CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 179113 98493 64.52 277606 2 174508 90512 65.85 265020 3 202644 92926 68.56 295570 4 218633 90651 70.69 309284 5 217893 87575 71.33 305468 6 249671 82101 75.25 331772 7 271157 81939 76.79 353096 8 256027 80340 76.12 336367 9 257001 82541 75.69 339542 10 246739 80769 75.34 327508 11 252460 82331 75.41 334791 12 247534 81088 75.32 328622 13 251104 82943 75.17 334047 14 254461 79392 76.22 333853 15 267302 81331 76.67 348633 16 267946 80526 76.89 348472 17 271553 80977 77.03 352530 18 276884 82519 77.04 359403 19 270482 81603 76.82 352085 20 258557 78264 76.76 336821 21 271440 79977 77.24 351417 22 267153 78674 77.25 345827 23 266666 79662 77.00 346328 24 263807 78697 77.02 342504 25 268272 80452 76.93 348724 26 263733 78283 77.11 342016 27 264732 78457 77.14 343189 28 275858 80292 77.46 356150 29 268627 78651 77.35 347278 30 271459 79230 77.41 350689 31 267130 78035 77.39 345165 32 271353 78197 77.63 349550 33 274378 79669 77.50 354047 34 271893 78679 77.56 350572 35 270086 78301 77.52 348387 36 269616 76901 77.81 346517 37 268690 77182 77.68 345872 38 268555 78379 77.41 346934 39 271353 77289 77.83 348642 40 260837 75600 77.53 336437 41 268284 76926 77.72 345210 42 262921 76046 77.57 338967 43 267173 77140 77.60 344313 44 261881 75669 77.58 337550 45 262857 74791 77.85 337648 46 259816 75830 77.41 335646 47 264830 74561 78.03 339391 48 263898 75095 77.85 338993 49 260290 74725 77.70 335015 50 254656 74047 77.47 328703 51 260361 74683 77.71 335044 52 253329 73717 77.46 327046 53 257836 75005 77.47 332841 54 257164 73383 77.80 330547 55 253083 73042 77.60 326125 56 250656 72252 77.62 322908 57 253010 72586 77.71 325596 58 254390 73583 77.56 327973 59 250095 71713 77.72 321808 60 248031 72359 77.42 320390 61 246200 71077 77.60 317277 62 240100 69684 77.51 309784 63 245043 71071 77.52 316114 64 232982 69304 77.07 302286 65 232463 69279 77.04 301742 66 230634 69319 76.89 299953 67 230099 67633 77.28 297732 68 232019 67600 77.44 299619 69 231675 66899 77.59 298574 70 222725 65750 77.21 288475 71 220906 64915 77.29 285821 72 220915 64949 77.28 285864 73 220310 65155 77.18 285465 74 219726 63811 77.49 283537 75 218416 63781 77.40 282197 76 213423 63247 77.14 276670 77 217249 63091 77.49 280340 78 211786 62039 77.34 273825 79 205071 61282 76.99 266353 80 204085 60488 77.14 264573 81 197948 59655 76.84 257603 82 195172 58094 77.06 253266 83 194438 57687 77.12 252125 84 193343 58467 76.78 251810 85 190843 57410 76.87 248253 86 190010 56050 77.22 246060 87 186356 55492 77.06 241848 88 186230 55342 77.09 241572 89 185368 55181 77.06 240549 90 179983 54033 76.91 234016 91 179194 53110 77.14 232304 92 176424 52797 76.97 229221 93 169957 51627 76.70 221584 94 170817 51242 76.92 222059 95 168412 50329 76.99 218741 96 166761 50482 76.76 217243 97 162876 49479 76.70 212355 98 160957 48754 76.75 209711 99 157221 48169 76.55 205390 100 154773 46485 76.90 201258 101 152175 46039 76.77 198214 102 150775 45513 76.81 196288 103 152285 46378 76.65 198663 104 147400 45394 76.45 192794 105 146472 44805 76.58 191277 106 144431 44212 76.56 188643 107 141572 43430 76.52 185002 108 140772 43331 76.46 184103 109 136207 42096 76.39 178303 110 133208 41731 76.15 174939 111 133292 40953 76.50 174245 112 131763 40497 76.49 172260 113 126399 39750 76.08 166149 114 125794 39354 76.17 165148 115 123698 38650 76.19 162348 116 122293 38048 76.27 160341 117 119611 37671 76.05 157282 118 115871 36515 76.04 152386 119 113973 36206 75.89 150179 120 111176 35980 75.55 147156 121 109299 35158 75.66 144457 122 109684 34321 76.17 144005 123 107844 34253 75.89 142097 124 105776 34069 75.64 139845 125 103596 33184 75.74 136780 126 101607 32626 75.69 134233 127 99354 32414 75.40 131768 128 95490 31386 75.26 126876 129 95112 31304 75.24 126416 130 94245 30968 75.27 125213 131 93668 30394 75.50 124062 132 91510 29531 75.60 121041 133 89350 29280 75.32 118630 134 86812 28651 75.19 115463 135 86361 28419 75.24 114780 136 84295 27869 75.15 112164 137 82616 27142 75.27 109758 138 80675 27349 74.68 108024 139 80257 27197 74.69 107454 140 78275 26779 74.51 105054 141 77231 26408 74.52 103639 142 77000 26473 74.42 103473 143 75094 25331 74.78 100425 144 74078 24208 75.37 98286 145 61934 11605 84.22 73539 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 35040 1267203 2.69 1302243 2 30660 845523 3.50 876183 3 23402 815723 2.79 839125 4 17389 835040 2.04 852429 5 22986 830736 2.69 853722 6 33718 821150 3.94 854868 7 16339 834390 1.92 850729 8 16672 850229 1.92 866901 9 12525 837952 1.47 850477 10 12043 853387 1.39 865430 11 14623 870838 1.65 885461 12 10649 890346 1.18 900995 13 11589 861166 1.33 872755 14 10030 853497 1.16 863527 15 11773 872167 1.33 883940 16 10072 880305 1.13 890377 17 9436 856281 1.09 865717 18 8539 882884 0.96 891423 19 8512 885210 0.95 893722 20 8187 894091 0.91 902278 21 7892 876176 0.89 884068 22 7732 878190 0.87 885922 23 7470 881149 0.84 888619 24 7453 876622 0.84 884075 25 7115 882468 0.80 889583 26 7252 908214 0.79 915466 27 6659 866193 0.76 872852 28 7221 879871 0.81 887092 29 6631 881054 0.75 887685 30 7242 883011 0.81 890253 31 6277 868944 0.72 875221 32 7453 890240 0.83 897693 33 6355 880472 0.72 886827 34 7089 880665 0.80 887754 35 6300 872588 0.72 878888 36 7390 895223 0.82 902613 37 6319 874850 0.72 881169 38 7019 882834 0.79 889853 39 6305 872458 0.72 878763 40 6749 874814 0.77 881563 41 6438 870668 0.73 877106 42 6779 884022 0.76 890801 43 6544 886814 0.73 893358 44 6763 885429 0.76 892192 45 6709 872051 0.76 878760 46 6863 876726 0.78 883589 47 6836 857195 0.79 864031 48 6718 858448 0.78 865166 49 7020 856897 0.81 863917 50 7007 871822 0.80 878829 51 7296 845850 0.86 853146 52 7112 858680 0.82 865792 53 7538 855779 0.87 863317 54 7049 843940 0.83 850989 55 7607 831591 0.91 839198 56 7254 837151 0.86 844405 57 7758 815808 0.94 823566 58 7360 825723 0.88 833083 59 7824 814346 0.95 822170 60 7493 817068 0.91 824561 61 7996 801063 0.99 809059 62 7592 797732 0.94 805324 63 7717 788949 0.97 796666 64 7630 799226 0.95 806856 65 7765 783467 0.98 791232 66 7833 777867 1.00 785700 67 7798 773470 1.00 781268 68 7991 781780 1.01 789771 69 7887 764849 1.02 772736 70 8296 766275 1.07 774571 71 7913 753705 1.04 761618 72 8164 755152 1.07 763316 73 8083 734434 1.09 742517 74 8374 740267 1.12 748641 75 8546 734952 1.15 743498 76 8509 729211 1.15 737720 77 7959 712768 1.10 720727 78 8575 706744 1.20 715319 79 8070 696039 1.15 704109 80 8673 701074 1.22 709747 81 8207 679188 1.19 687395 82 8426 681402 1.22 689828 83 8111 669720 1.20 677831 84 8323 663479 1.24 671802 85 8160 653623 1.23 661783 86 8442 647695 1.29 656137 87 7909 634535 1.23 642444 88 8235 632694 1.28 640929 89 8008 613030 1.29 621038 90 7865 612889 1.27 620754 91 8261 608028 1.34 616289 92 7928 604895 1.29 612823 93 8095 587597 1.36 595692 94 7728 579910 1.32 587638 95 7877 574287 1.35 582164 96 7859 577393 1.34 585252 97 8119 567227 1.41 575346 98 7737 561537 1.36 569274 99 7923 555971 1.41 563894 100 7711 550835 1.38 558546 101 7794 530907 1.45 538701 102 7593 532616 1.41 540209 103 7844 514348 1.50 522192 104 7480 522903 1.41 530383 105 7395 500370 1.46 507765 106 7382 498937 1.46 506319 107 7373 494878 1.47 502251 108 7188 486073 1.46 493261 109 7170 475147 1.49 482317 110 7102 466492 1.50 473594 111 7154 457675 1.54 464829 112 7334 458231 1.58 465565 113 6859 442920 1.52 449779 114 6853 439259 1.54 446112 115 6847 434161 1.55 441008 116 6766 432094 1.54 438860 117 6477 418896 1.52 425373 118 6829 411580 1.63 418409 119 6462 404898 1.57 411360 120 6870 405175 1.67 412045 121 6483 397001 1.61 403484 122 6551 392941 1.64 399492 123 6307 380829 1.63 387136 124 6483 381197 1.67 387680 125 6361 370331 1.69 376692 126 6305 366362 1.69 372667 127 6151 358127 1.69 364278 128 5956 354193 1.65 360149 129 5780 341978 1.66 347758 130 5950 339106 1.72 345056 131 5982 333125 1.76 339107 132 5852 330033 1.74 335885 133 5733 318731 1.77 324464 134 5733 313194 1.80 318927 135 5666 306624 1.81 312290 136 5658 311321 1.78 316979 137 5458 297628 1.80 303086 138 5537 292446 1.86 297983 139 5788 289428 1.96 295216 140 5699 288530 1.94 294229 141 5907 283751 2.04 289658 142 6214 280072 2.17 286286 143 6266 270098 2.27 276364 144 6311 258177 2.39 264488 145 4800 130991 3.53 135791 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 147935 2184906 6.34 2332841 2 130659 2496902 4.97 2627561 3 121103 2472306 4.67 2593409 4 94619 2371339 3.84 2465958 5 82828 2272365 3.52 2355193 6 83040 2244245 3.57 2327285 7 74048 2195368 3.26 2269416 8 69864 2183521 3.10 2253385 9 68375 2161969 3.07 2230344 10 67729 2168135 3.03 2235864 11 68881 2199817 3.04 2268698 12 60844 2146573 2.76 2207417 13 57067 2115322 2.63 2172389 14 60533 2149670 2.74 2210203 15 61196 2141743 2.78 2202939 16 58771 2131202 2.68 2189973 17 55832 2107608 2.58 2163440 18 54982 2113441 2.54 2168423 19 52088 2113082 2.41 2165170 20 53670 2119794 2.47 2173464 21 50572 2156234 2.29 2206806 22 53475 2143547 2.43 2197022 23 48255 2158197 2.19 2206452 24 52896 2146475 2.41 2199371 25 45975 2156168 2.09 2202143 26 51845 2161720 2.34 2213565 27 45776 2195367 2.04 2241143 28 49874 2185659 2.23 2235533 29 44349 2184376 1.99 2228725 30 50051 2196066 2.23 2246117 31 42052 2191546 1.88 2233598 32 48726 2220448 2.15 2269174 33 41908 2216732 1.86 2258640 34 47763 2209610 2.12 2257373 35 41244 2222469 1.82 2263713 36 47200 2211125 2.09 2258325 37 40329 2184788 1.81 2225117 38 46163 2194633 2.06 2240796 39 41527 2210174 1.84 2251701 40 45271 2185122 2.03 2230393 41 42174 2196584 1.88 2238758 42 46327 2205229 2.06 2251556 43 41779 2186577 1.87 2228356 44 45990 2180285 2.07 2226275 45 43168 2181872 1.94 2225040 46 45159 2172081 2.04 2217240 47 43279 2177635 1.95 2220914 48 45046 2179130 2.03 2224176 49 43818 2160571 1.99 2204389 50 44505 2152967 2.03 2197472 51 44140 2147350 2.01 2191490 52 44154 2154405 2.01 2198559 53 44224 2138843 2.03 2183067 54 45067 2130341 2.07 2175408 55 43250 2123461 2.00 2166711 56 43776 2114047 2.03 2157823 57 43764 2097375 2.04 2141139 58 43657 2081996 2.05 2125653 59 43845 2099161 2.05 2143006 60 44493 2097681 2.08 2142174 61 43135 2067493 2.04 2110628 62 45527 2048424 2.17 2093951 63 43287 2036617 2.08 2079904 64 45195 2022003 2.19 2067198 65 42641 2009076 2.08 2051717 66 46024 2007909 2.24 2053933 67 41740 1983260 2.06 2025000 68 44783 1968045 2.22 2012828 69 43064 1959632 2.15 2002696 70 45418 1935964 2.29 1981382 71 41725 1918891 2.13 1960616 72 44879 1891804 2.32 1936683 73 40766 1873261 2.13 1914027 74 44983 1852760 2.37 1897743 75 41191 1842863 2.19 1884054 76 43939 1825224 2.35 1869163 77 41098 1801989 2.23 1843087 78 44143 1793994 2.40 1838137 79 40665 1776585 2.24 1817250 80 43250 1765570 2.39 1808820 81 40534 1731071 2.29 1771605 82 43367 1705786 2.48 1749153 83 39561 1694485 2.28 1734046 84 43053 1687633 2.49 1730686 85 39300 1665229 2.31 1704529 86 41445 1654209 2.44 1695654 87 39815 1643396 2.37 1683211 88 40598 1603554 2.47 1644152 89 39766 1583931 2.45 1623697 90 40490 1577828 2.50 1618318 91 37721 1547231 2.38 1584952 92 39201 1534211 2.49 1573412 93 38314 1518273 2.46 1556587 94 38758 1484210 2.54 1522968 95 37026 1469423 2.46 1506449 96 37752 1454587 2.53 1492339 97 36190 1433807 2.46 1469997 98 36994 1414930 2.55 1451924 99 36154 1400112 2.52 1436266 100 35343 1373776 2.51 1409119 101 35222 1359415 2.53 1394637 102 36119 1343117 2.62 1379236 103 33622 1319766 2.48 1353388 104 34602 1301750 2.59 1336352 105 33469 1282766 2.54 1316235 106 33855 1268543 2.60 1302398 107 32731 1244402 2.56 1277133 108 33428 1229426 2.65 1262854 109 31983 1217363 2.56 1249346 110 32812 1192645 2.68 1225457 111 31222 1178594 2.58 1209816 112 32065 1165425 2.68 1197490 113 30604 1142388 2.61 1172992 114 32188 1129779 2.77 1161967 115 29377 1105992 2.59 1135369 116 30927 1093612 2.75 1124539 117 29520 1078572 2.66 1108092 118 29606 1060252 2.72 1089858 119 28903 1050541 2.68 1079444 120 29235 1036605 2.74 1065840 121 27475 1013081 2.64 1040556 122 28676 993132 2.81 1021808 123 26951 981716 2.67 1008667 124 27476 960651 2.78 988127 125 26213 949282 2.69 975495 126 27471 930879 2.87 958350 127 25547 917348 2.71 942895 128 25874 907103 2.77 932977 129 25644 894190 2.79 919834 130 25440 875320 2.82 900760 131 24776 861420 2.80 886196 132 24836 854675 2.82 879511 133 24241 845189 2.79 869430 134 24687 829195 2.89 853882 135 23543 808647 2.83 832190 136 23367 797262 2.85 820629 137 23440 785992 2.90 809432 138 23382 774369 2.93 797751 139 22874 762807 2.91 785681 140 23230 748357 3.01 771587 141 23500 737145 3.09 760645 142 23988 726869 3.19 750857 143 23472 711408 3.19 734880 144 21643 678032 3.09 699675 145 15944 344400 4.42 360344 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 43289 30320 58.81 73609 2 41930 27458 60.43 69388 3 47817 25898 64.87 73715 4 49714 24589 66.91 74303 5 50301 22180 69.40 72481 6 56132 20647 73.11 76779 7 63469 20251 75.81 83720 8 59246 19189 75.54 78435 9 52538 19526 72.90 72064 10 51294 18984 72.99 70278 11 51742 19355 72.78 71097 12 49399 19291 71.92 68690 13 49633 17749 73.66 67382 14 49515 16746 74.73 66261 15 50491 16780 75.06 67271 16 49835 16488 75.14 66323 17 48721 16203 75.04 64924 18 48989 16136 75.22 65125 19 47269 15704 75.06 62973 20 44569 14685 75.22 59254 21 46450 14578 76.11 61028 22 44960 14299 75.87 59259 23 44751 14165 75.96 58916 24 42551 13494 75.92 56045 25 43044 13315 76.37 56359 26 41103 12920 76.08 54023 27 41211 12738 76.39 53949 28 41215 12738 76.39 53953 29 40577 12392 76.61 52969 30 40158 12185 76.72 52343 31 38942 11881 76.62 50823 32 37919 11167 77.25 49086 33 37555 11354 76.79 48909 34 36904 11098 76.88 48002 35 36176 10917 76.82 47093 36 35249 10688 76.73 45937 37 34264 10234 77.00 44498 38 33707 9744 77.57 43451 39 33426 9649 77.60 43075 40 32151 9450 77.28 41601 41 33220 9401 77.94 42621 42 30972 8973 77.54 39945 43 31543 9274 77.28 40817 44 30032 8868 77.20 38900 45 29849 8605 77.62 38454 46 29207 8223 78.03 37430 47 29542 8349 77.97 37891 48 28999 8313 77.72 37312 49 27798 8026 77.60 35824 50 26762 7798 77.44 34560 51 26602 7828 77.26 34430 52 25994 7407 77.82 33401 53 25667 7422 77.57 33089 54 25275 7313 77.56 32588 55 24488 7221 77.23 31709 56 24203 6949 77.69 31152 57 23520 6934 77.23 30454 58 23364 6845 77.34 30209 59 23250 6698 77.63 29948 60 22353 6535 77.38 28888 61 22504 6443 77.74 28947 62 21798 6385 77.34 28183 63 21953 6247 77.85 28200 64 20369 6062 77.06 26431 65 19894 5886 77.17 25780 66 19998 5958 77.05 25956 67 19705 5951 76.80 25656 68 19241 5601 77.45 24842 69 19142 5487 77.72 24629 70 18756 5301 77.96 24057 71 18349 5173 78.01 23522 72 18330 5337 77.45 23667 73 17579 5163 77.30 22742 74 17786 5083 77.77 22869 75 17597 4845 78.41 22442 76 16730 4856 77.50 21586 77 17082 4779 78.14 21861 78 16912 4669 78.37 21581 79 15958 4627 77.52 20585 80 16236 4412 78.63 20648 81 15209 4402 77.55 19611 82 15010 4306 77.71 19316 83 14886 4295 77.61 19181 84 14387 4376 76.68 18763 85 14432 4094 77.90 18526 86 14046 4057 77.59 18103 87 13817 4035 77.40 17852 88 13544 4026 77.09 17570 89 13921 3899 78.12 17820 90 13457 3854 77.74 17311 91 13009 3668 78.01 16677 92 13208 3874 77.32 17082 93 12611 3574 77.92 16185 94 12359 3571 77.58 15930 95 12277 3439 78.12 15716 96 12088 3419 77.95 15507 97 11875 3377 77.86 15252 98 11635 3209 78.38 14844 99 11339 3295 77.48 14634 100 11525 3144 78.57 14669 101 10948 3209 77.33 14157 102 10755 3067 77.81 13822 103 10685 3036 77.87 13721 104 10419 3055 77.33 13474 105 10410 2975 77.77 13385 106 10340 2860 78.33 13200 107 9971 2930 77.29 12901 108 9775 2828 77.56 12603 109 9433 2791 77.17 12224 110 9315 2720 77.40 12035 111 9260 2768 76.99 12028 112 9065 2617 77.60 11682 113 8674 2515 77.52 11189 114 8731 2612 76.97 11343 115 8642 2551 77.21 11193 116 8528 2476 77.50 11004 117 8246 2384 77.57 10630 118 8119 2371 77.40 10490 119 8098 2447 76.79 10545 120 7845 2186 78.21 10031 121 7430 2156 77.51 9586 122 7628 2163 77.91 9791 123 7436 2279 76.54 9715 124 7409 2108 77.85 9517 125 7165 2210 76.43 9375 126 7170 2104 77.31 9274 127 6764 2075 76.52 8839 128 6756 2019 76.99 8775 129 6782 1987 77.34 8769 130 6521 1977 76.74 8498 131 6751 1861 78.39 8612 132 6223 1839 77.19 8062 133 6224 1869 76.91 8093 134 6064 1834 76.78 7898 135 6123 1899 76.33 8022 136 5774 1776 76.48 7550 137 5756 1646 77.76 7402 138 5596 1731 76.38 7327 139 5589 1696 76.72 7285 140 5414 1666 76.47 7080 141 5254 1675 75.83 6929 142 5291 1535 77.51 6826 143 5163 1536 77.07 6699 144 5034 1474 77.35 6508 145 3974 695 85.11 4669 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14833 346243 4.11 361076 2 12805 233321 5.20 246126 3 10652 213504 4.75 224156 4 7225 211768 3.30 218993 5 11455 208915 5.20 220370 6 17942 201405 8.18 219347 7 6508 203257 3.10 209765 8 6133 200919 2.96 207052 9 4554 198739 2.24 203293 10 4963 195110 2.48 200073 11 6802 194341 3.38 201143 12 3875 200361 1.90 204236 13 4055 185376 2.14 189431 14 3530 183365 1.89 186895 15 3590 179221 1.96 182811 16 3199 179258 1.75 182457 17 3028 173689 1.71 176717 18 2612 174775 1.47 177387 19 2543 170599 1.47 173142 20 2386 172146 1.37 174532 21 2226 166985 1.32 169211 22 2017 162229 1.23 164246 23 2001 161810 1.22 163811 24 1917 159124 1.19 161041 25 1624 155845 1.03 157469 26 1659 157256 1.04 158915 27 1487 148931 0.99 150418 28 1511 149038 1.00 150549 29 1375 148284 0.92 149659 30 1448 146128 0.98 147576 31 1211 139885 0.86 141096 32 1409 141012 0.99 142421 33 1169 137168 0.85 138337 34 1250 136899 0.90 138149 35 1057 135379 0.77 136436 36 1303 135338 0.95 136641 37 959 127768 0.74 128727 38 1170 129275 0.90 130445 39 920 124787 0.73 125707 40 1060 123814 0.85 124874 41 902 119505 0.75 120407 42 932 120350 0.77 121282 43 924 116439 0.79 117363 44 917 115154 0.79 116071 45 893 111644 0.79 112537 46 782 111359 0.70 112141 47 834 108496 0.76 109330 48 809 106921 0.75 107730 49 841 103862 0.80 104703 50 795 104277 0.76 105072 51 812 99803 0.81 100615 52 690 99825 0.69 100515 53 846 97893 0.86 98739 54 736 95765 0.76 96501 55 764 93246 0.81 94010 56 696 94760 0.73 95456 57 767 89263 0.85 90030 58 686 89873 0.76 90559 59 764 86722 0.87 87486 60 639 86823 0.73 87462 61 732 85550 0.85 86282 62 642 83763 0.76 84405 63 696 80759 0.85 81455 64 654 81417 0.80 82071 65 633 78376 0.80 79009 66 651 77389 0.83 78040 67 585 76567 0.76 77152 68 637 76464 0.83 77101 69 580 73609 0.78 74189 70 648 73649 0.87 74297 71 593 71989 0.82 72582 72 609 71768 0.84 72377 73 555 69599 0.79 70154 74 588 68466 0.85 69054 75 560 67012 0.83 67572 76 594 66292 0.89 66886 77 518 64590 0.80 65108 78 591 63958 0.92 64549 79 556 61983 0.89 62539 80 555 62695 0.88 63250 81 496 60820 0.81 61316 82 625 60249 1.03 60874 83 469 57972 0.80 58441 84 553 57887 0.95 58440 85 485 56137 0.86 56622 86 465 56380 0.82 56845 87 476 54552 0.87 55028 88 496 54481 0.90 54977 89 446 52477 0.84 52923 90 513 52335 0.97 52848 91 444 52622 0.84 53066 92 453 51263 0.88 51716 93 478 49119 0.96 49597 94 434 49030 0.88 49464 95 445 48276 0.91 48721 96 441 48304 0.90 48745 97 441 46579 0.94 47020 98 412 45898 0.89 46310 99 417 45258 0.91 45675 100 403 45621 0.88 46024 101 409 43826 0.92 44235 102 411 43463 0.94 43874 103 372 41625 0.89 41997 104 356 42429 0.83 42785 105 360 39914 0.89 40274 106 365 40517 0.89 40882 107 357 39908 0.89 40265 108 349 38923 0.89 39272 109 348 37872 0.91 38220 110 321 37252 0.85 37573 111 354 36962 0.95 37316 112 364 36881 0.98 37245 113 278 35356 0.78 35634 114 337 35339 0.94 35676 115 321 34630 0.92 34951 116 318 34470 0.91 34788 117 301 33242 0.90 33543 118 315 32905 0.95 33220 119 279 32113 0.86 32392 120 289 32151 0.89 32440 121 306 31053 0.98 31359 122 296 31147 0.94 31443 123 235 30053 0.78 30288 124 295 30850 0.95 31145 125 285 29437 0.96 29722 126 274 29247 0.93 29521 127 295 28675 1.02 28970 128 267 28231 0.94 28498 129 231 27589 0.83 27820 130 272 27180 0.99 27452 131 211 26721 0.78 26932 132 256 26634 0.95 26890 133 215 25616 0.83 25831 134 224 25466 0.87 25690 135 224 24590 0.90 24814 136 238 24917 0.95 25155 137 235 24028 0.97 24263 138 210 23727 0.88 23937 139 201 23612 0.84 23813 140 221 23111 0.95 23332 141 210 22817 0.91 23027 142 228 22234 1.02 22462 143 217 21555 1.00 21772 144 197 20447 0.95 20644 145 151 9810 1.52 9961 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 62940 612873 9.31 675813 2 48752 692358 6.58 741110 3 48480 660618 6.84 709098 4 32310 629183 4.88 661493 5 28438 592313 4.58 620751 6 30434 569956 5.07 600390 7 27399 545870 4.78 573269 8 23796 540828 4.21 564624 9 22269 531548 4.02 553817 10 24127 526321 4.38 550448 11 26829 516851 4.93 543680 12 19339 505874 3.68 525213 13 18181 488342 3.59 506523 14 18401 487722 3.64 506123 15 17941 483501 3.58 501442 16 17074 469115 3.51 486189 17 15615 461033 3.28 476648 18 15074 453099 3.22 468173 19 13700 447054 2.97 460754 20 13904 441684 3.05 455588 21 12977 446680 2.82 459657 22 12824 434262 2.87 447086 23 11558 428873 2.62 440431 24 12389 421361 2.86 433750 25 10391 417696 2.43 428087 26 11439 409932 2.71 421371 27 9934 409522 2.37 419456 28 10472 404177 2.53 414649 29 9079 396716 2.24 405795 30 9882 390569 2.47 400451 31 8148 385392 2.07 393540 32 9148 383455 2.33 392603 33 7792 379292 2.01 387084 34 8630 373138 2.26 381768 35 7189 366740 1.92 373929 36 8076 356863 2.21 364939 37 6753 348524 1.90 355277 38 7818 347017 2.20 354835 39 6643 341566 1.91 348209 40 7364 333304 2.16 340668 41 6597 329692 1.96 336289 42 7490 323830 2.26 331320 43 6212 315784 1.93 321996 44 7304 309665 2.30 316969 45 6269 306529 2.00 312798 46 6772 300089 2.21 306861 47 6297 296644 2.08 302941 48 6666 293597 2.22 300263 49 6081 286725 2.08 292806 50 6314 280643 2.20 286957 51 5909 277241 2.09 283150 52 6022 276126 2.13 282148 53 5862 270149 2.12 276011 54 6218 264842 2.29 271060 55 5449 259586 2.06 265035 56 5723 256945 2.18 262668 57 5448 253049 2.11 258497 58 5513 246680 2.19 252193 59 5423 245680 2.16 251103 60 5484 242438 2.21 247922 61 5078 237770 2.09 242848 62 5487 230831 2.32 236318 63 4974 227638 2.14 232612 64 5373 226747 2.31 232120 65 4815 222236 2.12 227051 66 5386 218727 2.40 224113 67 4804 216503 2.17 221307 68 5064 211301 2.34 216365 69 4844 208022 2.28 212866 70 5038 204240 2.41 209278 71 4423 201146 2.15 205569 72 4896 198973 2.40 203869 73 4199 193231 2.13 197430 74 4913 190903 2.51 195816 75 4175 189296 2.16 193471 76 4683 186160 2.45 190843 77 4125 182813 2.21 186938 78 4629 178706 2.52 183335 79 4005 177274 2.21 181279 80 4398 175512 2.44 179910 81 3923 172312 2.23 176235 82 4395 167903 2.55 172298 83 3670 166454 2.16 170124 84 4258 164689 2.52 168947 85 3670 162160 2.21 165830 86 4075 159714 2.49 163789 87 3643 159593 2.23 163236 88 3806 155219 2.39 159025 89 3693 152116 2.37 155809 90 3861 150198 2.51 154059 91 3376 148016 2.23 151392 92 3647 146066 2.44 149713 93 3346 144674 2.26 148020 94 3539 141096 2.45 144635 95 3237 138895 2.28 142132 96 3379 136591 2.41 139970 97 3215 134544 2.33 137759 98 3222 133739 2.35 136961 99 3079 130566 2.30 133645 100 3076 128113 2.34 131189 101 2922 126101 2.26 129023 102 3095 124862 2.42 127957 103 2865 122267 2.29 125132 104 2979 121388 2.40 124367 105 2783 119066 2.28 121849 106 2879 116755 2.41 119634 107 2650 115058 2.25 117708 108 2821 113653 2.42 116474 109 2608 112114 2.27 114722 110 2650 109800 2.36 112450 111 2518 108853 2.26 111371 112 2551 107329 2.32 109880 113 2457 105495 2.28 107952 114 2656 103388 2.50 106044 115 2267 100596 2.20 102863 116 2432 100492 2.36 102924 117 2245 98767 2.22 101012 118 2426 96905 2.44 99331 119 2121 96043 2.16 98164 120 2419 95629 2.47 98048 121 2124 92901 2.24 95025 122 2219 91742 2.36 93961 123 2013 90211 2.18 92224 124 2163 88544 2.38 90707 125 1928 87244 2.16 89172 126 2087 86104 2.37 88191 127 1808 84190 2.10 85998 128 1968 83702 2.30 85670 129 1925 82659 2.28 84584 130 1866 81090 2.25 82956 131 1811 79560 2.23 81371 132 1931 78170 2.41 80101 133 1769 77077 2.24 78846 134 1858 76139 2.38 77997 135 1633 74871 2.13 76504 136 1724 73969 2.28 75693 137 1596 72964 2.14 74560 138 1687 71074 2.32 72761 139 1558 70477 2.16 72035 140 1602 69087 2.27 70689 141 1580 67946 2.27 69526 142 1605 66787 2.35 68392 143 1408 65942 2.09 67350 144 1351 61681 2.14 63032 145 926 30084 2.99 31010