CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 50496 1078499 4.47 1128995 2 48557 950356 4.86 998913 3 45994 1035875 4.25 1081869 4 32249 1028668 3.04 1060917 5 31659 1004579 3.06 1036238 6 42950 994191 4.14 1037141 7 57846 1011482 5.41 1069328 8 37683 1004640 3.62 1042323 9 18991 1063455 1.75 1082446 10 17981 1033959 1.71 1051940 11 17688 1057658 1.64 1075346 12 16108 1052342 1.51 1068450 13 15682 1086020 1.42 1101702 14 15368 1054168 1.44 1069536 15 15751 1097555 1.41 1113306 16 14617 1080086 1.34 1094703 17 13664 1096839 1.23 1110503 18 12389 1132590 1.08 1144979 19 11892 1114390 1.06 1126282 20 11450 1104814 1.03 1116264 21 11239 1128309 0.99 1139548 22 11127 1140897 0.97 1152024 23 10684 1107126 0.96 1117810 24 10151 1108525 0.91 1118676 25 9795 1138548 0.85 1148343 26 9465 1111002 0.84 1120467 27 9259 1116888 0.82 1126147 28 9006 1114707 0.80 1123713 29 8715 1106268 0.78 1114983 30 8845 1122641 0.78 1131486 31 8571 1130759 0.75 1139330 32 8764 1143690 0.76 1152454 33 8643 1170060 0.73 1178703 34 8409 1129887 0.74 1138296 35 8109 1109141 0.73 1117250 36 8266 1134541 0.72 1142807 37 8309 1161986 0.71 1170295 38 8260 1113598 0.74 1121858 39 8208 1100312 0.74 1108520 40 8210 1116302 0.73 1124512 41 8084 1109117 0.72 1117201 42 8293 1126286 0.73 1134579 43 8310 1114294 0.74 1122604 44 8373 1103302 0.75 1111675 45 8400 1112981 0.75 1121381 46 8385 1114318 0.75 1122703 47 8535 1114126 0.76 1122661 48 8426 1115269 0.75 1123695 49 8681 1122332 0.77 1131013 50 8714 1097667 0.79 1106381 51 8459 1113844 0.75 1122303 52 8567 1094142 0.78 1102709 53 8554 1087220 0.78 1095774 54 8813 1088225 0.80 1097038 55 8796 1081130 0.81 1089926 56 8565 1071122 0.79 1079687 57 8928 1088732 0.81 1097660 58 8997 1087270 0.82 1096267 59 9152 1061407 0.85 1070559 60 9094 1066893 0.85 1075987 61 9188 1061091 0.86 1070279 62 9047 1038711 0.86 1047758 63 8947 1032272 0.86 1041219 64 9472 1051959 0.89 1061431 65 9154 1024575 0.89 1033729 66 9056 1043063 0.86 1052119 67 9398 1025631 0.91 1035029 68 9429 1007416 0.93 1016845 69 9350 1001021 0.93 1010371 70 9498 1006602 0.93 1016100 71 9212 1002231 0.91 1011443 72 9316 989442 0.93 998758 73 9223 982770 0.93 991993 74 9259 973063 0.94 982322 75 9188 966163 0.94 975351 76 9498 961307 0.98 970805 77 9099 945487 0.95 954586 78 9390 953090 0.98 962480 79 9547 946601 1.00 956148 80 9548 948502 1.00 958050 81 9426 940930 0.99 950356 82 9393 927666 1.00 937059 83 9650 913373 1.05 923023 84 9616 910346 1.05 919962 85 9415 905257 1.03 914672 86 9337 885964 1.04 895301 87 9588 883989 1.07 893577 88 9528 889340 1.06 898868 89 9522 871007 1.08 880529 90 9383 873682 1.06 883065 91 9381 862294 1.08 871675 92 9339 844608 1.09 853947 93 9521 851875 1.11 861396 94 9477 835570 1.12 845047 95 9435 828104 1.13 837539 96 9350 824608 1.12 833958 97 9633 822935 1.16 832568 98 9363 797435 1.16 806798 99 9496 796625 1.18 806121 100 9510 797210 1.18 806720 101 9308 780903 1.18 790211 102 9447 780822 1.20 790269 103 9400 772929 1.20 782329 104 9304 763978 1.20 773282 105 9456 759009 1.23 768465 106 9368 764743 1.21 774111 107 9312 760849 1.21 770161 108 9493 752554 1.25 762047 109 9290 736354 1.25 745644 110 9069 729769 1.23 738838 111 9095 727367 1.23 736462 112 9142 722325 1.25 731467 113 9050 706957 1.26 716007 114 9242 694678 1.31 703920 115 9094 693994 1.29 703088 116 9085 683117 1.31 692202 117 9202 677607 1.34 686809 118 9054 671420 1.33 680474 119 8795 667999 1.30 676794 120 8989 650644 1.36 659633 121 8736 639807 1.35 648543 122 8906 637016 1.38 645922 123 8720 633189 1.36 641909 124 8695 620970 1.38 629665 125 8662 615673 1.39 624335 126 8751 609466 1.42 618217 127 8438 602418 1.38 610856 128 8502 588753 1.42 597255 129 8463 587196 1.42 595659 130 8467 574754 1.45 583221 131 8206 565924 1.43 574130 132 8351 561949 1.46 570300 133 8192 560375 1.44 568567 134 8181 553540 1.46 561721 135 8256 545056 1.49 553312 136 8082 540656 1.47 548738 137 8116 529660 1.51 537776 138 8086 524267 1.52 532353 139 8187 519499 1.55 527686 140 8384 520054 1.59 528438 141 9001 517145 1.71 526146 142 9510 508127 1.84 517637 143 9896 499176 1.94 509072 144 9383 482210 1.91 491593 145 7143 255238 2.72 262381 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 53208 1629065 3.16 1682273 2 50290 1106412 4.35 1156702 3 37601 1075967 3.38 1113568 4 29862 1054022 2.76 1083884 5 40324 1047298 3.71 1087622 6 57430 1039050 5.24 1096480 7 26396 1074697 2.40 1101093 8 28857 1084577 2.59 1113434 9 16870 1085692 1.53 1102562 10 17882 1099341 1.60 1117223 11 18882 1066733 1.74 1085615 12 15210 1113561 1.35 1128771 13 14758 1101972 1.32 1116730 14 14345 1092599 1.30 1106944 15 14425 1100033 1.29 1114458 16 13376 1124824 1.18 1138200 17 12010 1149209 1.03 1161219 18 10899 1154180 0.94 1165079 19 10319 1153979 0.89 1164298 20 9920 1147400 0.86 1157320 21 9578 1131144 0.84 1140722 22 9409 1127270 0.83 1136679 23 9620 1155892 0.83 1165512 24 8700 1131190 0.76 1139890 25 8575 1152987 0.74 1161562 26 8598 1179241 0.72 1187839 27 8132 1155494 0.70 1163626 28 8062 1164988 0.69 1173050 29 7752 1161641 0.66 1169393 30 7544 1144690 0.65 1152234 31 7746 1184062 0.65 1191808 32 7533 1164047 0.64 1171580 33 7401 1166609 0.63 1174010 34 7588 1172761 0.64 1180349 35 7474 1158771 0.64 1166245 36 7342 1146153 0.64 1153495 37 7671 1176398 0.65 1184069 38 7394 1146903 0.64 1154297 39 7624 1158092 0.65 1165716 40 7433 1157078 0.64 1164511 41 7508 1164476 0.64 1171984 42 7777 1177431 0.66 1185208 43 7522 1148534 0.65 1156056 44 7504 1148969 0.65 1156473 45 7821 1157476 0.67 1165297 46 7747 1152037 0.67 1159784 47 7805 1165835 0.67 1173640 48 7802 1144113 0.68 1151915 49 7878 1132512 0.69 1140390 50 8108 1148933 0.70 1157041 51 8175 1134600 0.72 1142775 52 8386 1156983 0.72 1165369 53 8018 1122912 0.71 1130930 54 8135 1112131 0.73 1120266 55 8285 1116222 0.74 1124507 56 8410 1105940 0.75 1114350 57 8507 1113073 0.76 1121580 58 8496 1105168 0.76 1113664 59 8568 1092948 0.78 1101516 60 8586 1084937 0.79 1093523 61 8437 1084018 0.77 1092455 62 8834 1099061 0.80 1107895 63 8909 1090391 0.81 1099300 64 8797 1074561 0.81 1083358 65 9057 1073506 0.84 1082563 66 8966 1053973 0.84 1062939 67 9227 1061748 0.86 1070975 68 9043 1066427 0.84 1075470 69 9039 1044675 0.86 1053714 70 9445 1037481 0.90 1046926 71 9349 1029006 0.90 1038355 72 9313 1025483 0.90 1034796 73 9487 1033558 0.91 1043045 74 9360 1021269 0.91 1030629 75 9368 1005199 0.92 1014567 76 9474 996991 0.94 1006465 77 9616 1001926 0.95 1011542 78 9660 990323 0.97 999983 79 9460 985691 0.95 995151 80 9562 984929 0.96 994491 81 9709 974288 0.99 983997 82 9717 979876 0.98 989593 83 9544 955203 0.99 964747 84 9746 951760 1.01 961506 85 9670 944642 1.01 954312 86 9996 941411 1.05 951407 87 9753 928112 1.04 937865 88 9793 921478 1.05 931271 89 9759 916428 1.05 926187 90 9729 907661 1.06 917390 91 9778 904522 1.07 914300 92 9840 893306 1.09 903146 93 9768 884693 1.09 894461 94 9652 883669 1.08 893321 95 9754 872283 1.11 882037 96 9862 864169 1.13 874031 97 10140 870533 1.15 880673 98 9712 847524 1.13 857236 99 9762 830894 1.16 840656 100 9942 836023 1.18 845965 101 9837 816358 1.19 826195 102 9765 814910 1.18 824675 103 9633 807367 1.18 817000 104 9657 804987 1.19 814644 105 9541 785489 1.20 795030 106 9524 778803 1.21 788327 107 9781 783185 1.23 792966 108 9570 774864 1.22 784434 109 9509 768248 1.22 777757 110 9432 756605 1.23 766037 111 9347 751435 1.23 760782 112 9262 746366 1.23 755628 113 9512 748225 1.26 757737 114 9264 724544 1.26 733808 115 9256 717801 1.27 727057 116 9420 711877 1.31 721297 117 9492 705270 1.33 714762 118 9350 695581 1.33 704931 119 9316 690747 1.33 700063 120 9037 680055 1.31 689092 121 9093 667930 1.34 677023 122 9145 664932 1.36 674077 123 9109 662272 1.36 671381 124 9061 650167 1.37 659228 125 8926 644669 1.37 653595 126 8952 641487 1.38 650439 127 8749 632454 1.36 641203 128 8937 624912 1.41 633849 129 8806 619525 1.40 628331 130 8730 605424 1.42 614154 131 8595 601806 1.41 610401 132 8605 594235 1.43 602840 133 8553 589766 1.43 598319 134 8668 588693 1.45 597361 135 8479 575626 1.45 584105 136 8453 566801 1.47 575254 137 8454 558860 1.49 567314 138 8612 555067 1.53 563679 139 8762 551341 1.56 560103 140 8910 547705 1.60 556615 141 9185 542047 1.67 551232 142 9793 536620 1.79 546413 143 9940 525460 1.86 535400 144 9168 504106 1.79 513274 145 6894 284881 2.36 291775 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 364773 4572324 7.39 4937097 2 322703 5110909 5.94 5433612 3 288587 5134295 5.32 5422882 4 200559 4965990 3.88 5166549 5 178788 4916527 3.51 5095315 6 174106 4748064 3.54 4922170 7 154494 4623949 3.23 4778443 8 134483 4645197 2.81 4779680 9 127112 4649951 2.66 4777063 10 129365 4634674 2.72 4764039 11 133090 4605441 2.81 4738531 12 106575 4634583 2.25 4741158 13 99166 4590930 2.11 4690096 14 102340 4580832 2.19 4683172 15 103273 4631433 2.18 4734706 16 96119 4589668 2.05 4685787 17 85929 4592165 1.84 4678094 18 79235 4618721 1.69 4697956 19 73488 4636256 1.56 4709744 20 71788 4656939 1.52 4728727 21 66564 4697985 1.40 4764549 22 64582 4700591 1.36 4765173 23 61412 4726713 1.28 4788125 24 59687 4786154 1.23 4845841 25 55946 4754790 1.16 4810736 26 56845 4782697 1.17 4839542 27 54578 4773542 1.13 4828120 28 52316 4757868 1.09 4810184 29 51657 4795127 1.07 4846784 30 50055 4833626 1.02 4883681 31 47322 4852449 0.97 4899771 32 46042 4863032 0.94 4909074 33 44544 4897093 0.90 4941637 34 44487 4918764 0.90 4963251 35 42923 4896383 0.87 4939306 36 43839 4924486 0.88 4968325 37 42305 4883887 0.86 4926192 38 42931 4883903 0.87 4926834 39 43296 4909429 0.87 4952725 40 41555 4886210 0.84 4927765 41 40732 4889982 0.83 4930714 42 41109 4957443 0.82 4998552 43 40287 4924584 0.81 4964871 44 41289 4921513 0.83 4962802 45 40094 4930155 0.81 4970249 46 42042 4896463 0.85 4938505 47 41764 4891433 0.85 4933197 48 42345 4900998 0.86 4943343 49 43184 4850235 0.88 4893419 50 42617 4881331 0.87 4923948 51 41441 4888215 0.84 4929656 52 41078 4850813 0.84 4891891 53 41319 4835736 0.85 4877055 54 43004 4866155 0.88 4909159 55 42016 4848275 0.86 4890291 56 44157 4852764 0.90 4896921 57 44410 4847175 0.91 4891585 58 43930 4808940 0.91 4852870 59 45224 4806920 0.93 4852144 60 44192 4787619 0.91 4831811 61 43295 4745936 0.90 4789231 62 44138 4729113 0.92 4773251 63 44392 4760476 0.92 4804868 64 44883 4742321 0.94 4787204 65 44906 4722880 0.94 4767786 66 46854 4716088 0.98 4762942 67 46345 4660056 0.98 4706401 68 46713 4698851 0.98 4745564 69 47172 4639657 1.01 4686829 70 46595 4604920 1.00 4651515 71 45715 4560085 0.99 4605800 72 46116 4572851 1.00 4618967 73 46153 4505838 1.01 4551991 74 46986 4500080 1.03 4547066 75 46537 4477216 1.03 4523753 76 48052 4418862 1.08 4466914 77 48241 4393526 1.09 4441767 78 48088 4375770 1.09 4423858 79 48630 4349279 1.11 4397909 80 48296 4314015 1.11 4362311 81 47972 4302696 1.10 4350668 82 48096 4298839 1.11 4346935 83 47599 4227719 1.11 4275318 84 48559 4222310 1.14 4270869 85 47679 4159799 1.13 4207478 86 49432 4130660 1.18 4180092 87 49543 4109260 1.19 4158803 88 49109 4047896 1.20 4097005 89 50058 4027198 1.23 4077256 90 49579 4020264 1.22 4069843 91 48749 3999280 1.20 4048029 92 48748 3962663 1.22 4011411 93 48612 3933197 1.22 3981809 94 49049 3871094 1.25 3920143 95 49045 3837655 1.26 3886700 96 50026 3826869 1.29 3876895 97 50070 3789650 1.30 3839720 98 49524 3752046 1.30 3801570 99 49775 3745588 1.31 3795363 100 48883 3684257 1.31 3733140 101 47806 3656747 1.29 3704553 102 48327 3629798 1.31 3678125 103 48067 3586830 1.32 3634897 104 48037 3560109 1.33 3608146 105 47623 3510939 1.34 3558562 106 48720 3474507 1.38 3523227 107 48610 3451592 1.39 3500202 108 48434 3440837 1.39 3489271 109 48493 3417887 1.40 3466380 110 48293 3362264 1.42 3410557 111 47335 3338276 1.40 3385611 112 47345 3298649 1.41 3345994 113 46925 3265814 1.42 3312739 114 47479 3244289 1.44 3291768 115 46329 3196833 1.43 3243162 116 47317 3157282 1.48 3204599 117 47382 3146199 1.48 3193581 118 46901 3115304 1.48 3162205 119 47662 3089655 1.52 3137317 120 47602 3073648 1.53 3121250 121 46275 3039470 1.50 3085745 122 46214 2999782 1.52 3045996 123 45891 2967217 1.52 3013108 124 45792 2943039 1.53 2988831 125 45824 2899132 1.56 2944956 126 46369 2869878 1.59 2916247 127 46369 2833712 1.61 2880081 128 45820 2807366 1.61 2853186 129 46131 2783799 1.63 2829930 130 45670 2751968 1.63 2797638 131 44698 2718027 1.62 2762725 132 44598 2681338 1.64 2725936 133 44055 2639403 1.64 2683458 134 44605 2612836 1.68 2657441 135 43140 2578711 1.65 2621851 136 44342 2554956 1.71 2599298 137 44415 2532670 1.72 2577085 138 45210 2506658 1.77 2551868 139 44986 2483003 1.78 2527989 140 45729 2459747 1.83 2505476 141 46319 2441797 1.86 2488116 142 47413 2416337 1.92 2463750 143 47716 2382171 1.96 2429887 144 43501 2293348 1.86 2336849 145 31228 1269026 2.40 1300254 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 28026 471020 5.62 499046 2 26018 410439 5.96 436457 3 28327 435963 6.10 464290 4 18695 419432 4.27 438127 5 18996 396963 4.57 415959 6 30401 388286 7.26 418687 7 47285 388560 10.85 435845 8 28171 381112 6.88 409283 9 10376 396493 2.55 406869 10 10211 377665 2.63 387876 11 10657 389182 2.67 399839 12 8722 380469 2.24 389191 13 8260 381793 2.12 390053 14 7935 374262 2.08 382197 15 7969 382081 2.04 390050 16 7131 368567 1.90 375698 17 6376 369530 1.70 375906 18 5882 371046 1.56 376928 19 5498 363257 1.49 368755 20 5217 360133 1.43 365350 21 4921 366045 1.33 370966 22 4812 368886 1.29 373698 23 4602 346637 1.31 351239 24 4195 346121 1.20 350316 25 3850 354477 1.07 358327 26 3459 333458 1.03 336917 27 3292 333067 0.98 336359 28 3087 326174 0.94 329261 29 2885 323068 0.89 325953 30 2799 323753 0.86 326552 31 2684 316353 0.84 319037 32 2565 320523 0.79 323088 33 2512 329364 0.76 331876 34 2333 309113 0.75 311446 35 2178 300401 0.72 302579 36 2165 305213 0.70 307378 37 2325 314251 0.73 316576 38 2185 292302 0.74 294487 39 2141 284292 0.75 286433 40 2064 285026 0.72 287090 41 1900 279074 0.68 280974 42 2011 283290 0.70 285301 43 1948 274521 0.70 276469 44 1935 268854 0.71 270789 45 1845 264549 0.69 266394 46 1789 266307 0.67 268096 47 1855 262488 0.70 264343 48 1817 257281 0.70 259098 49 1773 258472 0.68 260245 50 1703 247386 0.68 249089 51 1709 247017 0.69 248726 52 1690 238956 0.70 240646 53 1625 237784 0.68 239409 54 1765 234619 0.75 236384 55 1644 230699 0.71 232343 56 1587 226552 0.70 228139 57 1595 229950 0.69 231545 58 1582 224247 0.70 225829 59 1599 217167 0.73 218766 60 1516 215268 0.70 216784 61 1480 211187 0.70 212667 62 1496 207390 0.72 208886 63 1453 200950 0.72 202403 64 1420 204159 0.69 205579 65 1412 197257 0.71 198669 66 1447 202000 0.71 203447 67 1417 194794 0.72 196211 68 1405 190583 0.73 191988 69 1451 187263 0.77 188714 70 1338 186216 0.71 187554 71 1279 186886 0.68 188165 72 1305 180965 0.72 182270 73 1316 176262 0.74 177578 74 1213 172636 0.70 173849 75 1246 171570 0.72 172816 76 1181 170203 0.69 171384 77 1201 166751 0.72 167952 78 1226 164088 0.74 165314 79 1199 164917 0.72 166116 80 1213 165073 0.73 166286 81 1179 163396 0.72 164575 82 1160 158486 0.73 159646 83 1107 153009 0.72 154116 84 1054 150058 0.70 151112 85 1108 149292 0.74 150400 86 979 144855 0.67 145834 87 1026 143241 0.71 144267 88 1018 142285 0.71 143303 89 1026 140844 0.72 141870 90 1000 138759 0.72 139759 91 1014 138099 0.73 139113 92 929 132114 0.70 133043 93 913 133063 0.68 133976 94 923 129497 0.71 130420 95 911 126901 0.71 127812 96 934 127225 0.73 128159 97 892 127390 0.70 128282 98 860 121644 0.70 122504 99 916 120994 0.75 121910 100 857 120374 0.71 121231 101 852 118519 0.71 119371 102 924 117211 0.78 118135 103 855 113983 0.74 114838 104 856 112875 0.75 113731 105 789 111471 0.70 112260 106 827 113780 0.72 114607 107 841 113061 0.74 113902 108 875 111684 0.78 112559 109 781 107935 0.72 108716 110 815 106884 0.76 107699 111 731 103726 0.70 104457 112 705 103525 0.68 104230 113 740 102925 0.71 103665 114 705 97677 0.72 98382 115 796 99244 0.80 100040 116 716 96340 0.74 97056 117 726 95985 0.75 96711 118 731 95184 0.76 95915 119 756 94148 0.80 94904 120 660 89870 0.73 90530 121 639 87630 0.72 88269 122 648 87316 0.74 87964 123 612 87362 0.70 87974 124 626 84266 0.74 84892 125 642 82651 0.77 83293 126 608 81143 0.74 81751 127 617 79690 0.77 80307 128 570 78656 0.72 79226 129 567 78210 0.72 78777 130 553 75893 0.72 76446 131 550 74688 0.73 75238 132 501 74518 0.67 75019 133 534 75010 0.71 75544 134 556 72291 0.76 72847 135 521 71450 0.72 71971 136 523 70120 0.74 70643 137 528 68873 0.76 69401 138 494 68231 0.72 68725 139 489 66926 0.73 67415 140 485 67085 0.72 67570 141 485 67610 0.71 68095 142 492 65152 0.75 65644 143 465 63033 0.73 63498 144 467 59362 0.78 59829 145 325 26803 1.20 27128 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 30228 757854 3.84 788082 2 27895 484488 5.44 512383 3 22668 452799 4.77 475467 4 16991 436131 3.75 453122 5 27126 421467 6.05 448593 6 43997 412110 9.65 456107 7 14526 413855 3.39 428381 8 14706 417513 3.40 432219 9 9049 413137 2.14 422186 10 10664 407837 2.55 418501 11 12693 391949 3.14 404642 12 7978 398362 1.96 406340 13 7781 394709 1.93 402490 14 7346 383181 1.88 390527 15 7248 378558 1.88 385806 16 6345 384192 1.62 390537 17 5749 385011 1.47 390760 18 5238 381725 1.35 386963 19 4886 379897 1.27 384783 20 4589 376210 1.21 380799 21 4191 361930 1.14 366121 22 4205 363679 1.14 367884 23 4079 364354 1.11 368433 24 3319 350186 0.94 353505 25 3223 352558 0.91 355781 26 3034 356831 0.84 359865 27 2918 344797 0.84 347715 28 2741 344872 0.79 347613 29 2524 343058 0.73 345582 30 2419 331265 0.72 333684 31 2368 340023 0.69 342391 32 2228 331142 0.67 333370 33 2217 326502 0.67 328719 34 2109 321959 0.65 324068 35 2121 318287 0.66 320408 36 1998 310155 0.64 312153 37 1960 316420 0.62 318380 38 1929 305063 0.63 306992 39 1923 302205 0.63 304128 40 1796 296631 0.60 298427 41 1799 297917 0.60 299716 42 1806 295040 0.61 296846 43 1733 284134 0.61 285867 44 1667 281854 0.59 283521 45 1714 276374 0.62 278088 46 1730 275150 0.62 276880 47 1672 277150 0.60 278822 48 1610 266363 0.60 267973 49 1651 260207 0.63 261858 50 1532 262366 0.58 263898 51 1638 258001 0.63 259639 52 1601 258696 0.62 260297 53 1476 249632 0.59 251108 54 1411 243163 0.58 244574 55 1493 240187 0.62 241680 56 1520 236752 0.64 238272 57 1486 235656 0.63 237142 58 1361 228330 0.59 229691 59 1344 223141 0.60 224485 60 1371 220708 0.62 222079 61 1296 216655 0.59 217951 62 1379 217034 0.63 218413 63 1329 215706 0.61 217035 64 1245 208831 0.59 210076 65 1296 210518 0.61 211814 66 1297 203448 0.63 204745 67 1288 204198 0.63 205486 68 1235 203414 0.60 204649 69 1249 198936 0.62 200185 70 1174 189163 0.62 190337 71 1203 188986 0.63 190189 72 1146 186663 0.61 187809 73 1176 190352 0.61 191528 74 1107 183932 0.60 185039 75 1095 179752 0.61 180847 76 1093 174811 0.62 175904 77 1091 176093 0.62 177184 78 1097 174133 0.63 175230 79 1113 171674 0.64 172787 80 1098 167390 0.65 168488 81 1087 167159 0.65 168246 82 1042 166259 0.62 167301 83 952 161979 0.58 162931 84 997 159076 0.62 160073 85 1000 154521 0.64 155521 86 1009 154464 0.65 155473 87 952 151999 0.62 152951 88 976 148735 0.65 149711 89 983 146975 0.66 147958 90 907 144087 0.63 144994 91 956 141259 0.67 142215 92 865 141500 0.61 142365 93 859 139002 0.61 139861 94 905 139152 0.65 140057 95 871 135082 0.64 135953 96 919 131309 0.70 132228 97 882 134129 0.65 135011 98 870 128632 0.67 129502 99 806 126105 0.64 126911 100 799 126436 0.63 127235 101 834 122035 0.68 122869 102 807 123401 0.65 124208 103 775 117763 0.65 118538 104 799 116684 0.68 117483 105 717 114738 0.62 115455 106 724 111717 0.64 112441 107 751 113552 0.66 114303 108 731 111540 0.65 112271 109 726 109103 0.66 109829 110 689 107485 0.64 108174 111 671 105685 0.63 106356 112 685 105560 0.64 106245 113 675 104844 0.64 105519 114 716 101911 0.70 102627 115 732 100494 0.72 101226 116 620 99677 0.62 100297 117 629 98213 0.64 98842 118 658 95992 0.68 96650 119 654 94319 0.69 94973 120 613 93587 0.65 94200 121 654 91600 0.71 92254 122 628 90483 0.69 91111 123 606 89420 0.67 90026 124 530 87455 0.60 87985 125 589 85258 0.69 85847 126 513 84618 0.60 85131 127 561 82289 0.68 82850 128 556 82047 0.67 82603 129 537 80469 0.66 81006 130 499 78458 0.63 78957 131 524 77975 0.67 78499 132 548 76568 0.71 77116 133 490 76331 0.64 76821 134 491 76998 0.63 77489 135 497 73995 0.67 74492 136 485 72498 0.66 72983 137 468 71546 0.65 72014 138 454 70941 0.64 71395 139 453 70575 0.64 71028 140 491 71053 0.69 71544 141 463 68265 0.67 68728 142 450 67523 0.66 67973 143 383 64834 0.59 65217 144 348 60853 0.57 61201 145 214 28439 0.75 28653 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 207824 2026067 9.30 2233891 2 166176 2273817 6.81 2439993 3 165398 2217786 6.94 2383184 4 97857 2146147 4.36 2244004 5 88842 2072068 4.11 2160910 6 94410 1929400 4.66 2023810 7 84442 1863806 4.33 1948248 8 66802 1856139 3.47 1922941 9 62776 1850198 3.28 1912974 10 69980 1837302 3.67 1907282 11 82614 1783849 4.43 1866463 12 53925 1796711 2.91 1850636 13 49770 1746316 2.77 1796086 14 49446 1722886 2.79 1772332 15 49023 1725350 2.76 1774373 16 43658 1679266 2.53 1722924 17 38538 1666478 2.26 1705016 18 34991 1665841 2.06 1700832 19 31943 1660477 1.89 1692420 20 29797 1652857 1.77 1682654 21 27381 1644439 1.64 1671820 22 25038 1622000 1.52 1647038 23 23738 1618890 1.45 1642628 24 22591 1610518 1.38 1633109 25 20335 1577315 1.27 1597650 26 20107 1565794 1.27 1585901 27 19130 1549283 1.22 1568413 28 18013 1528086 1.17 1546099 29 16735 1518871 1.09 1535606 30 15605 1520823 1.02 1536428 31 14513 1499393 0.96 1513906 32 13632 1479637 0.91 1493269 33 13422 1471813 0.90 1485235 34 12717 1453920 0.87 1466637 35 11950 1429088 0.83 1441038 36 11860 1420152 0.83 1432012 37 11335 1401087 0.80 1412422 38 11184 1374850 0.81 1386034 39 10851 1365381 0.79 1376232 40 10340 1343381 0.76 1353721 41 9920 1331283 0.74 1341203 42 9751 1330271 0.73 1340022 43 9532 1302242 0.73 1311774 44 9758 1291920 0.75 1301678 45 9123 1282158 0.71 1291281 46 9242 1248875 0.73 1258117 47 9237 1229358 0.75 1238595 48 9206 1217951 0.75 1227157 49 8857 1197017 0.73 1205874 50 8621 1187314 0.72 1195935 51 8683 1179022 0.73 1187705 52 8221 1152760 0.71 1160981 53 8123 1143701 0.71 1151824 54 8260 1136718 0.72 1144978 55 7984 1116012 0.71 1123996 56 8318 1109192 0.74 1117510 57 8158 1098959 0.74 1107117 58 7933 1078790 0.73 1086723 59 8112 1076141 0.75 1084253 60 7651 1057235 0.72 1064886 61 7390 1033706 0.71 1041096 62 7247 1015262 0.71 1022509 63 7253 1013886 0.71 1021139 64 7357 1001675 0.73 1009032 65 6989 986492 0.70 993481 66 7286 985151 0.73 992437 67 7223 965484 0.74 972707 68 7198 966799 0.74 973997 69 7101 947279 0.74 954380 70 6811 928567 0.73 935378 71 6564 910838 0.72 917402 72 6514 913677 0.71 920191 73 6374 893220 0.71 899594 74 6490 885870 0.73 892360 75 6141 874193 0.70 880334 76 6229 853415 0.72 859644 77 6217 842912 0.73 849129 78 6189 833695 0.74 839884 79 6195 824825 0.75 831020 80 5926 813438 0.72 819364 81 5732 810571 0.70 816303 82 5720 805303 0.71 811023 83 5470 786244 0.69 791714 84 5662 780780 0.72 786442 85 5412 760976 0.71 766388 86 5479 753945 0.72 759424 87 5376 746539 0.71 751915 88 5316 733159 0.72 738475 89 5264 726071 0.72 731335 90 5218 720113 0.72 725331 91 5114 714483 0.71 719597 92 5016 700068 0.71 705084 93 4791 693234 0.69 698025 94 4903 675648 0.72 680551 95 4636 667883 0.69 672519 96 4750 661677 0.71 666427 97 4792 651456 0.73 656248 98 4676 641344 0.72 646020 99 4660 642315 0.72 646975 100 4415 626161 0.70 630576 101 4329 615615 0.70 619944 102 4368 611849 0.71 616217 103 4168 600580 0.69 604748 104 4295 592070 0.72 596365 105 4017 580621 0.69 584638 106 4134 573124 0.72 577258 107 4223 569686 0.74 573909 108 4158 567137 0.73 571295 109 4096 560462 0.73 564558 110 3753 545853 0.68 549606 111 3716 541914 0.68 545630 112 3760 535771 0.70 539531 113 3811 525215 0.72 529026 114 3774 518875 0.72 522649 115 3543 509051 0.69 512594 116 3674 499816 0.73 503490 117 3644 497651 0.73 501295 118 3628 491375 0.73 495003 119 3446 487464 0.70 490910 120 3446 485097 0.71 488543 121 3359 476833 0.70 480192 122 3234 467705 0.69 470939 123 3285 461842 0.71 465127 124 3165 458986 0.68 462151 125 3126 447989 0.69 451115 126 3317 442886 0.74 446203 127 3036 436243 0.69 439279 128 3097 430212 0.71 433309 129 3122 424629 0.73 427751 130 2978 418866 0.71 421844 131 3016 410972 0.73 413988 132 2913 404670 0.71 407583 133 2776 398037 0.69 400813 134 2708 393290 0.68 395998 135 2702 385290 0.70 387992 136 2810 380672 0.73 383482 137 2701 376106 0.71 378807 138 2641 371883 0.71 374524 139 2569 368250 0.69 370819 140 2517 361577 0.69 364094 141 2617 358699 0.72 361316 142 2534 352783 0.71 355317 143 2331 345243 0.67 347574 144 1946 327816 0.59 329762 145 1239 151267 0.81 152506