16C_26psu_4_S16_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 16899080 lines in total Total number of methylation call strings processed: 33798160 Final Cytosine Methylation Report ================================= Total number of C's analysed: 394455706 Total methylated C's in CpG context: 29091998 Total methylated C's in CHG context: 1169895 Total methylated C's in CHH context: 7243313 Total C to T conversions in CpG context: 8809754 Total C to T conversions in CHG context: 98856327 Total C to T conversions in CHH context: 249284419 C methylated in CpG context: 76.8% C methylated in CHG context: 1.2% C methylated in CHH context: 2.8%