CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 215592 112127 65.79 327719 2 211250 103508 67.12 314758 3 234822 105889 68.92 340711 4 257761 103145 71.42 360906 5 260039 99223 72.38 359262 6 294430 96312 75.35 390742 7 314784 95727 76.68 410511 8 299307 93196 76.26 392503 9 299760 94421 76.05 394181 10 292385 93374 75.79 385759 11 296722 94630 75.82 391352 12 295800 92844 76.11 388644 13 299971 95139 75.92 395110 14 302039 92359 76.58 394398 15 317558 95352 76.91 412910 16 317081 93841 77.16 410922 17 324109 94438 77.44 418547 18 328117 96257 77.32 424374 19 318526 94324 77.15 412850 20 304666 90626 77.07 395292 21 319659 93469 77.38 413128 22 316576 93512 77.20 410088 23 314708 93022 77.19 407730 24 312851 92396 77.20 405247 25 317832 94849 77.02 412681 26 309364 90815 77.31 400179 27 310824 91517 77.25 402341 28 330969 95292 77.64 426261 29 316856 91547 77.58 408403 30 317284 92248 77.47 409532 31 315927 92203 77.41 408130 32 322226 92840 77.63 415066 33 321814 94047 77.38 415861 34 320394 92397 77.62 412791 35 317149 92040 77.51 409189 36 317418 90810 77.76 408228 37 313208 90530 77.58 403738 38 318853 92664 77.48 411517 39 316168 90479 77.75 406647 40 306220 88687 77.54 394907 41 311524 89721 77.64 401245 42 307134 88699 77.59 395833 43 311970 90038 77.60 402008 44 305334 87629 77.70 392963 45 305617 87505 77.74 393122 46 301042 88862 77.21 389904 47 305759 86083 78.03 391842 48 303942 86190 77.91 390132 49 301068 86153 77.75 387221 50 291853 85038 77.44 376891 51 298311 85120 77.80 383431 52 293546 84246 77.70 377792 53 295442 84790 77.70 380232 54 292341 84153 77.65 376494 55 288729 83290 77.61 372019 56 286101 82291 77.66 368392 57 286117 82525 77.61 368642 58 289699 82369 77.86 372068 59 281987 81205 77.64 363192 60 278299 81151 77.42 359450 61 274129 80328 77.34 354457 62 268024 78649 77.31 346673 63 272531 79292 77.46 351823 64 258958 76451 77.21 335409 65 255192 76443 76.95 331635 66 255402 77675 76.68 333077 67 253546 75010 77.17 328556 68 255870 73883 77.59 329753 69 252555 73551 77.45 326106 70 239959 70624 77.26 310583 71 238339 69793 77.35 308132 72 238026 70137 77.24 308163 73 235584 69976 77.10 305560 74 232954 68361 77.31 301315 75 231076 67376 77.42 298452 76 227762 67369 77.17 295131 77 228895 66418 77.51 295313 78 221274 65325 77.21 286599 79 214108 64807 76.76 278915 80 211127 63149 76.98 274276 81 203571 61868 76.69 265439 82 201065 60440 76.89 261505 83 198784 59812 76.87 258596 84 195964 58914 76.89 254878 85 192581 58192 76.79 250773 86 193574 57211 77.19 250785 87 186171 56443 76.74 242614 88 185667 55563 76.97 241230 89 185308 55558 76.93 240866 90 178568 54104 76.75 232672 91 174611 52633 76.84 227244 92 171829 51746 76.86 223575 93 164554 50448 76.54 215002 94 164663 50113 76.67 214776 95 163074 49062 76.87 212136 96 158599 48784 76.48 207383 97 155190 47723 76.48 202913 98 151288 46202 76.61 197490 99 148374 46151 76.28 194525 100 146093 44198 76.77 190291 101 143151 43607 76.65 186758 102 141340 43350 76.53 184690 103 141082 43425 76.46 184507 104 135733 41684 76.51 177417 105 134146 41427 76.40 175573 106 132780 40512 76.62 173292 107 129415 39389 76.67 168804 108 127125 39515 76.29 166640 109 122361 38092 76.26 160453 110 119007 37245 76.16 156252 111 119155 37128 76.24 156283 112 116050 36308 76.17 152358 113 110925 35753 75.62 146678 114 109680 34929 75.85 144609 115 109337 34240 76.15 143577 116 108420 33960 76.15 142380 117 104099 32930 75.97 137029 118 98828 32263 75.39 131091 119 97600 31737 75.46 129337 120 94448 30813 75.40 125261 121 93609 30384 75.50 123993 122 92560 29920 75.57 122480 123 91538 29440 75.66 120978 124 89829 29165 75.49 118994 125 86354 28175 75.40 114529 126 84842 27923 75.24 112765 127 81535 27013 75.11 108548 128 78860 26250 75.03 105110 129 77679 25914 74.98 103593 130 76503 25552 74.96 102055 131 75801 24970 75.22 100771 132 74210 24318 75.32 98528 133 72250 24307 74.83 96557 134 69484 23423 74.79 92907 135 68192 23249 74.57 91441 136 67076 22455 74.92 89531 137 65332 22328 74.53 87660 138 63116 22008 74.15 85124 139 62376 21591 74.29 83967 140 60802 21471 73.90 82273 141 59612 21045 73.91 80657 142 58986 21113 73.64 80099 143 57897 20764 73.60 78661 144 56053 19158 74.53 75211 145 47336 9516 83.26 56852 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 35714 1376870 2.53 1412584 2 30230 943929 3.10 974159 3 23863 918702 2.53 942565 4 17390 931135 1.83 948525 5 20551 934223 2.15 954774 6 27103 931700 2.83 958803 7 14855 938284 1.56 953139 8 14352 960283 1.47 974635 9 12588 936899 1.33 949487 10 11723 961898 1.20 973621 11 14318 985789 1.43 1000107 12 10388 996873 1.03 1007261 13 12697 969473 1.29 982170 14 9811 958488 1.01 968299 15 11683 984192 1.17 995875 16 9277 992209 0.93 1001486 17 9335 959667 0.96 969002 18 8238 997071 0.82 1005309 19 8515 990300 0.85 998815 20 8046 1003456 0.80 1011502 21 8112 979837 0.82 987949 22 7985 983756 0.81 991741 23 7634 984255 0.77 991889 24 7513 981911 0.76 989424 25 7078 980187 0.72 987265 26 7433 1024110 0.72 1031543 27 6553 968316 0.67 974869 28 7375 981469 0.75 988844 29 6704 985569 0.68 992273 30 7538 979651 0.76 987189 31 6565 976226 0.67 982791 32 7770 990104 0.78 997874 33 6588 979642 0.67 986230 34 8013 974423 0.82 982436 35 6419 974097 0.65 980516 36 8002 997364 0.80 1005366 37 6790 975925 0.69 982715 38 7800 976406 0.79 984206 39 6744 963149 0.70 969893 40 7649 965033 0.79 972682 41 7121 968602 0.73 975723 42 7566 979691 0.77 987257 43 7359 985607 0.74 992966 44 7569 983523 0.76 991092 45 7609 966377 0.78 973986 46 7689 966262 0.79 973951 47 7848 945033 0.82 952881 48 7634 952927 0.79 960561 49 8095 951955 0.84 960050 50 7677 951475 0.80 959152 51 8827 929531 0.94 938358 52 8135 938550 0.86 946685 53 8708 940515 0.92 949223 54 8126 914120 0.88 922246 55 9063 907407 0.99 916470 56 8247 904439 0.90 912686 57 9107 880395 1.02 889502 58 8555 892675 0.95 901230 59 9212 879335 1.04 888547 60 8582 873828 0.97 882410 61 9235 854131 1.07 863366 62 8769 845388 1.03 854157 63 9139 838325 1.08 847464 64 8821 841010 1.04 849831 65 9076 830274 1.08 839350 66 9067 817528 1.10 826595 67 9025 809674 1.10 818699 68 9392 813573 1.14 822965 69 9206 792126 1.15 801332 70 9435 794161 1.17 803596 71 9281 772379 1.19 781660 72 9482 770813 1.22 780295 73 9049 749029 1.19 758078 74 9756 758484 1.27 768240 75 9812 749530 1.29 759342 76 9781 730664 1.32 740445 77 9063 714409 1.25 723472 78 9593 705206 1.34 714799 79 9132 693204 1.30 702336 80 9502 694594 1.35 704096 81 9017 671032 1.33 680049 82 9250 663485 1.37 672735 83 8937 656061 1.34 664998 84 9405 643499 1.44 652904 85 9098 632322 1.42 641420 86 9003 622828 1.42 631831 87 8790 604264 1.43 613054 88 8881 600285 1.46 609166 89 8598 582134 1.46 590732 90 8735 580112 1.48 588847 91 8910 571822 1.53 580732 92 8563 561020 1.50 569583 93 8305 546970 1.50 555275 94 8240 537498 1.51 545738 95 8408 528421 1.57 536829 96 8120 529601 1.51 537721 97 8407 514915 1.61 523322 98 7987 509909 1.54 517896 99 8151 504335 1.59 512486 100 8053 494763 1.60 502816 101 7895 472841 1.64 480736 102 7847 469916 1.64 477763 103 7544 455715 1.63 463259 104 7520 459630 1.61 467150 105 7463 441021 1.66 448484 106 7227 434123 1.64 441350 107 7283 430759 1.66 438042 108 7275 420401 1.70 427676 109 6914 407674 1.67 414588 110 6766 400124 1.66 406890 111 6877 389622 1.73 396499 112 6952 389015 1.76 395967 113 6670 372059 1.76 378729 114 6746 368032 1.80 374778 115 6325 364587 1.71 370912 116 6531 359593 1.78 366124 117 6261 346944 1.77 353205 118 6359 340142 1.84 346501 119 6126 333619 1.80 339745 120 6248 332508 1.84 338756 121 6083 323691 1.84 329774 122 6158 319567 1.89 325725 123 5918 305331 1.90 311249 124 6123 304085 1.97 310208 125 5762 295835 1.91 301597 126 5698 290791 1.92 296489 127 5560 283247 1.93 288807 128 5508 275912 1.96 281420 129 5216 264874 1.93 270090 130 5347 263078 1.99 268425 131 5103 258892 1.93 263995 132 5088 252423 1.98 257511 133 4845 243735 1.95 248580 134 4903 237158 2.03 242061 135 4905 230297 2.09 235202 136 4874 233094 2.05 237968 137 4749 223317 2.08 228066 138 4823 218746 2.16 223569 139 4850 212498 2.23 217348 140 4903 212241 2.26 217144 141 5160 209806 2.40 214966 142 5269 205694 2.50 210963 143 5567 196291 2.76 201858 144 5354 187666 2.77 193020 145 4071 98240 3.98 102311 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 158323 2518927 5.91 2677250 2 140277 2829227 4.72 2969504 3 129102 2807716 4.40 2936818 4 102286 2694203 3.66 2796489 5 91562 2586434 3.42 2677996 6 87311 2556935 3.30 2644246 7 79206 2494854 3.08 2574060 8 71830 2481640 2.81 2553470 9 71902 2442927 2.86 2514829 10 66916 2456824 2.65 2523740 11 69473 2494889 2.71 2564362 12 60119 2423537 2.42 2483656 13 58978 2382442 2.42 2441420 14 58282 2411032 2.36 2469314 15 60083 2391626 2.45 2451709 16 56334 2389274 2.30 2445608 17 56897 2360355 2.35 2417252 18 55047 2378641 2.26 2433688 19 53939 2361895 2.23 2415834 20 54444 2365162 2.25 2419606 21 52186 2393720 2.13 2445906 22 54382 2389275 2.23 2443657 23 49924 2405521 2.03 2455445 24 53993 2396550 2.20 2450543 25 48093 2404453 1.96 2452546 26 53869 2420661 2.18 2474530 27 47373 2453586 1.89 2500959 28 52267 2440226 2.10 2492493 29 46246 2438789 1.86 2485035 30 52054 2455786 2.08 2507840 31 43997 2441250 1.77 2485247 32 50817 2489432 2.00 2540249 33 43472 2483591 1.72 2527063 34 49869 2458975 1.99 2508844 35 42681 2479564 1.69 2522245 36 48937 2459717 1.95 2508654 37 42548 2436029 1.72 2478577 38 48855 2440418 1.96 2489273 39 44017 2455016 1.76 2499033 40 47120 2441232 1.89 2488352 41 44865 2446830 1.80 2491695 42 49060 2447952 1.96 2497012 43 45407 2429498 1.83 2474905 44 48445 2434772 1.95 2483217 45 46721 2422485 1.89 2469206 46 47910 2409130 1.95 2457040 47 47170 2404881 1.92 2452051 48 47812 2412814 1.94 2460626 49 47711 2387847 1.96 2435558 50 47908 2380776 1.97 2428684 51 47959 2368194 1.98 2416153 52 47203 2356345 1.96 2403548 53 48025 2344546 2.01 2392571 54 48068 2326850 2.02 2374918 55 47131 2315466 1.99 2362597 56 47559 2292466 2.03 2340025 57 47815 2272891 2.06 2320706 58 47553 2240517 2.08 2288070 59 47726 2258358 2.07 2306084 60 48237 2254623 2.09 2302860 61 47678 2213510 2.11 2261188 62 50419 2176851 2.26 2227270 63 47779 2161567 2.16 2209346 64 48953 2142603 2.23 2191556 65 46164 2123939 2.13 2170103 66 49777 2108581 2.31 2158358 67 45598 2072344 2.15 2117942 68 49115 2053745 2.34 2102860 69 46126 2042406 2.21 2088532 70 49137 2010335 2.39 2059472 71 44908 1977845 2.22 2022753 72 48940 1934281 2.47 1983221 73 44273 1911638 2.26 1955911 74 48402 1891691 2.49 1940093 75 44485 1867015 2.33 1911500 76 48224 1844628 2.55 1892852 77 44023 1808012 2.38 1852035 78 47532 1790451 2.59 1837983 79 43336 1771353 2.39 1814689 80 46547 1745778 2.60 1792325 81 43313 1705024 2.48 1748337 82 45381 1668893 2.65 1714274 83 42179 1649473 2.49 1691652 84 45298 1634366 2.70 1679664 85 42020 1611046 2.54 1653066 86 43173 1591054 2.64 1634227 87 41909 1566550 2.61 1608459 88 41766 1516936 2.68 1558702 89 40820 1492315 2.66 1533135 90 41223 1479807 2.71 1521030 91 39565 1443794 2.67 1483359 92 39886 1423791 2.73 1463677 93 39092 1401141 2.71 1440233 94 38657 1370182 2.74 1408839 95 37707 1356074 2.71 1393781 96 37413 1325752 2.74 1363165 97 36706 1302206 2.74 1338912 98 37129 1282342 2.81 1319471 99 36037 1266282 2.77 1302319 100 34866 1234206 2.75 1269072 101 34541 1210849 2.77 1245390 102 34774 1187677 2.84 1222451 103 33177 1155539 2.79 1188716 104 33623 1134891 2.88 1168514 105 32095 1111740 2.81 1143835 106 32521 1093160 2.89 1125681 107 30874 1071361 2.80 1102235 108 31426 1052650 2.90 1084076 109 30055 1041002 2.81 1071057 110 31005 1015182 2.96 1046187 111 29185 996717 2.84 1025902 112 29720 977544 2.95 1007264 113 27919 955746 2.84 983665 114 29275 941487 3.02 970762 115 26968 917110 2.86 944078 116 28344 901441 3.05 929785 117 26498 885931 2.90 912429 118 27090 864390 3.04 891480 119 26054 852950 2.96 879004 120 26654 835747 3.09 862401 121 24624 813653 2.94 838277 122 25379 795817 3.09 821196 123 23899 783403 2.96 807302 124 24163 760119 3.08 784282 125 23065 746161 3.00 769226 126 23360 728958 3.11 752318 127 22302 717636 3.01 739938 128 22314 705807 3.06 728121 129 22145 692979 3.10 715124 130 21975 676526 3.15 698501 131 20913 659746 3.07 680659 132 21080 652318 3.13 673398 133 20220 640399 3.06 660619 134 20534 625470 3.18 646004 135 19871 610757 3.15 630628 136 19570 596265 3.18 615835 137 19514 586296 3.22 605810 138 19308 570788 3.27 590096 139 19056 560279 3.29 579335 140 19595 549491 3.44 569086 141 19168 538626 3.44 557794 142 19948 527953 3.64 547901 143 19291 515285 3.61 534576 144 18169 487507 3.59 505676 145 13732 253715 5.13 267447 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 32274 24007 57.34 56281 2 31272 20927 59.91 52199 3 34763 19665 63.87 54428 4 37027 18421 66.78 55448 5 36475 16693 68.60 53168 6 41202 15624 72.51 56826 7 45737 14705 75.67 60442 8 43574 14189 75.44 57763 9 37819 14073 72.88 51892 10 37301 13912 72.84 51213 11 37390 13939 72.84 51329 12 35310 14021 71.58 49331 13 35670 12622 73.86 48292 14 35165 11903 74.71 47068 15 35637 12201 74.50 47838 16 34465 11607 74.81 46072 17 33825 11505 74.62 45330 18 34673 11412 75.24 46085 19 32266 10852 74.83 43118 20 30539 9956 75.41 40495 21 31210 10066 75.61 41276 22 30672 9593 76.18 40265 23 30108 9670 75.69 39778 24 28904 9286 75.68 38190 25 29585 9289 76.10 38874 26 27271 8515 76.21 35786 27 27124 8446 76.26 35570 28 27312 8355 76.57 35667 29 27028 8251 76.61 35279 30 26055 8007 76.49 34062 31 25149 7516 76.99 32665 32 24913 7601 76.62 32514 33 24255 7500 76.38 31755 34 23594 7022 77.06 30616 35 22823 6948 76.66 29771 36 22255 6693 76.88 28948 37 21981 6554 77.03 28535 38 21162 6322 77.00 27484 39 21005 6141 77.38 27146 40 19811 6111 76.43 25922 41 20395 5986 77.31 26381 42 19136 5704 77.04 24840 43 19219 5791 76.85 25010 44 19164 5544 77.56 24708 45 18394 5328 77.54 23722 46 17347 5125 77.19 22472 47 17557 5080 77.56 22637 48 17370 4941 77.85 22311 49 16760 4852 77.55 21612 50 16104 4654 77.58 20758 51 15676 4628 77.21 20304 52 15300 4435 77.53 19735 53 15187 4428 77.43 19615 54 14788 4391 77.11 19179 55 14391 4303 76.98 18694 56 13886 4207 76.75 18093 57 14076 4153 77.22 18229 58 13703 3991 77.44 17694 59 13415 3975 77.14 17390 60 12943 3791 77.35 16734 61 12894 3800 77.24 16694 62 12691 3732 77.28 16423 63 12562 3619 77.63 16181 64 11718 3601 76.49 15319 65 11232 3475 76.37 14707 66 11357 3356 77.19 14713 67 11120 3359 76.80 14479 68 11023 3231 77.33 14254 69 10794 3202 77.12 13996 70 10390 3024 77.46 13414 71 10464 3031 77.54 13495 72 9980 2951 77.18 12931 73 10012 2993 76.99 13005 74 9734 2856 77.32 12590 75 9503 2706 77.84 12209 76 9193 2695 77.33 11888 77 9277 2715 77.36 11992 78 9250 2722 77.26 11972 79 8827 2535 77.69 11362 80 8727 2479 77.88 11206 81 8158 2495 76.58 10653 82 8180 2415 77.21 10595 83 7762 2368 76.62 10130 84 7916 2287 77.59 10203 85 7597 2260 77.07 9857 86 7701 2260 77.31 9961 87 7359 2072 78.03 9431 88 7296 2105 77.61 9401 89 7381 2074 78.06 9455 90 7014 1970 78.07 8984 91 6911 1971 77.81 8882 92 6698 1961 77.35 8659 93 6384 1909 76.98 8293 94 6356 1824 77.70 8180 95 6320 1940 76.51 8260 96 6195 1877 76.75 8072 97 6009 1813 76.82 7822 98 6066 1790 77.21 7856 99 6070 1667 78.45 7737 100 5912 1743 77.23 7655 101 5606 1684 76.90 7290 102 5322 1586 77.04 6908 103 5575 1660 77.06 7235 104 5126 1561 76.66 6687 105 5249 1488 77.91 6737 106 5300 1574 77.10 6874 107 5268 1457 78.33 6725 108 5096 1411 78.32 6507 109 4739 1428 76.84 6167 110 4792 1489 76.29 6281 111 4482 1398 76.22 5880 112 4537 1343 77.16 5880 113 4254 1243 77.39 5497 114 4369 1305 77.00 5674 115 4223 1286 76.66 5509 116 4244 1198 77.99 5442 117 4091 1229 76.90 5320 118 3975 1228 76.40 5203 119 3933 1152 77.35 5085 120 3754 1141 76.69 4895 121 3850 1203 76.19 5053 122 3683 1112 76.81 4795 123 3539 1097 76.34 4636 124 3602 1091 76.75 4693 125 3634 1098 76.80 4732 126 3323 1010 76.69 4333 127 3309 1043 76.03 4352 128 3204 941 77.30 4145 129 3184 1010 75.92 4194 130 3173 982 76.37 4155 131 3153 943 76.98 4096 132 3065 955 76.24 4020 133 2950 906 76.50 3856 134 2936 933 75.89 3869 135 2861 897 76.13 3758 136 2820 855 76.73 3675 137 2725 821 76.85 3546 138 2696 824 76.59 3520 139 2574 799 76.31 3373 140 2546 822 75.59 3368 141 2587 729 78.02 3316 142 2331 745 75.78 3076 143 2376 812 74.53 3188 144 2219 737 75.07 2956 145 1714 313 84.56 2027 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 11049 245188 4.31 256237 2 9363 164520 5.38 173883 3 7743 150637 4.89 158380 4 5202 146277 3.43 151479 5 7557 143509 5.00 151066 6 11112 138326 7.44 149438 7 4363 139554 3.03 143917 8 3975 136589 2.83 140564 9 3247 133801 2.37 137048 10 3490 132580 2.56 136070 11 4679 130836 3.45 135515 12 2516 136302 1.81 138818 13 3025 122427 2.41 125452 14 2306 121589 1.86 123895 15 2646 118135 2.19 120781 16 2062 118341 1.71 120403 17 2124 113885 1.83 116009 18 1737 112424 1.52 114161 19 1789 111822 1.57 113611 20 1445 110465 1.29 111910 21 1455 107224 1.34 108679 22 1339 104459 1.27 105798 23 1251 103861 1.19 105112 24 1293 101018 1.26 102311 25 1077 98994 1.08 100071 26 1093 100244 1.08 101337 27 948 94076 1.00 95024 28 1012 92992 1.08 94004 29 795 92466 0.85 93261 30 956 90264 1.05 91220 31 716 87983 0.81 88699 32 945 87580 1.07 88525 33 629 84360 0.74 84989 34 949 83497 1.12 84446 35 674 82795 0.81 83469 36 860 82946 1.03 83806 37 603 77694 0.77 78297 38 781 77476 1.00 78257 39 565 74965 0.75 75530 40 770 73771 1.03 74541 41 588 71499 0.82 72087 42 632 70877 0.88 71509 43 547 68853 0.79 69400 44 579 68500 0.84 69079 45 565 65720 0.85 66285 46 550 66020 0.83 66570 47 545 64223 0.84 64768 48 490 64137 0.76 64627 49 557 60382 0.91 60939 50 466 60370 0.77 60836 51 558 57506 0.96 58064 52 454 57527 0.78 57981 53 545 56275 0.96 56820 54 424 55008 0.76 55432 55 559 53270 1.04 53829 56 420 53395 0.78 53815 57 549 50104 1.08 50653 58 424 50272 0.84 50696 59 526 48763 1.07 49289 60 381 48603 0.78 48984 61 498 47421 1.04 47919 62 430 46508 0.92 46938 63 491 45850 1.06 46341 64 390 45346 0.85 45736 65 417 43263 0.95 43680 66 363 42905 0.84 43268 67 384 41547 0.92 41931 68 416 41783 0.99 42199 69 406 40168 1.00 40574 70 419 40161 1.03 40580 71 357 39416 0.90 39773 72 441 39017 1.12 39458 73 391 37397 1.03 37788 74 413 37082 1.10 37495 75 358 35908 0.99 36266 76 378 35599 1.05 35977 77 324 34531 0.93 34855 78 415 34132 1.20 34547 79 318 32953 0.96 33271 80 385 33587 1.13 33972 81 330 31539 1.04 31869 82 358 31491 1.12 31849 83 307 30526 1.00 30833 84 353 30363 1.15 30716 85 255 29559 0.86 29814 86 312 29397 1.05 29709 87 278 28493 0.97 28771 88 303 28451 1.05 28754 89 297 27027 1.09 27324 90 314 27144 1.14 27458 91 308 27540 1.11 27848 92 282 26335 1.06 26617 93 294 25279 1.15 25573 94 272 24793 1.09 25065 95 276 24253 1.13 24529 96 243 24462 0.98 24705 97 307 23505 1.29 23812 98 270 23136 1.15 23406 99 266 22757 1.16 23023 100 214 22830 0.93 23044 101 241 22141 1.08 22382 102 210 21616 0.96 21826 103 262 21060 1.23 21322 104 236 21602 1.08 21838 105 231 20007 1.14 20238 106 186 20105 0.92 20291 107 244 19684 1.22 19928 108 186 19669 0.94 19855 109 206 19106 1.07 19312 110 194 18559 1.03 18753 111 170 18337 0.92 18507 112 199 18027 1.09 18226 113 186 17224 1.07 17410 114 164 17285 0.94 17449 115 174 17084 1.01 17258 116 193 16950 1.13 17143 117 176 16424 1.06 16600 118 173 15916 1.08 16089 119 147 15590 0.93 15737 120 169 15850 1.05 16019 121 140 15198 0.91 15338 122 173 15156 1.13 15329 123 179 14410 1.23 14589 124 170 14846 1.13 15016 125 145 14028 1.02 14173 126 174 13967 1.23 14141 127 128 13575 0.93 13703 128 151 13686 1.09 13837 129 124 13214 0.93 13338 130 130 12916 1.00 13046 131 119 13027 0.91 13146 132 148 12624 1.16 12772 133 138 12329 1.11 12467 134 136 12017 1.12 12153 135 122 11540 1.05 11662 136 129 11694 1.09 11823 137 125 11321 1.09 11446 138 112 11137 1.00 11249 139 100 11111 0.89 11211 140 114 10980 1.03 11094 141 117 10725 1.08 10842 142 119 10475 1.12 10594 143 95 9958 0.94 10053 144 115 9301 1.22 9416 145 84 4430 1.86 4514 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 46704 445206 9.49 491910 2 36749 491432 6.96 528181 3 35729 465870 7.12 501599 4 24889 440555 5.35 465444 5 22480 414713 5.14 437193 6 22561 399746 5.34 422307 7 20783 377992 5.21 398775 8 17302 373656 4.43 390958 9 17198 364350 4.51 381548 10 17293 359398 4.59 376691 11 19056 352240 5.13 371296 12 13672 342194 3.84 355866 13 13229 329847 3.86 343076 14 13045 325048 3.86 338093 15 12619 321782 3.77 334401 16 11895 310415 3.69 322310 17 11415 304566 3.61 315981 18 11047 298689 3.57 309736 19 10254 291300 3.40 301554 20 10399 288558 3.48 298957 21 9289 286127 3.14 295416 22 9783 278893 3.39 288676 23 8441 274402 2.98 282843 24 9249 268955 3.32 278204 25 7769 265486 2.84 273255 26 8621 259492 3.22 268113 27 7278 259717 2.73 266995 28 8136 254380 3.10 262516 29 6631 247776 2.61 254407 30 7533 243676 3.00 251209 31 5866 238401 2.40 244267 32 6962 238996 2.83 245958 33 5672 234821 2.36 240493 34 6608 229616 2.80 236224 35 5189 223956 2.26 229145 36 6237 216328 2.80 222565 37 5187 209922 2.41 215109 38 5953 209189 2.77 215142 39 5179 205364 2.46 210543 40 5580 199928 2.72 205508 41 5018 196979 2.48 201997 42 5717 191929 2.89 197646 43 4818 187277 2.51 192095 44 5476 182314 2.92 187790 45 5037 180291 2.72 185328 46 5144 174125 2.87 179269 47 4976 171913 2.81 176889 48 5073 169125 2.91 174198 49 4849 167179 2.82 172028 50 4888 161503 2.94 166391 51 4621 159927 2.81 164548 52 4639 159022 2.83 163661 53 4727 154986 2.96 159713 54 4603 150374 2.97 154977 55 4435 146763 2.93 151198 56 4329 144402 2.91 148731 57 4398 141229 3.02 145627 58 4256 138271 2.99 142527 59 4267 138064 3.00 142331 60 4294 135718 3.07 140012 61 3957 131908 2.91 135865 62 4287 127655 3.25 131942 63 3882 125764 2.99 129646 64 4223 124629 3.28 128852 65 3813 122204 3.03 126017 66 4318 120074 3.47 124392 67 3500 117662 2.89 121162 68 4071 115038 3.42 119109 69 3486 112238 3.01 115724 70 3978 111226 3.45 115204 71 3294 108420 2.95 111714 72 4003 106401 3.63 110404 73 3182 103863 2.97 107045 74 3903 102002 3.69 105905 75 3141 100946 3.02 104087 76 3708 99107 3.61 102815 77 3145 97012 3.14 100157 78 3654 94762 3.71 98416 79 2992 92986 3.12 95978 80 3409 92327 3.56 95736 81 3056 89680 3.30 92736 82 3273 87239 3.62 90512 83 2899 86647 3.24 89546 84 3247 85481 3.66 88728 85 2859 83338 3.32 86197 86 2969 82488 3.47 85457 87 2896 81997 3.41 84893 88 2900 79401 3.52 82301 89 2856 78053 3.53 80909 90 2934 76706 3.68 79640 91 2621 75344 3.36 77965 92 2584 74469 3.35 77053 93 2630 73484 3.46 76114 94 2609 71531 3.52 74140 95 2527 70279 3.47 72806 96 2436 68950 3.41 71386 97 2434 67345 3.49 69779 98 2356 66060 3.44 68416 99 2355 65726 3.46 68081 100 2284 64045 3.44 66329 101 2305 63102 3.52 65407 102 2299 61939 3.58 64238 103 2107 60806 3.35 62913 104 2100 59960 3.38 62060 105 2089 58492 3.45 60581 106 2035 57533 3.42 59568 107 1944 56640 3.32 58584 108 2015 55425 3.51 57440 109 1798 55241 3.15 57039 110 1947 53711 3.50 55658 111 1731 52880 3.17 54611 112 1837 52520 3.38 54357 113 1688 51135 3.20 52823 114 1879 49724 3.64 51603 115 1547 48978 3.06 50525 116 1741 48799 3.44 50540 117 1585 47397 3.24 48982 118 1647 46685 3.41 48332 119 1539 46505 3.20 48044 120 1673 45419 3.55 47092 121 1394 44682 3.03 46076 122 1531 43519 3.40 45050 123 1363 43121 3.06 44484 124 1476 42274 3.37 43750 125 1301 41628 3.03 42929 126 1473 40819 3.48 42292 127 1296 39993 3.14 41289 128 1341 39523 3.28 40864 129 1217 39099 3.02 40316 130 1235 38123 3.14 39358 131 1187 37178 3.09 38365 132 1231 36987 3.22 38218 133 1147 36590 3.04 37737 134 1183 35764 3.20 36947 135 1111 34868 3.09 35979 136 1103 34165 3.13 35268 137 1079 33998 3.08 35077 138 1152 33095 3.36 34247 139 1083 32686 3.21 33769 140 1056 32122 3.18 33178 141 1011 31603 3.10 32614 142 1028 31092 3.20 32120 143 949 30402 3.03 31351 144 837 28341 2.87 29178 145 661 13538 4.66 14199