CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 95646 55074 63.46 150720 2 99092 51086 65.98 150178 3 111432 52207 68.10 163639 4 118001 49970 70.25 167971 5 121680 48860 71.35 170540 6 134380 47631 73.83 182011 7 144105 47546 75.19 191651 8 139531 45764 75.30 185295 9 143656 47801 75.03 191457 10 137744 45416 75.20 183160 11 141827 47549 74.89 189376 12 141137 46101 75.38 187238 13 143325 48037 74.90 191362 14 143948 45852 75.84 189800 15 148570 47605 75.73 196175 16 149395 47052 76.05 196447 17 150622 48755 75.55 199377 18 151023 47541 76.06 198564 19 150252 47607 75.94 197859 20 144902 45065 76.28 189967 21 151268 47087 76.26 198355 22 148260 45951 76.34 194211 23 152218 47996 76.03 200214 24 145292 46764 75.65 192056 25 148710 46637 76.13 195347 26 145425 46000 75.97 191425 27 148330 46248 76.23 194578 28 153337 47367 76.40 200704 29 150290 46506 76.37 196796 30 152587 46562 76.62 199149 31 149600 46513 76.28 196113 32 151957 45956 76.78 197913 33 152536 46601 76.60 199137 34 152616 46025 76.83 198641 35 152320 46731 76.52 199051 36 152247 46009 76.79 198256 37 151706 46085 76.70 197791 38 151921 45566 76.93 197487 39 151825 45457 76.96 197282 40 145834 44959 76.44 190793 41 151715 45602 76.89 197317 42 146829 44821 76.61 191650 43 151983 45628 76.91 197611 44 146162 44960 76.48 191122 45 148720 45275 76.66 193995 46 145552 44670 76.52 190222 47 150276 44668 77.09 194944 48 149806 44358 77.15 194164 49 148720 45240 76.68 193960 50 144498 44155 76.59 188653 51 147464 44676 76.75 192140 52 144407 43823 76.72 188230 53 148300 45421 76.55 193721 54 146092 43674 76.99 189766 55 145158 44281 76.63 189439 56 142264 42718 76.91 184982 57 145045 44275 76.61 189320 58 144790 43149 77.04 187939 59 142416 43254 76.70 185670 60 141736 43354 76.58 185090 61 142285 43060 76.77 185345 62 138477 42185 76.65 180662 63 140086 43082 76.48 183168 64 134549 40673 76.79 175222 65 134239 41794 76.26 176033 66 133010 41473 76.23 174483 67 133141 41167 76.38 174308 68 133373 41394 76.31 174767 69 133481 40500 76.72 173981 70 129069 39871 76.40 168940 71 129738 39556 76.63 169294 72 129953 39364 76.75 169317 73 129833 39617 76.62 169450 74 128378 38858 76.76 167236 75 129442 39073 76.81 168515 76 126374 37956 76.90 164330 77 129220 38648 76.98 167868 78 125195 37892 76.77 163087 79 122337 37715 76.44 160052 80 122360 37402 76.59 159762 81 117463 36150 76.47 153613 82 117345 36061 76.49 153406 83 117723 35945 76.61 153668 84 115928 36329 76.14 152257 85 116724 36361 76.25 153085 86 115453 35461 76.50 150914 87 114039 35627 76.20 149666 88 113207 34014 76.90 147221 89 113548 35067 76.40 148615 90 110522 34130 76.41 144652 91 108562 33573 76.38 142135 92 109474 33176 76.74 142650 93 105217 32455 76.43 137672 94 105340 32883 76.21 138223 95 105403 32716 76.31 138119 96 102857 32218 76.15 135075 97 102971 31940 76.33 134911 98 100328 30792 76.52 131120 99 98959 31318 75.96 130277 100 97351 30246 76.30 127597 101 95911 30578 75.83 126489 102 95176 30008 76.03 125184 103 97618 30404 76.25 128022 104 92750 29832 75.66 122582 105 93093 29592 75.88 122685 106 93206 29128 76.19 122334 107 90858 28871 75.89 119729 108 89442 28862 75.60 118304 109 88297 28121 75.84 116418 110 86422 27822 75.65 114244 111 86102 27096 76.06 113198 112 86001 27254 75.94 113255 113 83845 27273 75.46 111118 114 82154 26462 75.64 108616 115 81925 26565 75.51 108490 116 82046 25734 76.12 107780 117 80101 26209 75.35 106310 118 77846 25887 75.04 103733 119 79039 25398 75.68 104437 120 75581 24770 75.32 100351 121 75425 24646 75.37 100071 122 75025 24541 75.35 99566 123 75279 24027 75.81 99306 124 73806 24117 75.37 97923 125 71070 23961 74.79 95031 126 70799 23534 75.05 94333 127 69931 23332 74.98 93263 128 67935 22829 74.85 90764 129 66819 22527 74.79 89346 130 67576 22709 74.85 90285 131 67304 22193 75.20 89497 132 65175 21888 74.86 87063 133 64060 21241 75.10 85301 134 63087 20798 75.21 83885 135 63199 21009 75.05 84208 136 60603 21064 74.21 81667 137 60158 20379 74.70 80537 138 58973 20465 74.24 79438 139 59153 20737 74.04 79890 140 57809 20391 73.92 78200 141 58025 19232 75.11 77257 142 57471 19621 74.55 77092 143 55953 19405 74.25 75358 144 55190 18487 74.91 73677 145 46351 9065 83.64 55416 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 19653 887091 2.17 906744 2 17366 599741 2.81 617107 3 14083 561290 2.45 575373 4 10704 580547 1.81 591251 5 12652 570220 2.17 582872 6 15260 569777 2.61 585037 7 10038 580108 1.70 590146 8 9396 584843 1.58 594239 9 9188 572731 1.58 581919 10 7848 592237 1.31 600085 11 10294 597333 1.69 607627 12 6877 607624 1.12 614501 13 9258 594425 1.53 603683 14 6678 593268 1.11 599946 15 8730 600289 1.43 609019 16 6839 604038 1.12 610877 17 7132 587887 1.20 595019 18 5907 603852 0.97 609759 19 6069 599391 1.00 605460 20 6067 613715 0.98 619782 21 5712 599450 0.94 605162 22 5807 603961 0.95 609768 23 5480 602594 0.90 608074 24 5867 607888 0.96 613755 25 5256 600534 0.87 605790 26 5727 622339 0.91 628066 27 4794 593345 0.80 598139 28 5695 605873 0.93 611568 29 4980 601261 0.82 606241 30 6227 606321 1.02 612548 31 4760 595977 0.79 600737 32 6431 615478 1.03 621909 33 5213 603207 0.86 608420 34 6512 610478 1.06 616990 35 5206 600636 0.86 605842 36 6678 627537 1.05 634215 37 4855 598866 0.80 603721 38 6414 612397 1.04 618811 39 5103 598698 0.85 603801 40 6085 609196 0.99 615281 41 5108 598100 0.85 603208 42 5466 615024 0.88 620490 43 5259 608498 0.86 613757 44 5191 611375 0.84 616566 45 5293 595628 0.88 600921 46 5235 605283 0.86 610518 47 5533 589453 0.93 594986 48 5055 594903 0.84 599958 49 5773 590784 0.97 596557 50 5313 603491 0.87 608804 51 5904 582526 1.00 588430 52 5355 593865 0.89 599220 53 6233 583616 1.06 589849 54 5315 585614 0.90 590929 55 5826 574654 1.00 580480 56 5322 588550 0.90 593872 57 6030 566554 1.05 572584 58 5237 581785 0.89 587022 59 6124 567413 1.07 573537 60 5350 573765 0.92 579115 61 5843 560929 1.03 566772 62 5382 568459 0.94 573841 63 5905 558201 1.05 564106 64 5391 563406 0.95 568797 65 5605 554203 1.00 559808 66 5439 556103 0.97 561542 67 5555 545993 1.01 551548 68 5864 562412 1.03 568276 69 5331 543511 0.97 548842 70 6093 552781 1.09 558874 71 5431 539025 1.00 544456 72 6153 549039 1.11 555192 73 5502 532830 1.02 538332 74 6177 539950 1.13 546127 75 5625 530094 1.05 535719 76 6367 536883 1.17 543250 77 5262 517965 1.01 523227 78 6102 516603 1.17 522705 79 5312 510948 1.03 516260 80 5998 519019 1.14 525017 81 5192 499519 1.03 504711 82 5965 506812 1.16 512777 83 5465 492494 1.10 497959 84 5726 497550 1.14 503276 85 5427 484243 1.11 489670 86 5693 488492 1.15 494185 87 5527 475550 1.15 481077 88 5287 482996 1.08 488283 89 5370 461953 1.15 467323 90 5087 473043 1.06 478130 91 5471 467227 1.16 472698 92 5265 463829 1.12 469094 93 5367 450060 1.18 455427 94 5103 450681 1.12 455784 95 5425 444997 1.20 450422 96 5167 451704 1.13 456871 97 5397 441323 1.21 446720 98 4937 439455 1.11 444392 99 5287 433655 1.20 438942 100 5087 434376 1.16 439463 101 5403 421764 1.26 427167 102 4937 421998 1.16 426935 103 5344 411792 1.28 417136 104 4913 421038 1.15 425951 105 4987 403543 1.22 408530 106 4859 408979 1.17 413838 107 4966 401523 1.22 406489 108 4764 397896 1.18 402660 109 4874 389019 1.24 393893 110 4744 389368 1.20 394112 111 4666 378009 1.22 382675 112 4721 385076 1.21 389797 113 4583 370413 1.22 374996 114 4930 371524 1.31 376454 115 4314 365760 1.17 370074 116 4820 371536 1.28 376356 117 4495 355855 1.25 360350 118 4633 354281 1.29 358914 119 4392 347350 1.25 351742 120 4678 350213 1.32 354891 121 4363 341515 1.26 345878 122 4570 342648 1.32 347218 123 4149 333239 1.23 337388 124 4647 336984 1.36 341631 125 4375 323668 1.33 328043 126 4415 325881 1.34 330296 127 4245 317550 1.32 321795 128 4565 317910 1.42 322475 129 4122 308176 1.32 312298 130 4272 308293 1.37 312565 131 3978 306606 1.28 310584 132 3886 304072 1.26 307958 133 4147 292180 1.40 296327 134 4100 291950 1.38 296050 135 4044 283953 1.40 287997 136 4111 292435 1.39 296546 137 3903 277592 1.39 281495 138 3972 276646 1.42 280618 139 4394 275438 1.57 279832 140 4148 274553 1.49 278701 141 4423 269526 1.61 273949 142 4585 269245 1.67 273830 143 4504 259245 1.71 263749 144 4314 249660 1.70 253974 145 3407 125589 2.64 128996 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 105241 1567240 6.29 1672481 2 100311 1781561 5.33 1881872 3 92865 1767864 4.99 1860729 4 82396 1698252 4.63 1780648 5 77951 1660758 4.48 1738709 6 74257 1652129 4.30 1726386 7 71228 1618678 4.21 1689906 8 65335 1617603 3.88 1682938 9 67889 1603080 4.06 1670969 10 62964 1584503 3.82 1647467 11 63729 1598955 3.83 1662684 12 59910 1559544 3.70 1619454 13 59520 1547822 3.70 1607342 14 59084 1554812 3.66 1613896 15 61912 1548533 3.84 1610445 16 58251 1533873 3.66 1592124 17 60245 1518336 3.82 1578581 18 58594 1515129 3.72 1573723 19 56387 1504339 3.61 1560726 20 58615 1502350 3.76 1560965 21 56906 1537448 3.57 1594354 22 60336 1517474 3.82 1577810 23 52816 1528511 3.34 1581327 24 62011 1511369 3.94 1573380 25 50843 1519997 3.24 1570840 26 61337 1520829 3.88 1582166 27 51882 1536453 3.27 1588335 28 59052 1535349 3.70 1594401 29 49680 1535158 3.13 1584838 30 60172 1543929 3.75 1604101 31 46655 1541983 2.94 1588638 32 58620 1566723 3.61 1625343 33 48294 1562712 3.00 1611006 34 57554 1554390 3.57 1611944 35 47967 1564166 2.98 1612133 36 57931 1553337 3.60 1611268 37 47116 1544007 2.96 1591123 38 56316 1547857 3.51 1604173 39 48689 1555915 3.03 1604604 40 54019 1540693 3.39 1594712 41 50052 1546845 3.13 1596897 42 56642 1550876 3.52 1607518 43 48830 1539763 3.07 1588593 44 56007 1537370 3.51 1593377 45 50727 1540936 3.19 1591663 46 54118 1538014 3.40 1592132 47 51563 1552617 3.21 1604180 48 53894 1542547 3.38 1596441 49 51541 1532346 3.25 1583887 50 52706 1530766 3.33 1583472 51 53323 1529080 3.37 1582403 52 51167 1528317 3.24 1579484 53 51518 1528255 3.26 1579773 54 53112 1516897 3.38 1570009 55 49880 1511815 3.19 1561695 56 50499 1513230 3.23 1563729 57 50714 1505471 3.26 1556185 58 51731 1488111 3.36 1539842 59 50408 1506248 3.24 1556656 60 51317 1502051 3.30 1553368 61 49436 1490742 3.21 1540178 62 53010 1476572 3.47 1529582 63 48856 1475346 3.21 1524202 64 51651 1470611 3.39 1522262 65 47479 1468543 3.13 1516022 66 54053 1462402 3.56 1516455 67 45923 1453582 3.06 1499505 68 52013 1438685 3.49 1490698 69 47585 1436783 3.21 1484368 70 52307 1425298 3.54 1477605 71 45986 1415588 3.15 1461574 72 51485 1404234 3.54 1455719 73 43964 1393807 3.06 1437771 74 52474 1385179 3.65 1437653 75 43664 1375971 3.08 1419635 76 49040 1370456 3.45 1419496 77 44350 1359185 3.16 1403535 78 49806 1347969 3.56 1397775 79 42594 1338791 3.08 1381385 80 48486 1334529 3.51 1383015 81 43611 1318475 3.20 1362086 82 47462 1297730 3.53 1345192 83 40961 1300398 3.05 1341359 84 47289 1291662 3.53 1338951 85 42497 1284299 3.20 1326796 86 45286 1277913 3.42 1323199 87 41945 1272215 3.19 1314160 88 43116 1250737 3.33 1293853 89 42495 1239739 3.31 1282234 90 43718 1232224 3.43 1275942 91 39128 1219960 3.11 1259088 92 41811 1210037 3.34 1251848 93 41202 1203155 3.31 1244357 94 40972 1184429 3.34 1225401 95 39600 1175526 3.26 1215126 96 40110 1161043 3.34 1201153 97 38556 1152371 3.24 1190927 98 39208 1143339 3.32 1182547 99 38622 1132466 3.30 1171088 100 38030 1119699 3.28 1157729 101 37012 1112083 3.22 1149095 102 38253 1105682 3.34 1143935 103 35014 1090908 3.11 1125922 104 36931 1078065 3.31 1114996 105 36181 1067860 3.28 1104041 106 35582 1059682 3.25 1095264 107 34162 1047656 3.16 1081818 108 36153 1039483 3.36 1075636 109 33073 1031438 3.11 1064511 110 34867 1012362 3.33 1047229 111 32858 1010827 3.15 1043685 112 34207 998415 3.31 1032622 113 32031 983420 3.15 1015451 114 34245 971862 3.40 1006107 115 29981 957977 3.03 987958 116 34147 950424 3.47 984571 117 29824 942416 3.07 972240 118 32265 931272 3.35 963537 119 29911 922511 3.14 952422 120 31222 915175 3.30 946397 121 28491 907126 3.05 935617 122 30773 893548 3.33 924321 123 28019 882428 3.08 910447 124 29909 867552 3.33 897461 125 27078 860869 3.05 887947 126 29278 849962 3.33 879240 127 26436 841584 3.05 868020 128 27754 831815 3.23 859569 129 27506 826283 3.22 853789 130 26760 810968 3.19 837728 131 25539 803303 3.08 828842 132 26905 796650 3.27 823555 133 24922 792095 3.05 817017 134 27252 781090 3.37 808342 135 24726 765993 3.13 790719 136 24865 760978 3.16 785843 137 24885 757366 3.18 782251 138 25522 745820 3.31 771342 139 24235 739803 3.17 764038 140 24198 730331 3.21 754529 141 24555 721723 3.29 746278 142 24925 711115 3.39 736040 143 23666 702176 3.26 725842 144 21654 671819 3.12 693473 145 15954 338689 4.50 354643 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 31392 21383 59.48 52775 2 32882 19514 62.76 52396 3 36000 19251 65.16 55251 4 38008 18019 67.84 56027 5 38945 17125 69.46 56070 6 43174 16438 72.43 59612 7 45172 16498 73.25 61670 8 44267 15531 74.03 59798 9 42189 15628 72.97 57817 10 41317 15166 73.15 56483 11 42790 15301 73.66 58091 12 41980 15008 73.66 56988 13 41557 14620 73.98 56177 14 41946 14499 74.31 56445 15 41277 14360 74.19 55637 16 41553 14410 74.25 55963 17 41050 14142 74.38 55192 18 41693 13873 75.03 55566 19 41430 13948 74.81 55378 20 38823 13209 74.61 52032 21 39345 13111 75.01 52456 22 38656 12675 75.31 51331 23 39326 13337 74.67 52663 24 37059 12017 75.51 49076 25 37629 12440 75.15 50069 26 35974 11557 75.69 47531 27 36422 11570 75.89 47992 28 35976 11535 75.72 47511 29 36733 11683 75.87 48416 30 35677 11484 75.65 47161 31 34254 11121 75.49 45375 32 34332 10672 76.29 45004 33 34019 11080 75.43 45099 34 33518 10620 75.94 44138 35 33013 10241 76.32 43254 36 31892 10270 75.64 42162 37 32163 10117 76.07 42280 38 31495 9876 76.13 41371 39 31286 10008 75.76 41294 40 29212 9664 75.14 38876 41 31648 9736 76.47 41384 42 28112 8787 76.19 36899 43 30029 9135 76.68 39164 44 28249 9168 75.50 37417 45 28188 8690 76.44 36878 46 28265 8677 76.51 36942 47 28224 8813 76.20 37037 48 28141 8685 76.42 36826 49 27281 8644 75.94 35925 50 26231 8379 75.79 34610 51 26378 8303 76.06 34681 52 25945 8364 75.62 34309 53 26806 8344 76.26 35150 54 24792 8044 75.50 32836 55 24981 8160 75.38 33141 56 24291 7855 75.56 32146 57 24679 8150 75.17 32829 58 23585 7441 76.02 31026 59 23553 7356 76.20 30909 60 23614 7287 76.42 30901 61 23285 7257 76.24 30542 62 22666 7235 75.80 29901 63 22552 7203 75.79 29755 64 21504 6973 75.51 28477 65 20992 6765 75.63 27757 66 21519 6686 76.29 28205 67 20980 6487 76.38 27467 68 20401 6401 76.12 26802 69 20551 6379 76.31 26930 70 19642 6180 76.07 25822 71 19330 6160 75.83 25490 72 19346 6214 75.69 25560 73 19293 6196 75.69 25489 74 19659 5982 76.67 25641 75 19186 5969 76.27 25155 76 18652 5820 76.22 24472 77 19892 6001 76.82 25893 78 18453 5634 76.61 24087 79 17882 5652 75.98 23534 80 18101 5523 76.62 23624 81 16998 5369 76.00 22367 82 16764 5343 75.83 22107 83 17087 5444 75.84 22531 84 16527 5193 76.09 21720 85 16641 5306 75.82 21947 86 16632 5116 76.48 21748 87 15939 5020 76.05 20959 88 15996 5108 75.80 21104 89 16257 4997 76.49 21254 90 16047 4799 76.98 20846 91 15127 4796 75.93 19923 92 15895 4597 77.57 20492 93 14722 4593 76.22 19315 94 15122 4543 76.90 19665 95 14705 4535 76.43 19240 96 14642 4706 75.68 19348 97 14110 4537 75.67 18647 98 13547 4137 76.61 17684 99 13772 4155 76.82 17927 100 13741 4163 76.75 17904 101 13199 4123 76.20 17322 102 13333 4127 76.36 17460 103 13088 4220 75.62 17308 104 12772 4012 76.10 16784 105 13048 4105 76.07 17153 106 12988 3907 76.87 16895 107 12256 3867 76.02 16123 108 12126 3992 75.23 16118 109 11894 3904 75.29 15798 110 12076 3624 76.92 15700 111 11816 3494 77.18 15310 112 11713 3571 76.64 15284 113 11152 3536 75.93 14688 114 11294 3579 75.94 14873 115 11243 3619 75.65 14862 116 10883 3503 75.65 14386 117 10602 3455 75.42 14057 118 10620 3200 76.85 13820 119 10798 3539 75.32 14337 120 10035 3137 76.18 13172 121 9831 3264 75.07 13095 122 10038 3144 76.15 13182 123 9868 3169 75.69 13037 124 9766 3053 76.18 12819 125 9395 3260 74.24 12655 126 9747 3082 75.98 12829 127 9137 3129 74.49 12266 128 9184 2940 75.75 12124 129 9225 3067 75.05 12292 130 9180 3064 74.98 12244 131 9130 3055 74.93 12185 132 8434 2711 75.68 11145 133 8709 2816 75.57 11525 134 8353 2788 74.98 11141 135 8265 2755 75.00 11020 136 8248 2651 75.68 10899 137 8012 2550 75.86 10562 138 7999 2727 74.58 10726 139 7792 2670 74.48 10462 140 7968 2546 75.78 10514 141 7445 2697 73.41 10142 142 7480 2442 75.39 9922 143 7188 2439 74.67 9627 144 7034 2140 76.67 9174 145 5379 1157 82.30 6536 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8967 347575 2.51 356542 2 8007 233435 3.32 241442 3 6642 210975 3.05 217617 4 5012 217559 2.25 222571 5 6032 209372 2.80 215404 6 7255 207523 3.38 214778 7 4308 206008 2.05 210316 8 4015 204361 1.93 208376 9 3780 198738 1.87 202518 10 3586 201354 1.75 204940 11 4321 200501 2.11 204822 12 2995 206211 1.43 209206 13 3544 192129 1.81 195673 14 2748 194918 1.39 197666 15 3220 188889 1.68 192109 16 2847 192393 1.46 195240 17 2855 186623 1.51 189478 18 2269 185491 1.21 187760 19 2341 182683 1.27 185024 20 2232 185697 1.19 187929 21 2089 181668 1.14 183757 22 1936 178376 1.07 180312 23 1823 176903 1.02 178726 24 1886 176199 1.06 178085 25 1702 172206 0.98 173908 26 1855 175722 1.04 177577 27 1678 166048 1.00 167726 28 1689 167526 1.00 169215 29 1488 165259 0.89 166747 30 1723 165965 1.03 167688 31 1429 157883 0.90 159312 32 1773 163619 1.07 165392 33 1374 157926 0.86 159300 34 1579 159876 0.98 161455 35 1292 154277 0.83 155569 36 1680 160056 1.04 161736 37 1192 150062 0.79 151254 38 1460 152896 0.95 154356 39 1154 146123 0.78 147277 40 1329 146497 0.90 147826 41 1185 141148 0.83 142333 42 1251 145664 0.85 146915 43 1089 138938 0.78 140027 44 1173 139026 0.84 140199 45 1117 134256 0.83 135373 46 1129 135939 0.82 137068 47 1223 131685 0.92 132908 48 1126 130412 0.86 131538 49 1121 126240 0.88 127361 50 1060 129212 0.81 130272 51 1157 123941 0.92 125098 52 990 124855 0.79 125845 53 1193 121583 0.97 122776 54 1019 122072 0.83 123091 55 1164 116818 0.99 117982 56 946 121828 0.77 122774 57 1164 115269 1.00 116433 58 939 116012 0.80 116951 59 1087 111557 0.96 112644 60 940 113161 0.82 114101 61 984 110536 0.88 111520 62 923 110183 0.83 111106 63 955 106866 0.89 107821 64 889 108203 0.81 109092 65 883 104334 0.84 105217 66 917 104708 0.87 105625 67 850 101195 0.83 102045 68 1018 102942 0.98 103960 69 862 98810 0.86 99672 70 811 100938 0.80 101749 71 825 98251 0.83 99076 72 883 98182 0.89 99065 73 893 95367 0.93 96260 74 861 94551 0.90 95412 75 794 92823 0.85 93617 76 935 95895 0.97 96830 77 758 89791 0.84 90549 78 906 89934 1.00 90840 79 766 87530 0.87 88296 80 885 90339 0.97 91224 81 727 85043 0.85 85770 82 831 86768 0.95 87599 83 738 82546 0.89 83284 84 777 84607 0.91 85384 85 684 80555 0.84 81239 86 794 81573 0.96 82367 87 686 80050 0.85 80736 88 754 80682 0.93 81436 89 658 76838 0.85 77496 90 715 78753 0.90 79468 91 674 77362 0.86 78036 92 761 76602 0.98 77363 93 592 72942 0.81 73534 94 617 72803 0.84 73420 95 613 72169 0.84 72782 96 660 73606 0.89 74266 97 696 71038 0.97 71734 98 646 70790 0.90 71436 99 622 69134 0.89 69756 100 569 69065 0.82 69634 101 694 67596 1.02 68290 102 596 67082 0.88 67678 103 643 64746 0.98 65389 104 559 67603 0.82 68162 105 597 63140 0.94 63737 106 608 64534 0.93 65142 107 591 62738 0.93 63329 108 504 62646 0.80 63150 109 563 60797 0.92 61360 110 601 59998 0.99 60599 111 547 59665 0.91 60212 112 450 60467 0.74 60917 113 485 57351 0.84 57836 114 500 58005 0.85 58505 115 478 57031 0.83 57509 116 486 57783 0.83 58269 117 523 54884 0.94 55407 118 491 54845 0.89 55336 119 435 53017 0.81 53452 120 483 53981 0.89 54464 121 444 51762 0.85 52206 122 495 51877 0.95 52372 123 458 50187 0.90 50645 124 507 52429 0.96 52936 125 468 49544 0.94 50012 126 446 49895 0.89 50341 127 444 47630 0.92 48074 128 483 49149 0.97 49632 129 398 47503 0.83 47901 130 472 46866 1.00 47338 131 443 46756 0.94 47199 132 405 46790 0.86 47195 133 405 44439 0.90 44844 134 434 45172 0.95 45606 135 431 43430 0.98 43861 136 417 44502 0.93 44919 137 416 42488 0.97 42904 138 436 41762 1.03 42198 139 397 41615 0.94 42012 140 388 41742 0.92 42130 141 415 40750 1.01 41165 142 434 40465 1.06 40899 143 402 38485 1.03 38887 144 321 36565 0.87 36886 145 187 16457 1.12 16644 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 42982 621167 6.47 664149 2 40956 693527 5.58 734483 3 36445 680883 5.08 717328 4 31765 647581 4.68 679346 5 29658 622386 4.55 652044 6 28956 614831 4.50 643787 7 27447 593849 4.42 621296 8 24939 591061 4.05 616000 9 24726 581399 4.08 606125 10 24335 567265 4.11 591600 11 22936 562468 3.92 585404 12 21729 550660 3.80 572389 13 20438 538021 3.66 558459 14 20690 535811 3.72 556501 15 20258 528549 3.69 548807 16 19285 513839 3.62 533124 17 18767 508962 3.56 527729 18 19246 503388 3.68 522634 19 17276 492177 3.39 509453 20 17537 488022 3.47 505559 21 16920 492274 3.32 509194 22 17364 480815 3.49 498179 23 15187 476504 3.09 491691 24 17351 467890 3.58 485241 25 13730 467016 2.86 480746 26 16236 457755 3.43 473991 27 13915 458095 2.95 472010 28 15035 455226 3.20 470261 29 12784 448686 2.77 461470 30 14774 444943 3.21 459717 31 11628 442152 2.56 453780 32 14345 441612 3.15 455957 33 11742 435023 2.63 446765 34 13385 430626 3.01 444011 35 10965 422760 2.53 433725 36 13168 414158 3.08 427326 37 10373 408610 2.48 418983 38 12521 406558 2.99 419079 39 10537 404600 2.54 415137 40 11876 393772 2.93 405648 41 10620 392935 2.63 403555 42 12264 388506 3.06 400770 43 10137 381492 2.59 391629 44 11913 374830 3.08 386743 45 10361 372979 2.70 383340 46 11525 367866 3.04 379391 47 10149 368234 2.68 378383 48 10874 361279 2.92 372153 49 10154 357402 2.76 367556 50 10581 352367 2.92 362948 51 10445 345947 2.93 356392 52 9900 346500 2.78 356400 53 9597 340944 2.74 350541 54 10510 336123 3.03 346633 55 9141 329842 2.70 338983 56 9579 329635 2.82 339214 57 9388 324464 2.81 333852 58 9320 317911 2.85 327231 59 9169 317140 2.81 326309 60 9322 313874 2.88 323196 61 8655 309514 2.72 318169 62 9316 303545 2.98 312861 63 8588 300284 2.78 308872 64 9140 300294 2.95 309434 65 8074 297427 2.64 305501 66 9371 293962 3.09 303333 67 7805 291556 2.61 299361 68 8755 283773 2.99 292528 69 8184 282088 2.82 290272 70 8548 279556 2.97 288104 71 7725 273611 2.75 281336 72 8646 273468 3.06 282114 73 7175 268953 2.60 276128 74 8628 266145 3.14 274773 75 7046 263178 2.61 270224 76 8024 259366 3.00 267390 77 7149 255999 2.72 263148 78 8008 252934 3.07 260942 79 6968 249801 2.71 256769 80 7821 249768 3.04 257589 81 6721 243700 2.68 250421 82 7634 240480 3.08 248114 83 6226 239280 2.54 245506 84 7656 236456 3.14 244112 85 6508 232817 2.72 239325 86 7129 231914 2.98 239043 87 6351 231861 2.67 238212 88 6724 226106 2.89 232830 89 6297 224598 2.73 230895 90 6941 220990 3.05 227931 91 5781 218898 2.57 224679 92 6367 216781 2.85 223148 93 6133 216028 2.76 222161 94 6336 211909 2.90 218245 95 5838 208072 2.73 213910 96 6046 204845 2.87 210891 97 5700 203034 2.73 208734 98 6009 201262 2.90 207271 99 5558 200438 2.70 205996 100 5795 195884 2.87 201679 101 5319 195325 2.65 200644 102 5722 193672 2.87 199394 103 5134 191185 2.62 196319 104 5383 189647 2.76 195030 105 5255 186465 2.74 191720 106 5261 184754 2.77 190015 107 4900 182205 2.62 187105 108 5328 180002 2.87 185330 109 4642 178671 2.53 183313 110 5106 173447 2.86 178553 111 4840 174317 2.70 179157 112 4776 172647 2.69 177423 113 4488 169387 2.58 173875 114 4867 166626 2.84 171493 115 4378 163631 2.61 168009 116 4957 163277 2.95 168234 117 4236 161294 2.56 165530 118 4590 159369 2.80 163959 119 4113 157598 2.54 161711 120 4327 155714 2.70 160041 121 4005 155407 2.51 159412 122 4352 152865 2.77 157217 123 4038 149816 2.62 153854 124 4213 148592 2.76 152805 125 3666 147407 2.43 151073 126 4179 145106 2.80 149285 127 3623 141834 2.49 145457 128 3848 141114 2.65 144962 129 3724 139914 2.59 143638 130 3596 135056 2.59 138652 131 3421 135862 2.46 139283 132 3743 133911 2.72 137654 133 3259 131928 2.41 135187 134 3618 131252 2.68 134870 135 3278 129172 2.47 132450 136 3314 127822 2.53 131136 137 3271 126963 2.51 130234 138 3446 124815 2.69 128261 139 3115 124446 2.44 127561 140 3227 121801 2.58 125028 141 3068 120578 2.48 123646 142 3073 118431 2.53 121504 143 2841 116230 2.39 119071 144 2631 108339 2.37 110970 145 1754 51089 3.32 52843