Sequence pairs analysed in total: 100000 Number of paired-end alignments with a unique best hit: 22721 Mapping efficiency: 22.7% Sequence pairs with no alignments under any condition: 72870 Sequence pairs did not map uniquely: 4409 Sequence pairs which were discarded because genomic sequence could not be extracted: 5 C methylated in CpG context: 75.8% C methylated in CHG context: 2.6% C methylated in CHH context: 3.0% C methylated in unknown context (CN or CHN): 42.7%