CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 175936 91864 65.70 267800 2 174591 83988 67.52 258579 3 198367 86400 69.66 284767 4 210163 83612 71.54 293775 5 212477 81005 72.40 293482 6 242121 77673 75.71 319794 7 259530 77790 76.94 337320 8 247076 75504 76.59 322580 9 252293 77487 76.50 329780 10 239816 75917 75.96 315733 11 245858 77433 76.05 323291 12 243178 75124 76.40 318302 13 245153 77543 75.97 322696 14 247858 74833 76.81 322691 15 257972 77297 76.94 335269 16 260450 76193 77.37 336643 17 262191 76748 77.36 338939 18 266191 77365 77.48 343556 19 261055 76657 77.30 337712 20 250142 73147 77.37 323289 21 262500 75645 77.63 338145 22 258506 74792 77.56 333298 23 260152 75563 77.49 335715 24 254814 74650 77.34 329464 25 260515 76364 77.33 336879 26 253582 73421 77.55 327003 27 254969 73531 77.62 328500 28 269139 76479 77.87 345618 29 258634 74503 77.64 333137 30 260008 74590 77.71 334598 31 258949 73708 77.84 332657 32 261811 73689 78.04 335500 33 264168 75912 77.68 340080 34 262272 74392 77.90 336664 35 259894 74434 77.74 334328 36 258328 73774 77.79 332102 37 258802 73815 77.81 332617 38 260356 74445 77.76 334801 39 260898 72785 78.19 333683 40 250586 71418 77.82 322004 41 257729 72484 78.05 330213 42 251399 71459 77.87 322858 43 257545 72818 77.96 330363 44 249258 71675 77.67 320933 45 251989 71606 77.87 323595 46 248609 72514 77.42 321123 47 253287 70928 78.12 324215 48 252905 70648 78.16 323553 49 249263 70640 77.92 319903 50 243435 69372 77.82 312807 51 247380 69974 77.95 317354 52 242945 68496 78.01 311441 53 246368 69560 77.98 315928 54 244427 68741 78.05 313168 55 241257 69057 77.75 310314 56 239241 67123 78.09 306364 57 240436 67875 77.98 308311 58 242282 68042 78.07 310324 59 235536 67044 77.84 302580 60 233167 66951 77.69 300118 61 232591 66517 77.76 299108 62 226574 65122 77.67 291696 63 231099 66116 77.75 297215 64 220836 64235 77.47 285071 65 219141 63821 77.45 282962 66 216147 64766 76.94 280913 67 214364 63196 77.23 277560 68 218122 62869 77.63 280991 69 216223 62300 77.63 278523 70 207940 59770 77.67 267710 71 205998 59812 77.50 265810 72 206312 60085 77.45 266397 73 205233 60213 77.32 265446 74 203095 58382 77.67 261477 75 202859 57992 77.77 260851 76 198995 57696 77.52 256691 77 200616 57568 77.70 258184 78 193510 56653 77.35 250163 79 190650 55292 77.52 245942 80 188831 54909 77.47 243740 81 180815 54099 76.97 234914 82 179657 52747 77.30 232404 83 177988 53486 76.89 231474 84 175595 52928 76.84 228523 85 174161 52497 76.84 226658 86 173245 50973 77.27 224218 87 168900 50635 76.94 219535 88 169455 50187 77.15 219642 89 169367 49727 77.30 219094 90 164557 48254 77.33 212811 91 161902 48039 77.12 209941 92 159902 47508 77.09 207410 93 152921 46336 76.75 199257 94 154265 46077 77.00 200342 95 151166 45291 76.95 196457 96 148685 44936 76.79 193621 97 146088 43812 76.93 189900 98 144707 43092 77.05 187799 99 141154 42524 76.85 183678 100 138398 41606 76.89 180004 101 135675 41083 76.76 176758 102 134173 40325 76.89 174498 103 135145 41383 76.56 176528 104 129355 39777 76.48 169132 105 129743 39146 76.82 168889 106 128344 38463 76.94 166807 107 124561 37855 76.69 162416 108 123855 37827 76.60 161682 109 118682 36924 76.27 155606 110 117112 36159 76.41 153271 111 116831 36066 76.41 152897 112 115124 35273 76.55 150397 113 109817 34476 76.11 144293 114 109394 34286 76.14 143680 115 108614 33691 76.32 142305 116 106485 32902 76.40 139387 117 103680 32414 76.18 136094 118 100720 31847 75.98 132567 119 99320 31360 76.00 130680 120 96258 30393 76.00 126651 121 94444 30321 75.70 124765 122 93074 30175 75.52 123249 123 93862 29319 76.20 123181 124 91947 29242 75.87 121189 125 89475 28487 75.85 117962 126 87429 27917 75.80 115346 127 84217 27517 75.37 111734 128 81093 26606 75.30 107699 129 81007 26367 75.44 107374 130 79796 26553 75.03 106349 131 80195 25735 75.71 105930 132 77823 25273 75.49 103096 133 75755 24942 75.23 100697 134 73500 23958 75.42 97458 135 72692 24264 74.97 96956 136 71313 23305 75.37 94618 137 69330 23059 75.04 92389 138 67838 22779 74.86 90617 139 67657 22468 75.07 90125 140 65777 22376 74.62 88153 141 64964 22256 74.48 87220 142 64068 22104 74.35 86172 143 62768 21660 74.35 84428 144 61319 20231 75.19 81550 145 51607 9613 84.30 61220 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 27487 1223196 2.20 1250683 2 24336 816066 2.90 840402 3 19168 778385 2.40 797553 4 14419 796590 1.78 811009 5 17624 787866 2.19 805490 6 24411 787090 3.01 811501 7 12982 791900 1.61 804882 8 13391 806963 1.63 820354 9 10701 790662 1.34 801363 10 10353 816195 1.25 826548 11 12398 828682 1.47 841080 12 9419 843292 1.10 852711 13 10465 819613 1.26 830078 14 8829 812556 1.07 821385 15 10204 831624 1.21 841828 16 8487 839122 1.00 847609 17 8354 811716 1.02 820070 18 7486 837901 0.89 845387 19 7420 835701 0.88 843121 20 7374 846412 0.86 853786 21 6890 829731 0.82 836621 22 6885 836397 0.82 843282 23 6696 836457 0.79 843153 24 6806 832249 0.81 839055 25 6268 831758 0.75 838026 26 6620 861929 0.76 868549 27 5894 816706 0.72 822600 28 6431 831466 0.77 837897 29 5963 833694 0.71 839657 30 6513 832394 0.78 838907 31 5959 821946 0.72 827905 32 6627 842706 0.78 849333 33 5684 829132 0.68 834816 34 6745 833871 0.80 840616 35 5744 826138 0.69 831882 36 6527 850577 0.76 857104 37 5648 825560 0.68 831208 38 6499 833052 0.77 839551 39 5635 819056 0.68 824691 40 6303 829373 0.75 835676 41 5823 823468 0.70 829291 42 6048 834108 0.72 840156 43 6022 838647 0.71 844669 44 6168 835783 0.73 841951 45 6075 822833 0.73 828908 46 6244 827255 0.75 833499 47 6072 804782 0.75 810854 48 6074 810936 0.74 817010 49 6491 807688 0.80 814179 50 6308 817015 0.77 823323 51 6744 791336 0.85 798080 52 6410 804955 0.79 811365 53 6745 803223 0.83 809968 54 6237 784831 0.79 791068 55 6859 776013 0.88 782872 56 6438 782432 0.82 788870 57 6924 756986 0.91 763910 58 6544 772025 0.84 778569 59 7140 758432 0.93 765572 60 6569 761967 0.85 768536 61 7114 746184 0.94 753298 62 6681 742329 0.89 749010 63 6876 734537 0.93 741413 64 6836 738990 0.92 745826 65 6874 726804 0.94 733678 66 6738 720420 0.93 727158 67 6827 714104 0.95 720931 68 6939 722776 0.95 729715 69 6761 703273 0.95 710034 70 7087 705376 0.99 712463 71 6923 689370 0.99 696293 72 7293 694831 1.04 702124 73 6918 671224 1.02 678142 74 7353 680721 1.07 688074 75 7390 670672 1.09 678062 76 7167 665646 1.07 672813 77 6878 651443 1.04 658321 78 7211 643453 1.11 650664 79 7017 634790 1.09 641807 80 7246 637250 1.12 644496 81 6848 616615 1.10 623463 82 7185 618523 1.15 625708 83 6982 605499 1.14 612481 84 7036 598486 1.16 605522 85 6794 585928 1.15 592722 86 6960 582439 1.18 589399 87 6700 568294 1.17 574994 88 6660 569272 1.16 575932 89 6920 547828 1.25 554748 90 6590 550339 1.18 556929 91 6807 543596 1.24 550403 92 6465 539489 1.18 545954 93 6444 521809 1.22 528253 94 6314 516139 1.21 522453 95 6390 509255 1.24 515645 96 6493 512262 1.25 518755 97 6335 500662 1.25 506997 98 6217 495420 1.24 501637 99 6535 492415 1.31 498950 100 6180 487189 1.25 493369 101 6450 466704 1.36 473154 102 6112 465731 1.30 471843 103 6186 451139 1.35 457325 104 5907 460216 1.27 466123 105 5842 437195 1.32 443037 106 5956 437285 1.34 443241 107 5945 430984 1.36 436929 108 5655 422994 1.32 428649 109 5734 412696 1.37 418430 110 5654 407387 1.37 413041 111 5508 397263 1.37 402771 112 5587 398854 1.38 404441 113 5286 382084 1.36 387370 114 5710 379525 1.48 385235 115 5465 374247 1.44 379712 116 5411 372656 1.43 378067 117 5325 361540 1.45 366865 118 5211 353503 1.45 358714 119 5116 347760 1.45 352876 120 5214 348882 1.47 354096 121 5200 339580 1.51 344780 122 5130 335371 1.51 340501 123 4992 323098 1.52 328090 124 5202 324897 1.58 330099 125 4973 314775 1.56 319748 126 5019 311627 1.59 316646 127 4670 303330 1.52 308000 128 4609 299328 1.52 303937 129 4589 287678 1.57 292267 130 4513 284912 1.56 289425 131 4628 280808 1.62 285436 132 4553 277528 1.61 282081 133 4434 266886 1.63 271320 134 4569 261182 1.72 265751 135 4429 254547 1.71 258976 136 4406 259606 1.67 264012 137 4331 247969 1.72 252300 138 4384 243318 1.77 247702 139 4406 239793 1.80 244199 140 4486 238667 1.84 243153 141 4790 234941 2.00 239731 142 4828 232468 2.03 237296 143 5051 222603 2.22 227654 144 4910 212811 2.26 217721 145 3799 107253 3.42 111052 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 128116 2093332 5.77 2221448 2 118623 2385670 4.74 2504293 3 108361 2363515 4.38 2471876 4 91757 2260443 3.90 2352200 5 82351 2168793 3.66 2251144 6 82539 2148706 3.70 2231245 7 74931 2098751 3.45 2173682 8 71940 2094986 3.32 2166926 9 70817 2066342 3.31 2137159 10 70292 2070678 3.28 2140970 11 69153 2103884 3.18 2173037 12 65587 2054737 3.09 2120324 13 60176 2022115 2.89 2082291 14 64218 2051079 3.04 2115297 15 63185 2045978 3.00 2109163 16 62669 2032357 2.99 2095026 17 59684 2009062 2.89 2068746 18 61247 2013530 2.95 2074777 19 55739 2010365 2.70 2066104 20 59544 2003106 2.89 2062650 21 55187 2041943 2.63 2097130 22 59205 2026789 2.84 2085994 23 53211 2044488 2.54 2097699 24 59158 2032805 2.83 2091963 25 51036 2035058 2.45 2086094 26 58185 2036688 2.78 2094873 27 50848 2069686 2.40 2120534 28 56619 2062939 2.67 2119558 29 49135 2058526 2.33 2107661 30 56060 2070546 2.64 2126606 31 47246 2060350 2.24 2107596 32 54847 2095396 2.55 2150243 33 47435 2089382 2.22 2136817 34 54088 2074672 2.54 2128760 35 46470 2086289 2.18 2132759 36 53556 2075335 2.52 2128891 37 46159 2049558 2.20 2095717 38 52478 2052015 2.49 2104493 39 47190 2066575 2.23 2113765 40 50522 2043517 2.41 2094039 41 47444 2058229 2.25 2105673 42 52282 2060206 2.47 2112488 43 46864 2046688 2.24 2093552 44 51576 2036843 2.47 2088419 45 48023 2040023 2.30 2088046 46 50397 2022873 2.43 2073270 47 48701 2025514 2.35 2074215 48 49879 2027272 2.40 2077151 49 47410 2006561 2.31 2053971 50 49479 2003194 2.41 2052673 51 48446 1997237 2.37 2045683 52 48548 1995563 2.38 2044111 53 47841 1983505 2.36 2031346 54 49323 1970311 2.44 2019634 55 45855 1963785 2.28 2009640 56 48920 1946390 2.45 1995310 57 46658 1934468 2.36 1981126 58 47648 1910904 2.43 1958552 59 46684 1934156 2.36 1980840 60 47982 1925815 2.43 1973797 61 45313 1897689 2.33 1943002 62 49083 1870749 2.56 1919832 63 45129 1862014 2.37 1907143 64 47833 1847220 2.52 1895053 65 44149 1834688 2.35 1878837 66 48830 1829819 2.60 1878649 67 42815 1805660 2.32 1848475 68 47344 1789983 2.58 1837327 69 43558 1781750 2.39 1825308 70 46609 1758554 2.58 1805163 71 42423 1740792 2.38 1783215 72 46046 1707942 2.63 1753988 73 40884 1688363 2.36 1729247 74 46278 1672636 2.69 1718914 75 40892 1662529 2.40 1703421 76 44447 1640239 2.64 1684686 77 41201 1621066 2.48 1662267 78 44370 1607380 2.69 1651750 79 40162 1591605 2.46 1631767 80 42596 1577271 2.63 1619867 81 39533 1547066 2.49 1586599 82 41776 1515201 2.68 1556977 83 38449 1509204 2.48 1547653 84 41861 1502217 2.71 1544078 85 38074 1482557 2.50 1520631 86 40056 1472127 2.65 1512183 87 38423 1455567 2.57 1493990 88 38599 1416992 2.65 1455591 89 37916 1393614 2.65 1431530 90 38391 1384421 2.70 1422812 91 35872 1359062 2.57 1394934 92 37027 1347694 2.67 1384721 93 35935 1327830 2.63 1363765 94 36246 1301439 2.71 1337685 95 35176 1293423 2.65 1328599 96 35098 1267927 2.69 1303025 97 33837 1248201 2.64 1282038 98 34387 1233321 2.71 1267708 99 33538 1219956 2.68 1253494 100 33283 1194730 2.71 1228013 101 32449 1179295 2.68 1211744 102 33185 1163169 2.77 1196354 103 30604 1138513 2.62 1169117 104 32129 1122877 2.78 1155006 105 30240 1102841 2.67 1133081 106 30876 1085519 2.77 1116395 107 28982 1066394 2.65 1095376 108 30430 1052994 2.81 1083424 109 28556 1041903 2.67 1070459 110 29617 1018148 2.83 1047765 111 27633 1005694 2.67 1033327 112 28652 991538 2.81 1020190 113 26789 968390 2.69 995179 114 28668 958270 2.90 986938 115 25718 937467 2.67 963185 116 27877 924500 2.93 952377 117 25504 911399 2.72 936903 118 26138 894295 2.84 920433 119 25099 882165 2.77 907264 120 26150 869778 2.92 895928 121 23809 849303 2.73 873112 122 25080 833840 2.92 858920 123 23275 820767 2.76 844042 124 24062 802092 2.91 826154 125 22591 787579 2.79 810170 126 23445 774396 2.94 797841 127 21883 764185 2.78 786068 128 22308 750995 2.88 773303 129 22111 741200 2.90 763311 130 21867 721579 2.94 743446 131 21087 712025 2.88 733112 132 21490 702682 2.97 724172 133 20279 693528 2.84 713807 134 20696 679438 2.96 700134 135 19606 664445 2.87 684051 136 19796 653392 2.94 673188 137 19808 643537 2.99 663345 138 20032 630531 3.08 650563 139 19340 621545 3.02 640885 140 19615 608892 3.12 628507 141 19659 598543 3.18 618202 142 20216 587685 3.33 607901 143 19772 574060 3.33 593832 144 17835 547240 3.16 565075 145 13244 274987 4.59 288231 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 35172 23922 59.52 59094 2 34803 21694 61.60 56497 3 39048 20558 65.51 59606 4 40875 19444 67.76 60319 5 41066 18106 69.40 59172 6 45241 17009 72.68 62250 7 49520 16186 75.37 65706 8 48104 15710 75.38 63814 9 42695 15665 73.16 58360 10 42120 15279 73.38 57399 11 42511 15151 73.72 57662 12 40394 14791 73.20 55185 13 39966 14086 73.94 54052 14 41077 13494 75.27 54571 15 40438 13606 74.82 54044 16 40317 13308 75.18 53625 17 39147 13272 74.68 52419 18 39559 12773 75.59 52332 19 38169 12489 75.35 50658 20 35763 11444 75.76 47207 21 36716 11872 75.57 48588 22 36240 11377 76.11 47617 23 36138 11354 76.09 47492 24 33966 10930 75.65 44896 25 34195 10966 75.72 45161 26 33000 10237 76.32 43237 27 32937 10008 76.70 42945 28 32387 9668 77.01 42055 29 32446 9687 77.01 42133 30 31578 9301 77.25 40879 31 30090 9039 76.90 39129 32 29421 8807 76.96 38228 33 29241 8723 77.02 37964 34 28517 8438 77.17 36955 35 27599 8500 76.45 36099 36 27096 8177 76.82 35273 37 26762 7895 77.22 34657 38 26025 7646 77.29 33671 39 26043 7681 77.22 33724 40 24437 7406 76.74 31843 41 25328 7334 77.55 32662 42 23772 7049 77.13 30821 43 24561 7100 77.57 31661 44 23289 6729 77.58 30018 45 22693 6550 77.60 29243 46 21940 6646 76.75 28586 47 22547 6451 77.75 28998 48 21799 6326 77.51 28125 49 21030 6083 77.56 27113 50 19952 5753 77.62 25705 51 20041 5983 77.01 26024 52 19337 5706 77.22 25043 53 19256 5805 76.84 25061 54 18768 5426 77.57 24194 55 18172 5470 76.86 23642 56 17935 5139 77.73 23074 57 17776 5220 77.30 22996 58 17159 5076 77.17 22235 59 16929 5016 77.14 21945 60 16565 4802 77.53 21367 61 16732 4786 77.76 21518 62 16114 4787 77.10 20901 63 16584 4610 78.25 21194 64 15028 4421 77.27 19449 65 14799 4295 77.51 19094 66 14635 4274 77.40 18909 67 14430 4177 77.55 18607 68 14458 4129 77.79 18587 69 14225 4134 77.48 18359 70 13808 4008 77.50 17816 71 13720 3947 77.66 17667 72 13400 3762 78.08 17162 73 13017 3784 77.48 16801 74 12901 3714 77.65 16615 75 12772 3628 77.88 16400 76 12070 3629 76.88 15699 77 12370 3533 77.78 15903 78 12117 3421 77.98 15538 79 11806 3337 77.96 15143 80 11641 3230 78.28 14871 81 11128 3266 77.31 14394 82 10840 3206 77.17 14046 83 10764 3242 76.85 14006 84 10687 3126 77.37 13813 85 10226 2972 77.48 13198 86 10106 2993 77.15 13099 87 10135 2889 77.82 13024 88 10060 2827 78.06 12887 89 9878 2907 77.26 12785 90 9702 2720 78.10 12422 91 9235 2746 77.08 11981 92 9370 2685 77.73 12055 93 9001 2642 77.31 11643 94 8860 2650 76.98 11510 95 8898 2494 78.11 11392 96 8502 2519 77.14 11021 97 8392 2504 77.02 10896 98 8224 2420 77.26 10644 99 8022 2271 77.94 10293 100 8095 2380 77.28 10475 101 7579 2238 77.20 9817 102 7632 2229 77.40 9861 103 7748 2261 77.41 10009 104 7167 2117 77.20 9284 105 7478 2050 78.48 9528 106 7415 2142 77.59 9557 107 7052 2037 77.59 9089 108 6707 1962 77.37 8669 109 6632 1921 77.54 8553 110 6567 1904 77.52 8471 111 6352 1905 76.93 8257 112 6429 1765 78.46 8194 113 6217 1882 76.76 8099 114 6066 1869 76.45 7935 115 6080 1761 77.54 7841 116 5900 1705 77.58 7605 117 5617 1623 77.58 7240 118 5588 1635 77.36 7223 119 5507 1604 77.44 7111 120 5322 1631 76.54 6953 121 5386 1642 76.64 7028 122 5165 1574 76.64 6739 123 5063 1551 76.55 6614 124 5053 1509 77.00 6562 125 4870 1555 75.80 6425 126 4967 1457 77.32 6424 127 4866 1422 77.39 6288 128 4535 1402 76.39 5937 129 4591 1379 76.90 5970 130 4496 1409 76.14 5905 131 4677 1427 76.62 6104 132 4351 1226 78.02 5577 133 4249 1305 76.50 5554 134 4256 1288 76.77 5544 135 4207 1287 76.57 5494 136 4111 1267 76.44 5378 137 3875 1145 77.19 5020 138 3892 1231 75.97 5123 139 3702 1159 76.16 4861 140 3766 1185 76.07 4951 141 3631 1186 75.38 4817 142 3664 1149 76.13 4813 143 3638 1047 77.65 4685 144 3291 1039 76.00 4330 145 2560 502 83.61 3062 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 10045 282493 3.43 292538 2 8780 191598 4.38 200378 3 7264 174468 4.00 181732 4 4849 172202 2.74 177051 5 7074 170026 3.99 177100 6 10397 164254 5.95 174651 7 4246 164587 2.51 168833 8 4206 162230 2.53 166436 9 3311 158582 2.05 161893 10 3316 157304 2.06 160620 11 4497 156116 2.80 160613 12 2741 161726 1.67 164467 13 2976 147434 1.98 150410 14 2421 146845 1.62 149266 15 2883 143023 1.98 145906 16 2239 143237 1.54 145476 17 2168 136987 1.56 139155 18 1979 137224 1.42 139203 19 1876 134135 1.38 136011 20 1760 134870 1.29 136630 21 1643 131752 1.23 133395 22 1594 128077 1.23 129671 23 1515 127005 1.18 128520 24 1350 125010 1.07 126360 25 1244 122114 1.01 123358 26 1253 122898 1.01 124151 27 1092 116450 0.93 117542 28 1116 116098 0.95 117214 29 1011 114752 0.87 115763 30 1068 112987 0.94 114055 31 976 107997 0.90 108973 32 1004 109380 0.91 110384 33 856 106314 0.80 107170 34 999 105018 0.94 106017 35 749 103946 0.72 104695 36 942 104153 0.90 105095 37 715 97387 0.73 98102 38 793 98600 0.80 99393 39 696 95408 0.72 96104 40 801 94178 0.84 94979 41 636 90677 0.70 91313 42 738 91540 0.80 92278 43 650 89054 0.72 89704 44 661 87800 0.75 88461 45 629 84384 0.74 85013 46 683 85213 0.80 85896 47 584 82467 0.70 83051 48 562 80858 0.69 81420 49 672 77386 0.86 78058 50 567 78253 0.72 78820 51 627 74606 0.83 75233 52 568 74964 0.75 75532 53 617 74138 0.83 74755 54 555 71416 0.77 71971 55 563 69930 0.80 70493 56 516 70235 0.73 70751 57 573 66344 0.86 66917 58 512 66472 0.76 66984 59 548 64203 0.85 64751 60 481 64557 0.74 65038 61 599 62887 0.94 63486 62 500 61932 0.80 62432 63 554 59952 0.92 60506 64 484 60646 0.79 61130 65 512 57424 0.88 57936 66 493 57140 0.86 57633 67 461 55778 0.82 56239 68 449 56703 0.79 57152 69 425 53958 0.78 54383 70 477 54563 0.87 55040 71 409 53263 0.76 53672 72 473 52447 0.89 52920 73 417 50490 0.82 50907 74 494 49889 0.98 50383 75 391 49088 0.79 49479 76 482 48815 0.98 49297 77 394 46426 0.84 46820 78 444 46447 0.95 46891 79 374 45255 0.82 45629 80 389 45999 0.84 46388 81 366 43324 0.84 43690 82 415 43562 0.94 43977 83 344 41736 0.82 42080 84 421 42086 0.99 42507 85 327 40426 0.80 40753 86 341 40254 0.84 40595 87 320 39512 0.80 39832 88 319 40221 0.79 40540 89 331 37646 0.87 37977 90 373 37920 0.97 38293 91 345 37464 0.91 37809 92 289 36772 0.78 37061 93 303 35414 0.85 35717 94 282 34985 0.80 35267 95 314 34366 0.91 34680 96 279 34381 0.80 34660 97 309 32835 0.93 33144 98 285 32882 0.86 33167 99 288 32548 0.88 32836 100 278 32191 0.86 32469 101 323 30701 1.04 31024 102 277 30769 0.89 31046 103 239 29786 0.80 30025 104 261 30419 0.85 30680 105 284 28827 0.98 29111 106 254 28488 0.88 28742 107 250 28097 0.88 28347 108 261 27727 0.93 27988 109 253 26639 0.94 26892 110 234 26629 0.87 26863 111 242 26131 0.92 26373 112 213 25759 0.82 25972 113 231 24919 0.92 25150 114 221 25132 0.87 25353 115 216 24455 0.88 24671 116 213 24170 0.87 24383 117 195 23157 0.84 23352 118 227 22913 0.98 23140 119 216 22445 0.95 22661 120 241 22433 1.06 22674 121 199 21921 0.90 22120 122 231 21938 1.04 22169 123 172 21157 0.81 21329 124 179 21558 0.82 21737 125 180 20546 0.87 20726 126 182 20430 0.88 20612 127 152 19620 0.77 19772 128 180 19687 0.91 19867 129 184 19052 0.96 19236 130 190 19056 0.99 19246 131 150 18500 0.80 18650 132 192 18534 1.03 18726 133 140 17868 0.78 18008 134 164 17646 0.92 17810 135 157 16814 0.93 16971 136 136 17441 0.77 17577 137 153 16699 0.91 16852 138 137 16421 0.83 16558 139 157 16394 0.95 16551 140 169 16022 1.04 16191 141 185 15821 1.16 16006 142 152 15633 0.96 15785 143 169 14648 1.14 14817 144 144 14162 1.01 14306 145 114 6462 1.73 6576 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 43405 501455 7.97 544860 2 36306 558611 6.10 594917 3 33986 536021 5.96 570007 4 26077 504622 4.91 530699 5 22750 476446 4.56 499196 6 24542 463594 5.03 488136 7 21746 442165 4.69 463911 8 19841 437782 4.34 457623 9 18852 426762 4.23 445614 10 19720 421259 4.47 440979 11 19998 414120 4.61 434118 12 16667 405168 3.95 421835 13 14966 390573 3.69 405539 14 16187 387510 4.01 403697 15 15062 383453 3.78 398515 16 14930 370354 3.88 385284 17 13629 363710 3.61 377339 18 13815 356623 3.73 370438 19 12216 349808 3.37 362024 20 12759 345216 3.56 357975 21 11619 347334 3.24 358953 22 12046 337069 3.45 349115 23 10448 333109 3.04 343557 24 11723 324495 3.49 336218 25 9512 322594 2.86 332106 26 10690 315324 3.28 326014 27 9068 315538 2.79 324606 28 9989 309946 3.12 319935 29 8438 303526 2.70 311964 30 9429 299932 3.05 309361 31 7784 295119 2.57 302903 32 9094 292099 3.02 301193 33 7561 288783 2.55 296344 34 8546 283075 2.93 291621 35 6978 278372 2.45 285350 36 8408 269818 3.02 278226 37 6579 262363 2.45 268942 38 7932 260719 2.95 268651 39 6550 257967 2.48 264517 40 7262 250833 2.81 258095 41 6384 249173 2.50 255557 42 7455 242333 2.98 249788 43 6044 236467 2.49 242511 44 7223 230953 3.03 238176 45 6183 229123 2.63 235306 46 6884 222906 3.00 229790 47 6011 221216 2.65 227227 48 6762 218378 3.00 225140 49 5817 213879 2.65 219696 50 6417 206780 3.01 213197 51 6017 205651 2.84 211668 52 6079 203622 2.90 209701 53 5689 199042 2.78 204731 54 6282 195532 3.11 201814 55 5269 191142 2.68 196411 56 5963 187684 3.08 193647 57 5361 185615 2.81 190976 58 5737 180634 3.08 186371 59 5256 180281 2.83 185537 60 5677 178075 3.09 183752 61 5006 173278 2.81 178284 62 5585 167844 3.22 173429 63 4925 165964 2.88 170889 64 5394 164670 3.17 170064 65 4693 161295 2.83 165988 66 5500 158224 3.36 163724 67 4423 156932 2.74 161355 68 5207 152295 3.31 157502 69 4617 150408 2.98 155025 70 5071 147435 3.33 152506 71 4323 144185 2.91 148508 72 4916 142206 3.34 147122 73 4151 139518 2.89 143669 74 4880 137630 3.42 142510 75 4096 136046 2.92 140142 76 4692 133840 3.39 138532 77 3963 130810 2.94 134773 78 4750 128596 3.56 133346 79 3752 126890 2.87 130642 80 4416 124922 3.41 129338 81 3792 122162 3.01 125954 82 4204 119254 3.41 123458 83 3606 118436 2.95 122042 84 4316 117430 3.55 121746 85 3527 114891 2.98 118418 86 4094 112978 3.50 117072 87 3495 111926 3.03 115421 88 3800 108960 3.37 112760 89 3431 107096 3.10 110527 90 3779 105965 3.44 109744 91 3097 103853 2.90 106950 92 3564 103397 3.33 106961 93 3206 101734 3.06 104940 94 3417 98382 3.36 101799 95 3117 97259 3.11 100376 96 3326 95020 3.38 98346 97 2989 93738 3.09 96727 98 3175 92807 3.31 95982 99 2894 91457 3.07 94351 100 2935 89343 3.18 92278 101 2855 87831 3.15 90686 102 2932 86582 3.28 89514 103 2492 85348 2.84 87840 104 2892 84404 3.31 87296 105 2545 82202 3.00 84747 106 2745 80843 3.28 83588 107 2484 80032 3.01 82516 108 2698 78536 3.32 81234 109 2315 77919 2.89 80234 110 2552 75735 3.26 78287 111 2211 74609 2.88 76820 112 2511 73229 3.32 75740 113 2216 72504 2.97 74720 114 2456 70466 3.37 72922 115 2087 69342 2.92 71429 116 2345 68679 3.30 71024 117 2048 67741 2.93 69789 118 2189 66440 3.19 68629 119 2001 65911 2.95 67912 120 2060 64883 3.08 66943 121 1905 63078 2.93 64983 122 2060 62332 3.20 64392 123 1799 61518 2.84 63317 124 2056 60487 3.29 62543 125 1668 59542 2.73 61210 126 1959 58317 3.25 60276 127 1670 57237 2.83 58907 128 1832 56694 3.13 58526 129 1701 56114 2.94 57815 130 1716 54440 3.06 56156 131 1553 53827 2.80 55380 132 1703 53084 3.11 54787 133 1510 52487 2.80 53997 134 1683 51611 3.16 53294 135 1548 50292 2.99 51840 136 1553 49192 3.06 50745 137 1417 48847 2.82 50264 138 1549 48128 3.12 49677 139 1393 47806 2.83 49199 140 1493 46512 3.11 48005 141 1344 45442 2.87 46786 142 1415 44662 3.07 46077 143 1235 44234 2.72 45469 144 1217 41142 2.87 42359 145 791 19693 3.86 20484