 52 2991 46843 6.00 49834 53 2899 45663 5.97 48562 54 3037 43974 6.46 47011 55 2754 42752 6.05 45506 56 2855 41957 6.37 44812 57 2763 41023 6.31 43786 58 2776 39812 6.52 42588 59 2629 39409 6.25 42038 60 2712 38807 6.53 41519 61 2500 37496 6.25 39996 62 2798 36225 7.17 39023 63 2457 35276 6.51 37733 64 2722 34909 7.23 37631 65 2355 33288 6.61 35643 66 2778 32807 7.81 35585 67 2226 32384 6.43 34610 68 2645 31484 7.75 34129 69 2268 30607 6.90 32875 70 2594 29759 8.02 32353 71 2185 29065 6.99 31250 72 2531 28352 8.20 30883 73 2077 27617 6.99 29694 74 2594 27111 8.73 29705 75 1969 26483 6.92 28452 76 2394 26168 8.38 28562 77 2027 25329 7.41 27356 78 2333 24614 8.66 26947 79 1931 24113 7.41 26044 80 2202 23386 8.61 25588 81 1872 23025 7.52 24897 82 2146 21883 8.93 24029 83 1857 21748 7.87 23605 84 2051 21589 8.68 23640 85 1841 20675 8.18 22516 86 1979 20158 8.94 22137 87 1843 20067 8.41 21910 88 1782 19402 8.41 21184 89 1819 19025 8.73 20844 90 1814 18287 9.02 20101 91 1589 18030 8.10 19619 92 1677 17771 8.62 19448 93 1626 17564 8.47 19190 94 1681 16940 9.03 18621 95 1471 16321 8.27 17792 96 1591 16074 9.01 17665 97 1476 16023 8.43 17499 98 1442 15384 8.57 16826 99 1429 15058 8.67 16487 100 1394 14924 8.54 16318 101 1343 14563 8.44 15906 102 1382 14284 8.82 15666 103 1252 13826 8.30 15078 104 1311 13532 8.83 14843 105 1197 13257 8.28 14454 106 1260 12768 8.98 14028 107 1176 12646 8.51 13822 108 1174 12053 8.88 13227 109 1080 11919 8.31 12999 110 1152 11523 9.09 12675 111 1058 11395 8.50 12453 112 1124 11303 9.04 12427 113 1019 11015 8.47 12034 114 1135 10843 9.48 11978 115 898 10414 7.94 11312 116 1013 10131 9.09 11144 117 867 10002 7.98 10869 118 979 9734 9.14 10713 119 856 9527 8.24 10383 120 911 9643 8.63 10554 121 823 9171 8.23 9994 122 897 9047 9.02 9944 123 779 8721 8.20 9500 124 863 8585 9.13 9448 125 756 8402 8.26 9158 126 823 8100 9.22 8923 127 711 7967 8.19 8678 128 766 7844 8.90 8610 129 697 7794 8.21 8491 130 683 7600 8.25 8283 131 676 7429 8.34 8105 132 674 7361 8.39 8035 133 595 7137 7.70 7732 134 715 6952 9.33 7667 135 613 6761 8.31 7374 136 584 6533 8.21 7117 137 606 6419 8.63 7025 138 592 6338 8.54 6930 139 575 6226 8.45 6801 140 549 6077 8.29 6626 141 552 5845 8.63 6397 142 553 5797 8.71 6350 143 462 5604 7.62 6066 144 461 5168 8.19 5629 145 385 2376 13.94 2761