Module Section Sample Name Source Bismark alignment Tank2-025-026_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank2-025-026_R1_001_val_1_bismark_bt2_PE_report.txt Bismark alignment Tank3-15-16_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank3-15-16_R1_001_val_1_bismark_bt2_PE_report.txt Bismark deduplication Tank3-15-16_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank3-15-16_R1_001_val_1_bismark_bt2_pe.deduplication_report.txt Bismark deduplication Tank2-025-026_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank2-025-026_R1_001_val_1_bismark_bt2_pe.deduplication_report.txt Bismark methylation_extraction Tank2-025-026_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank2-025-026_R1_001_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt Bismark methylation_extraction Tank3-15-16_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank3-15-16_R1_001_val_1_bismark_bt2_pe.deduplicated_splitting_report.txt Bismark m_bias Tank3-15-16_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank3-15-16_R1_001_val_1_bismark_bt2_pe.deduplicated.M-bias.txt Bismark m_bias Tank2-025-026_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank2-025-026_R1_001_val_1_bismark_bt2_pe.deduplicated.M-bias.txt Cutadapt all_sections Tank3-15-16_R2_001 /gscratch/scrubbed/strigg/analyses/20200930/slurm-339925.out Cutadapt all_sections Tank2-025-026_R2_001 /gscratch/scrubbed/strigg/analyses/20200930/slurm-339925.out Cutadapt all_sections Tank2-025-026_R1_001 /gscratch/scrubbed/strigg/analyses/20200930/slurm-339925.out Cutadapt all_sections Tank3-15-16_R1_001 /gscratch/scrubbed/strigg/analyses/20200930/slurm-339925.out FastQC all_sections Tank2-025-026_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank2-025-026_R1_001_val_1_fastqc.zip FastQC all_sections Tank3-15-16_R2_001_val_2 /gscratch/scrubbed/strigg/analyses/20200930/Tank3-15-16_R2_001_val_2_fastqc.zip FastQC all_sections Tank3-15-16_R1_001_val_1 /gscratch/scrubbed/strigg/analyses/20200930/Tank3-15-16_R1_001_val_1_fastqc.zip FastQC all_sections Tank2-025-026_R2_001_val_2 /gscratch/scrubbed/strigg/analyses/20200930/Tank2-025-026_R2_001_val_2_fastqc.zip