CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 127468 66866 65.59 194334 2 128308 61712 67.52 190020 3 146040 63214 69.79 209254 4 153707 61144 71.54 214851 5 157033 59403 72.55 216436 6 176298 57302 75.47 233600 7 189189 57379 76.73 246568 8 182184 54933 76.83 237117 9 188035 57519 76.58 245554 10 176428 55823 75.96 232251 11 182665 56727 76.30 239392 12 181172 54954 76.73 236126 13 183439 56760 76.37 240199 14 184819 55823 76.80 240642 15 191104 56922 77.05 248026 16 192255 56535 77.28 248790 17 194406 56585 77.46 250991 18 196886 56569 77.68 253455 19 195043 56241 77.62 251284 20 187136 54485 77.45 241621 21 194160 55961 77.63 250121 22 190922 54798 77.70 245720 23 194510 56966 77.35 251476 24 188045 55135 77.33 243180 25 195088 56932 77.41 252020 26 186958 53220 77.84 240178 27 190867 55181 77.57 246048 28 197981 56260 77.87 254241 29 193414 55215 77.79 248629 30 195951 55087 78.06 251038 31 191342 54265 77.91 245607 32 193705 53618 78.32 247323 33 196278 55315 78.01 251593 34 195409 54398 78.22 249807 35 195041 54931 78.03 249972 36 192982 54229 78.06 247211 37 195253 54437 78.20 249690 38 195025 53808 78.38 248833 39 192446 53810 78.15 246256 40 188291 53305 77.94 241596 41 194604 53423 78.46 248027 42 188724 53075 78.05 241799 43 192919 54618 77.94 247537 44 186969 52426 78.10 239395 45 189892 53402 78.05 243294 46 185132 53071 77.72 238203 47 191272 52487 78.47 243759 48 190432 52583 78.36 243015 49 189603 52170 78.42 241773 50 183767 51403 78.14 235170 51 186248 52275 78.08 238523 52 184118 51146 78.26 235264 53 187382 52834 78.01 240216 54 183282 51270 78.14 234552 55 184376 52341 77.89 236717 56 180647 50817 78.05 231464 57 182072 50540 78.27 232612 58 182720 51187 78.12 233907 59 180414 50346 78.18 230760 60 176316 50164 77.85 226480 61 178336 50601 77.90 228937 62 174237 49750 77.79 223987 63 177901 50131 78.02 228032 64 170084 48914 77.66 218998 65 168455 48677 77.58 217132 66 167192 48831 77.40 216023 67 167272 48047 77.69 215319 68 168892 47620 78.01 216512 69 168130 47524 77.96 215654 70 162795 46318 77.85 209113 71 162168 46338 77.78 208506 72 161051 46142 77.73 207193 73 161694 46217 77.77 207911 74 159970 45613 77.81 205583 75 160278 45225 77.99 205503 76 156170 44711 77.74 200881 77 160490 44842 78.16 205332 78 154864 44091 77.84 198955 79 151216 43855 77.52 195071 80 150372 43027 77.75 193399 81 145628 42349 77.47 187977 82 144683 41203 77.83 185886 83 144276 41920 77.49 186196 84 142791 41919 77.31 184710 85 142557 41767 77.34 184324 86 138983 40261 77.54 179244 87 139262 39847 77.75 179109 88 138170 40109 77.50 178279 89 139074 39355 77.94 178429 90 135855 39050 77.67 174905 91 134074 38367 77.75 172441 92 132410 38125 77.64 170535 93 127911 37677 77.25 165588 94 128876 37185 77.61 166061 95 128143 36886 77.65 165029 96 124793 36406 77.42 161199 97 124142 36584 77.24 160726 98 122601 35287 77.65 157888 99 119921 34988 77.41 154909 100 117228 34310 77.36 151538 101 115125 33536 77.44 148661 102 113805 33499 77.26 147304 103 115697 34438 77.06 150135 104 110902 32756 77.20 143658 105 111675 32518 77.45 144193 106 108683 32551 76.95 141234 107 108586 31926 77.28 140512 108 107411 31544 77.30 138955 109 104541 31330 76.94 135871 110 101856 30404 77.01 132260 111 103060 30623 77.09 133683 112 101127 29831 77.22 130958 113 96478 29458 76.61 125936 114 96441 29330 76.68 125771 115 96440 28939 76.92 125379 116 94774 27892 77.26 122666 117 92582 28131 76.70 120713 118 89924 27255 76.74 117179 119 89678 27643 76.44 117321 120 86604 26894 76.30 113498 121 86140 26637 76.38 112777 122 85434 26225 76.51 111659 123 85355 26275 76.46 111630 124 84741 25650 76.76 110391 125 83149 25340 76.64 108489 126 80384 24452 76.68 104836 127 78084 24531 76.09 102615 128 76965 23787 76.39 100752 129 76458 24425 75.79 100883 130 74364 24027 75.58 98391 131 74513 23697 75.87 98210 132 72767 22427 76.44 95194 133 72942 22874 76.13 95816 134 69435 21932 76.00 91367 135 70417 21980 76.21 92397 136 68553 21511 76.12 90064 137 66132 21036 75.87 87168 138 65779 20711 76.05 86490 139 65628 21006 75.75 86634 140 63967 20214 75.99 84181 141 62952 20685 75.27 83637 142 62417 20352 75.41 82769 143 60848 19873 75.38 80721 144 59723 18579 76.27 78302 145 50096 8572 85.39 58668 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 22841 1038539 2.15 1061380 2 20175 696624 2.81 716799 3 15989 651362 2.40 667351 4 12255 679256 1.77 691511 5 14703 668933 2.15 683636 6 19649 666572 2.86 686221 7 11246 662026 1.67 673272 8 11469 682940 1.65 694409 9 9738 665857 1.44 675595 10 9007 685176 1.30 694183 11 10784 694790 1.53 705574 12 7968 708936 1.11 716904 13 9270 688253 1.33 697523 14 7709 685889 1.11 693598 15 9165 691437 1.31 700602 16 7873 704257 1.11 712130 17 7865 680389 1.14 688254 18 6952 699394 0.98 706346 19 6857 696322 0.98 703179 20 6866 712959 0.95 719825 21 6540 696349 0.93 702889 22 6700 699864 0.95 706564 23 6187 697675 0.88 703862 24 6251 701279 0.88 707530 25 5828 694659 0.83 700487 26 6596 717975 0.91 724571 27 5651 681489 0.82 687140 28 6458 703280 0.91 709738 29 5654 697096 0.80 702750 30 6405 704171 0.90 710576 31 5548 690276 0.80 695824 32 6561 708018 0.92 714579 33 5496 700504 0.78 706000 34 6377 705677 0.90 712054 35 5502 698500 0.78 704002 36 6671 721379 0.92 728050 37 5519 691579 0.79 697098 38 6481 704600 0.91 711081 39 5615 692578 0.80 698193 40 6019 706413 0.84 712432 41 5642 689308 0.81 694950 42 5868 709596 0.82 715464 43 5751 701467 0.81 707218 44 6054 708717 0.85 714771 45 5769 689794 0.83 695563 46 5800 702540 0.82 708340 47 5751 682025 0.84 687776 48 5729 684822 0.83 690551 49 6098 679686 0.89 685784 50 5959 692076 0.85 698035 51 6195 669839 0.92 676034 52 5747 685028 0.83 690775 53 6536 672357 0.96 678893 54 5900 673100 0.87 679000 55 6299 660003 0.95 666302 56 5892 678431 0.86 684323 57 6420 646462 0.98 652882 58 6075 665556 0.90 671631 59 6505 651492 0.99 657997 60 6091 660157 0.91 666248 61 6414 642905 0.99 649319 62 6068 644998 0.93 651066 63 6184 631155 0.97 637339 64 6059 643373 0.93 649432 65 6246 627218 0.99 633464 66 5969 630225 0.94 636194 67 6191 622065 0.99 628256 68 6297 631676 0.99 637973 69 6066 612998 0.98 619064 70 6425 624942 1.02 631367 71 6199 607937 1.01 614136 72 6333 616300 1.02 622633 73 6237 594637 1.04 600874 74 6531 606967 1.06 613498 75 6282 597099 1.04 603381 76 6471 602159 1.06 608630 77 5978 581672 1.02 587650 78 6463 578066 1.11 584529 79 5892 568404 1.03 574296 80 6447 583778 1.09 590225 81 6128 558493 1.09 564621 82 6512 564343 1.14 570855 83 6100 546646 1.10 552746 84 6260 550997 1.12 557257 85 6052 533440 1.12 539492 86 6272 538062 1.15 544334 87 5800 523520 1.10 529320 88 6003 530080 1.12 536083 89 6003 508999 1.17 515002 90 5751 513761 1.11 519512 91 5908 509145 1.15 515053 92 6016 506799 1.17 512815 93 5908 487586 1.20 493494 94 5886 489442 1.19 495328 95 5799 480367 1.19 486166 96 5778 491529 1.16 497307 97 6054 478201 1.25 484255 98 5765 474624 1.20 480389 99 6035 468579 1.27 474614 100 5666 470409 1.19 476075 101 5845 451232 1.28 457077 102 5448 452161 1.19 457609 103 5584 437855 1.26 443439 104 5589 451458 1.22 457047 105 5303 425618 1.23 430921 106 5427 429940 1.25 435367 107 5296 421176 1.24 426472 108 5214 419928 1.23 425142 109 5273 408390 1.27 413663 110 5268 407489 1.28 412757 111 5059 398024 1.26 403083 112 5240 401031 1.29 406271 113 4989 383937 1.28 388926 114 5290 386205 1.35 391495 115 4790 379430 1.25 384220 116 5108 383266 1.32 388374 117 4981 363587 1.35 368568 118 5021 363902 1.36 368923 119 4751 355521 1.32 360272 120 4921 360525 1.35 365446 121 4742 347926 1.34 352668 122 5042 349713 1.42 354755 123 4742 336993 1.39 341735 124 4929 343591 1.41 348520 125 4729 328866 1.42 333595 126 4954 329074 1.48 334028 127 4654 320050 1.43 324704 128 4807 320819 1.48 325626 129 4611 306702 1.48 311313 130 4536 306691 1.46 311227 131 4449 302885 1.45 307334 132 4577 301597 1.49 306174 133 4398 287237 1.51 291635 134 4292 287368 1.47 291660 135 4261 277526 1.51 281787 136 4475 288004 1.53 292479 137 4446 272795 1.60 277241 138 4403 270390 1.60 274793 139 4560 266833 1.68 271393 140 4554 267990 1.67 272544 141 4609 262534 1.73 267143 142 4868 259245 1.84 264113 143 5055 249455 1.99 254510 144 4817 238044 1.98 242861 145 3528 115331 2.97 118859 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 133496 1698141 7.29 1831637 2 132901 1940628 6.41 2073529 3 120033 1918153 5.89 2038186 4 114111 1837861 5.85 1951972 5 102185 1771640 5.45 1873825 6 108711 1754170 5.84 1862881 7 96498 1718608 5.32 1815106 8 101034 1714848 5.56 1815882 9 95025 1703407 5.28 1798432 10 99314 1689555 5.55 1788869 11 92426 1712735 5.12 1805161 12 97403 1673789 5.50 1771192 13 86399 1652551 4.97 1738950 14 95974 1674365 5.42 1770339 15 89498 1664940 5.10 1754438 16 93715 1648128 5.38 1741843 17 88076 1634323 5.11 1722399 18 93947 1630652 5.45 1724599 19 84090 1639811 4.88 1723901 20 91262 1626669 5.31 1717931 21 85376 1665617 4.88 1750993 22 91933 1641339 5.30 1733272 23 81395 1654863 4.69 1736258 24 94441 1652701 5.41 1747142 25 78169 1652215 4.52 1730384 26 93225 1644893 5.36 1738118 27 81068 1673151 4.62 1754219 28 90436 1666514 5.15 1756950 29 79171 1666612 4.53 1745783 30 91677 1670643 5.20 1762320 31 75927 1673155 4.34 1749082 32 90043 1699486 5.03 1789529 33 77120 1691962 4.36 1769082 34 89120 1682098 5.03 1771218 35 76137 1696585 4.29 1772722 36 89047 1684904 5.02 1773951 37 74042 1668575 4.25 1742617 38 87623 1663864 5.00 1751487 39 77785 1681326 4.42 1759111 40 84767 1661098 4.86 1745865 41 77139 1676102 4.40 1753241 42 88245 1678868 4.99 1767113 43 75177 1668872 4.31 1744049 44 86950 1657480 4.98 1744430 45 76778 1663647 4.41 1740425 46 85036 1650198 4.90 1735234 47 77072 1657775 4.44 1734847 48 84129 1648969 4.85 1733098 49 76336 1641608 4.44 1717944 50 82569 1631168 4.82 1713737 51 77680 1637404 4.53 1715084 52 80430 1632992 4.69 1713422 53 75588 1625601 4.44 1701189 54 83439 1616018 4.91 1699457 55 72854 1614628 4.32 1687482 56 79524 1598675 4.74 1678199 57 74003 1596389 4.43 1670392 58 78697 1577854 4.75 1656551 59 73863 1599089 4.42 1672952 60 78463 1587822 4.71 1666285 61 72025 1574555 4.37 1646580 62 78826 1554582 4.83 1633408 63 70957 1550878 4.38 1621835 64 76452 1542877 4.72 1619329 65 68927 1536462 4.29 1605389 66 79191 1531284 4.92 1610475 67 67056 1520323 4.22 1587379 68 75011 1503783 4.75 1578794 69 69977 1498274 4.46 1568251 70 74883 1477930 4.82 1552813 71 66500 1471057 4.33 1537557 72 74268 1450669 4.87 1524937 73 63177 1437287 4.21 1500464 74 73992 1423847 4.94 1497839 75 63341 1420446 4.27 1483787 76 69518 1403224 4.72 1472742 77 63762 1392409 4.38 1456171 78 69597 1379285 4.80 1448882 79 60970 1368833 4.26 1429803 80 66895 1366200 4.67 1433095 81 61036 1342961 4.35 1403997 82 65951 1320579 4.76 1386530 83 57740 1317928 4.20 1375668 84 66085 1312053 4.80 1378138 85 57832 1303095 4.25 1360927 86 63277 1292153 4.67 1355430 87 56950 1284418 4.25 1341368 88 59986 1255768 4.56 1315754 89 57784 1240506 4.45 1298290 90 60830 1230610 4.71 1291440 91 52729 1217456 4.15 1270185 92 57874 1207886 4.57 1265760 93 54037 1198101 4.32 1252138 94 56651 1172426 4.61 1229077 95 51767 1169402 4.24 1221169 96 55315 1149019 4.59 1204334 97 50028 1135714 4.22 1185742 98 53760 1127415 4.55 1181175 99 50220 1115416 4.31 1165636 100 50986 1096072 4.44 1147058 101 47422 1084366 4.19 1131788 102 52191 1071667 4.64 1123858 103 45431 1058015 4.12 1103446 104 49431 1046498 4.51 1095929 105 46145 1034622 4.27 1080767 106 47981 1016639 4.51 1064620 107 44384 1005792 4.23 1050176 108 47291 991989 4.55 1039280 109 42998 985891 4.18 1028889 110 45835 965215 4.53 1011050 111 42575 960844 4.24 1003419 112 43910 950083 4.42 993993 113 40455 934215 4.15 974670 114 44753 921817 4.63 966570 115 38861 903395 4.12 942256 116 42919 892818 4.59 935737 117 38531 885651 4.17 924182 118 40698 870500 4.47 911198 119 38014 865677 4.21 903691 120 39952 854972 4.46 894924 121 36086 841067 4.11 877153 122 38973 824451 4.51 863424 123 35755 815811 4.20 851566 124 37738 798227 4.51 835965 125 34032 790500 4.13 824532 126 37293 777359 4.58 814652 127 32945 769596 4.11 802541 128 34598 756883 4.37 791481 129 34227 754033 4.34 788260 130 34111 736303 4.43 770414 131 32110 727079 4.23 759189 132 34006 720104 4.51 754110 133 30564 712510 4.11 743074 134 33303 700322 4.54 733625 135 30212 688597 4.20 718809 136 30816 674307 4.37 705123 137 29768 673306 4.23 703074 138 31770 656643 4.61 688413 139 29467 652209 4.32 681676 140 29555 639925 4.41 669480 141 29562 632897 4.46 662459 142 30633 620912 4.70 651545 143 27960 609801 4.38 637761 144 25653 578169 4.25 603822 145 17722 283460 5.88 301182 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 34646 22210 60.94 56856 2 34642 20254 63.10 54896 3 39136 19818 66.38 58954 4 40047 18494 68.41 58541 5 41308 17228 70.57 58536 6 44640 16419 73.11 61059 7 50001 15924 75.85 65925 8 48000 15053 76.13 63053 9 44781 15137 74.74 59918 10 43758 15000 74.47 58758 11 45142 15161 74.86 60303 12 42731 14899 74.15 57630 13 42099 13860 75.23 55959 14 43460 13736 75.98 57196 15 42909 13751 75.73 56660 16 43136 13538 76.11 56674 17 41764 13295 75.85 55059 18 42379 13107 76.38 55486 19 41620 13061 76.11 54681 20 39246 12123 76.40 51369 21 40067 12056 76.87 52123 22 38949 11732 76.85 50681 23 39574 11831 76.98 51405 24 37123 11663 76.09 48786 25 37079 11329 76.60 48408 26 36140 10610 77.30 46750 27 36702 10668 77.48 47370 28 36080 10413 77.60 46493 29 36606 10478 77.75 47084 30 34731 10277 77.17 45008 31 33990 9956 77.34 43946 32 33276 9410 77.96 42686 33 33043 9705 77.30 42748 34 32839 9190 78.13 42029 35 32355 9193 77.87 41548 36 30977 8892 77.70 39869 37 31582 8854 78.10 40436 38 30085 8501 77.97 38586 39 30104 8415 78.15 38519 40 28892 8262 77.76 37154 41 30523 8253 78.72 38776 42 28039 7940 77.93 35979 43 28624 8167 77.80 36791 44 27535 7606 78.36 35141 45 27229 7598 78.18 34827 46 26647 7469 78.11 34116 47 27509 7492 78.59 35001 48 27125 7295 78.81 34420 49 25713 7241 78.03 32954 50 24473 6864 78.10 31337 51 24519 7026 77.73 31545 52 23920 6654 78.24 30574 53 24193 6617 78.52 30810 54 23462 6313 78.80 29775 55 23009 6512 77.94 29521 56 21795 6093 78.15 27888 57 22054 6128 78.26 28182 58 21779 6140 78.01 27919 59 21280 6210 77.41 27490 60 20964 5874 78.11 26838 61 20940 5859 78.14 26799 62 20770 5810 78.14 26580 63 20625 5586 78.69 26211 64 19543 5373 78.44 24916 65 18913 5366 77.90 24279 66 18762 5430 77.55 24192 67 18740 5295 77.97 24035 68 18367 5054 78.42 23421 69 18227 5125 78.05 23352 70 17548 4918 78.11 22466 71 17578 4920 78.13 22498 72 17390 4813 78.32 22203 73 16942 4857 77.72 21799 74 16792 4524 78.78 21316 75 16728 4654 78.23 21382 76 16113 4491 78.20 20604 77 16683 4653 78.19 21336 78 15870 4413 78.24 20283 79 15446 4276 78.32 19722 80 15867 4229 78.96 20096 81 14747 4076 78.35 18823 82 14647 3996 78.57 18643 83 14441 4060 78.06 18501 84 14138 3949 78.17 18087 85 13818 3949 77.77 17767 86 13793 3802 78.39 17595 87 13410 3723 78.27 17133 88 13432 3782 78.03 17214 89 13493 3684 78.55 17177 90 13227 3563 78.78 16790 91 13113 3573 78.59 16686 92 12967 3442 79.02 16409 93 12397 3427 78.34 15824 94 12103 3393 78.10 15496 95 11858 3444 77.49 15302 96 11708 3310 77.96 15018 97 11496 3108 78.72 14604 98 11306 3137 78.28 14443 99 11373 3035 78.94 14408 100 11170 3041 78.60 14211 101 10931 2995 78.49 13926 102 10762 2874 78.92 13636 103 10881 2984 78.48 13865 104 10328 2896 78.10 13224 105 10076 2950 77.35 13026 106 10264 2802 78.56 13066 107 10039 2842 77.94 12881 108 10063 2675 79.00 12738 109 9357 2778 77.11 12135 110 9446 2594 78.46 12040 111 9224 2653 77.66 11877 112 9341 2603 78.21 11944 113 8986 2488 78.32 11474 114 8522 2554 76.94 11076 115 8502 2465 77.52 10967 116 8545 2341 78.50 10886 117 8375 2385 77.83 10760 118 7813 2294 77.30 10107 119 8313 2482 77.01 10795 120 7755 2196 77.93 9951 121 7911 2224 78.06 10135 122 7601 2187 77.66 9788 123 7525 2186 77.49 9711 124 7607 2175 77.77 9782 125 7099 2055 77.55 9154 126 7127 2096 77.27 9223 127 7119 2078 77.41 9197 128 6830 2001 77.34 8831 129 6902 2054 77.07 8956 130 6812 2035 77.00 8847 131 6632 2061 76.29 8693 132 6361 1873 77.25 8234 133 6297 1938 76.47 8235 134 5865 1809 76.43 7674 135 6067 1855 76.58 7922 136 6105 1750 77.72 7855 137 5834 1761 76.81 7595 138 5895 1737 77.24 7632 139 5704 1674 77.31 7378 140 5559 1684 76.75 7243 141 5441 1651 76.72 7092 142 5272 1629 76.39 6901 143 5116 1665 75.45 6781 144 4993 1504 76.85 6497 145 3872 715 84.41 4587 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 9972 320624 3.02 330596 2 8828 221458 3.83 230286 3 7372 200995 3.54 208367 4 5263 204048 2.51 209311 5 6834 198649 3.33 205483 6 9549 193135 4.71 202684 7 4517 191854 2.30 196371 8 4360 193514 2.20 197874 9 3730 187953 1.95 191683 10 3753 187595 1.96 191348 11 4582 185464 2.41 190046 12 3110 191277 1.60 194387 13 3240 178302 1.78 181542 14 2933 178394 1.62 181327 15 3148 173846 1.78 176994 16 2706 175115 1.52 177821 17 2566 169469 1.49 172035 18 2255 169530 1.31 171785 19 2160 165885 1.29 168045 20 2084 168321 1.22 170405 21 1945 162197 1.18 164142 22 1879 161585 1.15 163464 23 1749 158532 1.09 160281 24 1680 157253 1.06 158933 25 1567 154002 1.01 155569 26 1593 155201 1.02 156794 27 1532 146422 1.04 147954 28 1461 147968 0.98 149429 29 1296 145451 0.88 146747 30 1482 145023 1.01 146505 31 1249 139086 0.89 140335 32 1438 142571 1.00 144009 33 1119 137499 0.81 138618 34 1321 138003 0.95 139324 35 1132 134622 0.83 135754 36 1359 136608 0.99 137967 37 1020 128086 0.79 129106 38 1212 129551 0.93 130763 39 1044 125248 0.83 126292 40 1189 124463 0.95 125652 41 922 119099 0.77 120021 42 1047 122612 0.85 123659 43 924 117867 0.78 118791 44 998 118094 0.84 119092 45 1057 113543 0.92 114600 46 942 114876 0.81 115818 47 937 110188 0.84 111125 48 904 108540 0.83 109444 49 938 105370 0.88 106308 50 927 106747 0.86 107674 51 938 101970 0.91 102908 52 829 102748 0.80 103577 53 929 98890 0.93 99819 54 805 100475 0.79 101280 55 846 95596 0.88 96442 56 842 99580 0.84 100422 57 829 92179 0.89 93008 58 790 92761 0.84 93551 59 812 90393 0.89 91205 60 780 90779 0.85 91559 61 881 89039 0.98 89920 62 747 88073 0.84 88820 63 708 84100 0.83 84808 64 743 85211 0.86 85954 65 777 82379 0.93 83156 66 751 82874 0.90 83625 67 654 80035 0.81 80689 68 716 81394 0.87 82110 69 681 77481 0.87 78162 70 703 78925 0.88 79628 71 689 76544 0.89 77233 72 706 76943 0.91 77649 73 618 74063 0.83 74681 74 716 74506 0.95 75222 75 658 71638 0.91 72296 76 632 73568 0.85 74200 77 608 68581 0.88 69189 78 699 69064 1.00 69763 79 623 66284 0.93 66907 80 644 68335 0.93 68979 81 575 64604 0.88 65179 82 633 65524 0.96 66157 83 576 62152 0.92 62728 84 582 63242 0.91 63824 85 577 60781 0.94 61358 86 651 61022 1.06 61673 87 495 59338 0.83 59833 88 582 59675 0.97 60257 89 489 56169 0.86 56658 90 555 58951 0.93 59506 91 522 58003 0.89 58525 92 553 56505 0.97 57058 93 532 53681 0.98 54213 94 518 53912 0.95 54430 95 476 53212 0.89 53688 96 489 53620 0.90 54109 97 486 51192 0.94 51678 98 471 51060 0.91 51531 99 545 49547 1.09 50092 100 459 50091 0.91 50550 101 449 49244 0.90 49693 102 462 48448 0.94 48910 103 446 46216 0.96 46662 104 428 47998 0.88 48426 105 403 44323 0.90 44726 106 424 45292 0.93 45716 107 446 43780 1.01 44226 108 384 44704 0.85 45088 109 430 42610 1.00 43040 110 396 42033 0.93 42429 111 452 41821 1.07 42273 112 411 41682 0.98 42093 113 434 39794 1.08 40228 114 342 40142 0.84 40484 115 373 38744 0.95 39117 116 390 39777 0.97 40167 117 376 37775 0.99 38151 118 355 37338 0.94 37693 119 351 36162 0.96 36513 120 355 37137 0.95 37492 121 340 35822 0.94 36162 122 394 35444 1.10 35838 123 320 34247 0.93 34567 124 360 35249 1.01 35609 125 347 33254 1.03 33601 126 339 33151 1.01 33490 127 310 32180 0.95 32490 128 325 33145 0.97 33470 129 290 31427 0.91 31717 130 309 31368 0.98 31677 131 316 30700 1.02 31016 132 308 30777 0.99 31085 133 263 29527 0.88 29790 134 294 29568 0.98 29862 135 286 27994 1.01 28280 136 314 29004 1.07 29318 137 272 27444 0.98 27716 138 267 27284 0.97 27551 139 326 27322 1.18 27648 140 291 27430 1.05 27721 141 274 26572 1.02 26846 142 284 26111 1.08 26395 143 258 25028 1.02 25286 144 252 23862 1.05 24114 145 160 10789 1.46 10949 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 50176 536562 8.55 586738 2 47179 600282 7.29 647461 3 41515 582996 6.65 624511 4 37191 552400 6.31 589591 5 32961 524220 5.92 557181 6 35465 511149 6.49 546614 7 31162 494206 5.93 525368 8 30935 487164 5.97 518099 9 28981 483388 5.66 512369 10 30624 471336 6.10 501960 11 28391 468171 5.72 496562 12 28393 456490 5.86 484883 13 23774 444137 5.08 467911 14 27380 443721 5.81 471101 15 24444 437737 5.29 462181 16 25032 423784 5.58 448816 17 22289 418943 5.05 441232 18 24474 409286 5.64 433760 19 20912 407920 4.88 428832 20 22422 399203 5.32 421625 21 20632 404446 4.85 425078 22 21828 394486 5.24 416314 23 19081 390106 4.66 409187 24 21816 380934 5.42 402750 25 17421 380938 4.37 398359 26 20315 370858 5.19 391173 27 17639 373808 4.51 391447 28 19193 366537 4.98 385730 29 16419 360950 4.35 377369 30 18898 355555 5.05 374453 31 15291 352458 4.16 367749 32 18080 351029 4.90 369109 33 15105 347534 4.17 362639 34 17485 340944 4.88 358429 35 14173 337850 4.03 352023 36 17185 330319 4.95 347504 37 13517 321162 4.04 334679 38 16117 320739 4.78 336856 39 14094 316660 4.26 330754 40 15214 308113 4.71 323327 41 13423 308072 4.18 321495 42 16036 300437 5.07 316473 43 12863 294859 4.18 307722 44 15418 288261 5.08 303679 45 13021 286386 4.35 299407 46 14788 280922 5.00 295710 47 12702 282354 4.30 295056 48 14363 275049 4.96 289412 49 12381 271673 4.36 284054 50 13728 264293 4.94 278021 51 12581 261675 4.59 274256 52 13109 258197 4.83 271306 53 11699 255764 4.37 267463 54 13759 251333 5.19 265092 55 10934 249077 4.21 260011 56 12812 243279 5.00 256091 57 11530 240734 4.57 252264 58 12187 234094 4.95 246281 59 11369 236267 4.59 247636 60 11946 231761 4.90 243707 61 10571 227348 4.44 237919 62 12039 221137 5.16 233176 63 10345 218231 4.53 228576 64 11529 217278 5.04 228807 65 9932 213850 4.44 223782 66 11647 210626 5.24 222273 67 9401 209737 4.29 219138 68 11114 202525 5.20 213639 69 10051 200428 4.78 210479 70 10700 196812 5.16 207512 71 9202 194090 4.53 203292 72 10521 192036 5.19 202557 73 8692 188668 4.40 197360 74 10559 184921 5.40 195480 75 8610 184209 4.47 192819 76 9713 180775 5.10 190488 77 8563 178207 4.58 186770 78 9846 175944 5.30 185790 79 8158 173897 4.48 182055 80 9413 171997 5.19 181410 81 8211 168348 4.65 176559 82 9038 164542 5.21 173580 83 7505 164315 4.37 171820 84 9218 162472 5.37 171690 85 7583 159631 4.53 167214 86 8412 157295 5.08 165707 87 7476 156071 4.57 163547 88 8099 152647 5.04 160746 89 7442 151148 4.69 158590 90 8338 148045 5.33 156383 91 6520 145810 4.28 152330 92 7525 145433 4.92 152958 93 6929 143938 4.59 150867 94 7376 139668 5.02 147044 95 6428 137938 4.45 144366 96 7166 135207 5.03 142373 97 6263 134951 4.44 141214 98 6953 133166 4.96 140119 99 6444 131128 4.68 137572 100 6486 128565 4.80 135051 101 5921 126566 4.47 132487 102 6935 125225 5.25 132160 103 5517 123771 4.27 129288 104 6350 122345 4.93 128695 105 5741 120250 4.56 125991 106 5982 117769 4.83 123751 107 5373 116910 4.39 122283 108 5910 114389 4.91 120299 109 5261 113933 4.41 119194 110 5706 110835 4.90 116541 111 5091 109486 4.44 114577 112 5427 108638 4.76 114065 113 4886 106899 4.37 111785 114 5447 104254 4.97 109701 115 4492 102473 4.20 106965 116 5128 101207 4.82 106335 117 4676 101499 4.40 106175 118 5021 98716 4.84 103737 119 4484 98442 4.36 102926 120 4737 96286 4.69 101023 121 4112 94057 4.19 98169 122 4676 93588 4.76 98264 123 4144 92363 4.29 96507 124 4555 90398 4.80 94953 125 3854 89931 4.11 93785 126 4466 88787 4.79 93253 127 3825 87011 4.21 90836 128 4156 85044 4.66 89200 129 4127 85362 4.61 89489 130 4021 82611 4.64 86632 131 3514 81701 4.12 85215 132 3996 80267 4.74 84263 133 3416 79436 4.12 82852 134 3842 78579 4.66 82421 135 3550 77000 4.41 80550 136 3429 75179 4.36 78608 137 3319 75658 4.20 78977 138 3609 74258 4.63 77867 139 3239 72657 4.27 75896 140 3343 71039 4.49 74382 141 3109 70145 4.24 73254 142 3220 69270 4.44 72490 143 2798 68160 3.94 70958 144 2751 62912 4.19 65663 145 1685 30634 5.21 32319