Bowtie seems to be working fine (tested command '/gscratch/srlab/programs/bowtie2-2.3.5.1-linux-x86_64/bowtie2 --version' [2.3.5]) Output format is BAM (default) Alignments will be written out in BAM format. Samtools path provided as: '/gscratch/srlab/programs/samtools-1.9/samtools' Reference genome folder provided is /gscratch/srlab/strigg/data/Pgenr/OFS/ (absolute path is '/gscratch/srlab/strigg/data/Pgenr/OFS/)' FastQ format assumed (by default) Each Bowtie 2 instance is going to be run with 4 threads. Please monitor performance closely and tune down if needed! Input files to be analysed (in current folder '/gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3'): /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz Library is assumed to be strand-specific (directional), alignments to strands complementary to the original top or bottom strands will be ignored (i.e. not performed!) Output will be written into the directory: /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3/ Setting parallelization to single-threaded (default) Current working directory is: /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3 Now reading in and storing sequence information of the genome specified in: /gscratch/srlab/strigg/data/Pgenr/OFS/ chr Scaffold_01 (89643857 bp) chr Scaffold_02 (69596280 bp) chr Scaffold_03 (57743597 bp) chr Scaffold_04 (65288255 bp) chr Scaffold_05 (67248332 bp) chr Scaffold_06 (61759565 bp) chr Scaffold_07 (43120122 bp) chr Scaffold_08 (61151155 bp) chr Scaffold_09 (38581958 bp) chr Scaffold_10 (53961475 bp) chr Scaffold_11 (51449921 bp) chr Scaffold_12 (50438331 bp) chr Scaffold_13 (44396874 bp) chr Scaffold_14 (45393038 bp) chr Scaffold_15 (47938513 bp) chr Scaffold_16 (31980953 bp) chr Scaffold_17 (34923512 bp) chr Scaffold_18 (27737463 bp) Single-core mode: setting pid to 1 Paired-end alignments will be performed ======================================= The provided filenames for paired-end alignments are /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz and /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz Input files are in FastQ format Writing a C -> T converted version of the input file EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz to EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz_C_to_T.fastq Created C -> T converted version of the FastQ file EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz (24477306 sequences in total) Writing a G -> A converted version of the input file EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz to EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz_G_to_A.fastq Created G -> A converted version of the FastQ file EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz (24477306 sequences in total) Input files are EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz_C_to_T.fastq and EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz_G_to_A.fastq (FastQ) Now running 2 instances of Bowtie 2 against the bisulfite genome of /gscratch/srlab/strigg/data/Pgenr/OFS/ with the specified options: -q --score-min L,0,-0.6 -p 4 --reorder --ignore-quals --no-mixed --no-discordant --dovetail --maxins 500 Now starting a Bowtie 2 paired-end alignment for CTread1GAread2CTgenome (reading in sequences from EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz_C_to_T.fastq and EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz_G_to_A.fastq, with the options: -q --score-min L,0,-0.6 -p 4 --reorder --ignore-quals --no-mixed --no-discordant --dovetail --maxins 500 --norc)) Found first alignment: D00743:144:CAAWNANXX:2:2207:1666:2232_1:N:0:GATCAG/1 77 * 0 0 * * 0 0 GGGGATATGAATAATAAGTTTAATATTTAAGATGGAGAAGAAATAAGTGTAGAATTTTGGATAAAGGATAATTAAGTTAAT FFFFBFFBFFFFFFFFFFFFFFFFBFFFFFBFFF>> Writing bisulfite mapping results to EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam <<< Reading in the sequence files /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz and /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4833:4359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8778:6234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16048:7308_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7088:8835_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10867:11610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10867:11610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10867:11610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10867:11610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:5280:11954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:5280:11954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:5280:11954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:5280:11954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16341:11107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:1215:11391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20086:13015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14199:18622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14199:18622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14199:18622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14199:18622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10580:19273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11715:27121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11715:27121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11715:27121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11715:27121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:19696:27954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3151:29232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20273:33429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11825:35129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21175:38265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:6446:45358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:6446:45358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:6446:45358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:6446:45358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:20280:45400_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_1:N:0:GAACAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_2:N:0:GAACAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_1:N:0:GAACAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_2:N:0:GAACAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_1:N:0:GAACAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_2:N:0:GAACAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_1:N:0:GAACAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18574:46079_2:N:0:GAACAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:2807:46794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4226:48955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14948:49229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14948:49229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14948:49229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14948:49229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11101:49674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:21056:50531_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:3148:55590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:13422:55911_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:13422:55911_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:13422:55911_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:13422:55911_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15157:55827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8537:56256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8537:56256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8537:56256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8537:56256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:8271:59187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16205:59644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16205:59644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16205:59644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:16205:59644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:10176:67850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:12375:68988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:12375:68988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:12375:68988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:12375:68988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11760:71259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:7446:76412_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18774:76849_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18774:76849_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18774:76849_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18774:76849_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14392:82249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:11956:86657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15955:89799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15955:89799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15955:89799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:15955:89799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:14813:90113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4407:91108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4407:91108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4407:91108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:4407:91108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18607:94615_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18281:95471_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2207:18430:97013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4577:14332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9966:15932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15647:26312_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9952:29020_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20374:30175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8148:30867_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9284:30780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:11286:30901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:1216:39269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3446:40607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11873:42542_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11873:42542_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11873:42542_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:11873:42542_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7181:43049_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19557:44558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8990:47644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8990:47644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8990:47644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8990:47644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5151:55463_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5151:55463_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5151:55463_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5151:55463_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:8123:55928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6109:57548_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:19463:59302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15421:59858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:5138:60825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16632:62246_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9332:64313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:12553:67289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:18234:66815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17692:68039_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17569:74720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:4018:75744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:6738:76913_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:20953:79942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9420:81255_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9420:81255_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9420:81255_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9420:81255_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9932:90830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:2239:92393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:9933:93951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:3837:96662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:16025:98713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:17033:98667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15648:99215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15648:99215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15648:99215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:15648:99215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:7890:99315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_1:N:0:GCTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_1:N:0:GCTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_1:N:0:GCTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_1:N:0:GCTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2115:21206:101199_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:18096:8793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:18096:8793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:18096:8793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:18096:8793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17992:12063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17992:12063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17992:12063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17992:12063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15019:13677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15019:13677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15019:13677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15019:13677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12172:14891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12172:14891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12172:14891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12172:14891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13441:18599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11977:19900_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17849:20230_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17849:20230_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17849:20230_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17849:20230_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:17802:20680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7509:22525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7509:22525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7509:22525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7509:22525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6909:23286_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10928:24934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:5199:25017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9988:26638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10230:29688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4170:30465_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4170:30465_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4170:30465_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4170:30465_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6897:31784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:4110:32516_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11445:33570_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16722:37343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12473:38151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16468:38196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16550:39998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6148:43555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:14245:45243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:14245:45243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:14245:45243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:14245:45243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:11759:47504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6492:58255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10902:58493_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10902:58493_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10902:58493_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10902:58493_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:3124:61201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15846:63298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15846:63298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15846:63298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15846:63298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13284:65149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8797:65270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5600:66245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5600:66245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5600:66245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:5600:66245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1907:68653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12046:72718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:12817:72834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1337:74916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1337:74916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1337:74916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1337:74916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8554:76696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8554:76696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8554:76696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8554:76696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8077:78588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7398:80696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7398:80696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7398:80696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7398:80696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8920:81101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8920:81101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8920:81101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8920:81101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8021:81559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8021:81559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8021:81559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8021:81559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:6738:85174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11596:85998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11596:85998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11596:85998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:11596:85998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1930:87039_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1930:87039_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1930:87039_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1930:87039_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:15594:90231_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:21294:93728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:21294:93728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:21294:93728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:21294:93728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:14268:94191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:14268:94191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:14268:94191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:14268:94191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:7464:94811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8471:95427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8471:95427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8471:95427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:8471:95427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1237:96278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1237:96278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1237:96278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:1237:96278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:20323:97233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:10183:97279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:16967:97268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:9742:99223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2107:13715:101333_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7011:9578_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7011:9578_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7011:9578_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7011:9578_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:17530:10260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:7008:12806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9420:13378_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12562:18398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15522:25270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:3522:28662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2101:34712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6959:36267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5246:37189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:20507:37823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:8390:38390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:8390:38390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:8390:38390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:8390:38390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11680:38408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:2318:40714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5121:42817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9531:43666_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11054:45193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14660:45736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14660:45736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14660:45736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14660:45736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21280:48756_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21280:48756_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21280:48756_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21280:48756_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11694:52883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11694:52883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11694:52883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11694:52883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:10879:60474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:5449:60902_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9642:61419_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:15247:61744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:11330:61987_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6581:64434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:21085:68370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:13567:70252_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18367:72276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9325:73969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:6052:74999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12960:75204_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12960:75204_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12960:75204_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12960:75204_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:9579:77850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16030:81204_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18432:81372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18432:81372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18432:81372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18432:81372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12821:82205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12821:82205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12821:82205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12821:82205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4161:83082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4161:83082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4161:83082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4161:83082_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 1000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:12579:91927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:16763:95903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4690:100335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4690:100335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4690:100335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:4690:100335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:18152:101032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1315:14554:101360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15964:3310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18589:6200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18076:7896_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5196:9655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5196:9655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5196:9655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5196:9655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16549:16380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7416:18439_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9258:18635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9258:18635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9258:18635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9258:18635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15380:22851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15380:22851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15380:22851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15380:22851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5786:24151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9082:26997_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16642:32638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8556:34897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17597:35697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12782:36891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16958:38242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20881:38021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:1509:40065_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20128:42130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20128:42130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20128:42130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:20128:42130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14850:43386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14850:43386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14850:43386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14850:43386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:14307:48146_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7147:49362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7147:49362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7147:49362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7147:49362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:17230:53778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9921:54358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9921:54358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9921:54358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9921:54358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8741:56290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:10042:56684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:6827:59795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:6827:59795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:6827:59795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:6827:59795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5516:60981_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19473:61147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9508:63904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:18157:65365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:4303:65607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:4303:65607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:4303:65607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:4303:65607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19639:66549_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:19514:71082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2191:73043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:13388:76451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16911:76674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:15660:78029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12379:79551_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16860:83992_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:2941:84095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16564:84362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7297:85946_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7297:85946_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7297:85946_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:7297:85946_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:12520:91860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5376:92480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:9304:92918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:3746:96349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:3746:96349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:3746:96349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:3746:96349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:8022:96667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:5305:98424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1307:16111:98319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17624:99220_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17624:99220_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17624:99220_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1307:17624:99220_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17032:3587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17340:3925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4617:4218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4617:4218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4617:4218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4617:4218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18982:4128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7015:4376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7190:4573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7190:4573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7190:4573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7190:4573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4218:5451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4218:5451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4218:5451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4218:5451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8368:6933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4888:11911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19476:15574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:17627:21680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5582:22607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5582:22607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5582:22607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5582:22607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7999:26363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7999:26363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7999:26363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7999:26363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4453:28704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:8699:33891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3885:34725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:5977:35510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:7746:35907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13571:36252_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:4802:39108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9379:39729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10101:42623_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10934:42906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14068:44474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17388:46065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17388:46065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17388:46065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:17388:46065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:14370:47297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2146:53270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:16798:53460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:18825:56647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:1824:59209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9377:60076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12070:61498_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12070:61498_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12070:61498_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12070:61498_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:2738:62522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4761:63882_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4761:63882_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4761:63882_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:4761:63882_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:13046:68670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:9122:69029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10019:71978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:11298:73389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10161:75910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:19295:84111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3717:90980_2:N:0:GATCAT/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3717:90980_2:N:0:GATCAT/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3717:90980_2:N:0:GATCAT/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3717:90980_2:N:0:GATCAT/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:3610:92592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:12496:94982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1215:10967:98348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9826:2391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15532:4445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17132:7302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2276:9547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2276:9547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2276:9547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2276:9547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20818:13880_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19713:14122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:19013:15012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13818:18860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9501:19855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9501:19855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9501:19855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9501:19855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17684:21062_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13501:22498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8995:23064_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8995:23064_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8995:23064_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8995:23064_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18389:24362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:13248:29189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15528:32490_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15528:32490_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15528:32490_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15528:32490_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16306:41740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3043:43376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6485:45999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6485:45999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6485:45999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6485:45999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16981:46818_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16981:46818_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16981:46818_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16981:46818_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16495:47211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16495:47211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16495:47211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16495:47211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14814:47566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16995:47862_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2997:51995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2997:51995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2997:51995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2997:51995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3376:56848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2685:57568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:20591:60468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6714:61842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16098:63702_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16098:63702_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16098:63702_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16098:63702_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9132:67402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2521:73943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:21252:74827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18883:76040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18883:76040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18883:76040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:18883:76040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:17507:80375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6699:81495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6463:81828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6463:81828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6463:81828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6463:81828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:16993:82377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8338:82618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:6878:83690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:7638:86483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:11096:88316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:8492:88802_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:3978:91235_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:4941:92320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:4941:92320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:4941:92320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:4941:92320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:2401:92501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14079:93669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14079:93669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14079:93669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:14079:93669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:10648:99487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:10648:99487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:10648:99487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:10648:99487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:15929:100005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9201:101328_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9201:101328_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9201:101328_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1207:9201:101328_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6018:4427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4250:5434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:5686:9669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18040:20575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:19883:21149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20076:21544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20401:22667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2857:24681_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13484:29096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:7948:29393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10161:29797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2281:38298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4285:38280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18723:39899_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:10940:43737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12305:44113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2406:46696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:17859:46358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18513:48350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18200:48632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7445:52411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7445:52411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7445:52411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:7445:52411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:6504:52137_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9835:56689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16808:56629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:2310:59148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:11807:59643_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:3681:60281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8544:60269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8924:61799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12761:66324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:4016:66573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16939:70129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14671:70525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8315:72601_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8315:72601_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8315:72601_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8315:72601_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12531:73543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:20925:76240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18453:80213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18453:80213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18453:80213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18453:80213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13418:80431_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 2000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9054:86558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13693:88210_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13693:88210_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13693:88210_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:13693:88210_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:15302:88416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12469:91667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:16718:92232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14145:93416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:8439:93575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:14993:93590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:18822:97693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9925:98547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9925:98547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9925:98547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:9925:98547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1115:12367:98571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7054:3216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13724:3184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19677:3367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4676:3654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15226:4690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13973:5535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14269:10683_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6203:17289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9599:18350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:16965:19338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:16965:19338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:16965:19338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:16965:19338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4419:20949_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4419:20949_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4419:20949_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4419:20949_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12931:21582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12931:21582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12931:21582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12931:21582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15178:24256_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13336:26386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:20493:26727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15645:27020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17947:27307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17947:27307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17947:27307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17947:27307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4607:28821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:13261:38110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17344:41576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19794:41829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:9198:43905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19906:43816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19716:45864_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8516:51584_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8516:51584_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8516:51584_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8516:51584_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11180:56343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:6628:57019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4115:59415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4115:59415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4115:59415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4115:59415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3873:60281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3873:60281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3873:60281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3873:60281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:8763:62593_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4695:65072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10306:65466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:14578:66654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10420:67210_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10420:67210_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10420:67210_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10420:67210_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:18355:68629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15192:69076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15192:69076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15192:69076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15192:69076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15949:70792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7320:71699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:15194:74586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12936:75295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12936:75295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12936:75295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:12936:75295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5683:76894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:5241:78650_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:7322:79143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11288:85826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:10549:89005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19342:92442_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19342:92442_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19342:92442_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:19342:92442_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:2235:96955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13233:96942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13233:96942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13233:96942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:13233:96942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:11266:97175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:17264:97481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3118:98379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3118:98379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3118:98379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:3118:98379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1107:4388:99710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20547:6152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7484:8232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16364:13010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18572:15914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18505:16724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18505:16724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18505:16724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18505:16724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8493:18653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1196:21494_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:5441:22315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8120:22336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9581:22324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:7192:27209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8929:34156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16650:36622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9649:40368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:6131:41142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14523:41601_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14523:41601_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14523:41601_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14523:41601_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20496:43423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:20797:44936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9647:45574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3606:45799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14220:48981_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8799:49138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17176:65854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14872:70215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14872:70215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14872:70215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:14872:70215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9475:71047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:4189:70765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:4189:70765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:4189:70765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:4189:70765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17707:75336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18990:76191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:1853:77019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17416:79197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16695:81432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16765:81557_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:8399:83615_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:3936:85773_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:18005:88455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:16094:90657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:15079:92377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:15079:92377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:15079:92377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:15079:92377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:17455:93784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2215:9026:96483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8412:97410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8412:97410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8412:97410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2215:8412:97410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4543:5103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17703:9673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17703:9673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17703:9673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17703:9673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17626:10104_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3867:10784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17026:14982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:5974:17603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13835:23733_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15320:24316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18939:25646_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6898:31106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:7750:32200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15947:35484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15947:35484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15947:35484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15947:35484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15739:35960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19416:36640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:1312:37250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11613:38536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11613:38536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11613:38536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11613:38536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8816:40825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15330:41874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20926:42059_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20926:42059_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20926:42059_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20926:42059_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:8469:42458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13360:50222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18960:52398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17513:53790_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17513:53790_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17513:53790_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:17513:53790_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15162:54704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15162:54704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15162:54704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15162:54704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3576:55939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3555:57219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:19524:58029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:11398:59674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20252:62410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:16282:69750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:16282:69750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:16282:69750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:16282:69750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:9723:74080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:9723:74080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:9723:74080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:9723:74080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:10944:74541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:13780:77060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4867:77252_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4867:77252_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4867:77252_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4867:77252_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:14665:77717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3360:78932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:2841:83886_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:4013:85500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:12249:86057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:6585:89040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3764:89640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3764:89640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3764:89640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3764:89640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:15796:90754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:18912:91398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:3041:95631_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20181:97426_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20181:97426_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20181:97426_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2307:20181:97426_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12963:2397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3518:2598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7858:6934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7858:6934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7858:6934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7858:6934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15954:9006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4884:9601_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:2454:11124_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3584:14718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17621:14857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11893:15408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17335:16197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17335:16197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17335:16197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17335:16197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20541:16043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20208:16744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20208:16744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20208:16744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20208:16744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17931:20234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11056:21476_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11056:21476_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11056:21476_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11056:21476_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:15227:23795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:13905:27076_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:13905:27076_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:13905:27076_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:13905:27076_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21252:29193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20272:31357_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9092:33440_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9646:34529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:5373:38858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:5373:38858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:5373:38858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:5373:38858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17332:40067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17801:42156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17801:42156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17801:42156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17801:42156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:4198:44955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8018:44921_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3562:47225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9842:50848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:16922:51179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:8342:54380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17003:56825_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17003:56825_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17003:56825_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17003:56825_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10518:61238_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:17829:61619_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:14482:61829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18845:62841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:12691:63709_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18467:66337_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 3000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:1815:70072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:6998:74713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:6998:74713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:6998:74713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:6998:74713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3899:79186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:10781:80628_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20762:85281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20762:85281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20762:85281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20762:85281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:7301:85530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14996:86862_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14996:86862_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14996:86862_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:14996:86862_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:18117:86853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:20862:86840_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:9367:87748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:19834:90710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:19834:90710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:19834:90710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:19834:90710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3437:94284_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21296:95224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21296:95224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21296:95224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:21296:95224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:3502:99354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2315:11607:99691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6006:2304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6006:2304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6006:2304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6006:2304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11421:4496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12365:5385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12540:6005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14739:6689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8162:8224_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8162:8224_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8162:8224_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8162:8224_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18767:9092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12155:13478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10823:15310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10823:15310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10823:15310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10823:15310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16291:18951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6890:19510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11154:19806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11154:19806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11154:19806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11154:19806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:6872:27208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2595:27536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9176:28748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14525:32144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:18207:33990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9233:38990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9233:38990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9233:38990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9233:38990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7762:44832_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7762:44832_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7762:44832_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7762:44832_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15933:47940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15933:47940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15933:47940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15933:47940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16382:48689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:9602:52044_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2354:52912_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11207:55417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16186:55405_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2627:55846_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12419:57241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12089:57475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19673:58004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5548:58447_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8516:61455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12282:61978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13531:61815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13531:61815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13531:61815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13531:61815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2506:64733_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12469:64716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2652:65287_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2652:65287_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2652:65287_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2652:65287_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10465:67830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10465:67830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10465:67830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:10465:67830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19207:68982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19207:68982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19207:68982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:19207:68982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5784:70814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5784:70814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5784:70814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:5784:70814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:15637:71388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14297:72042_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16718:74790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12973:77113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12973:77113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12973:77113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:12973:77113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13718:77834_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13718:77834_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13718:77834_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:13718:77834_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:16707:77888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:17884:80726_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:17884:80726_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:17884:80726_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:17884:80726_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:21304:82759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:21304:82759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:21304:82759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:21304:82759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:7949:84254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14661:85219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14661:85219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14661:85219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:14661:85219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:20324:85856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8128:96910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11249:97133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11249:97133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11249:97133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:11249:97133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:2680:97610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2732:101227_1:N:0:GATCAT/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2732:101227_1:N:0:GATCAT/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2732:101227_1:N:0:GATCAT/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:2732:101227_1:N:0:GATCAT/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2201:8840:101053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17422:5351_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17422:5351_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17422:5351_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17422:5351_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11795:6393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7293:7200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2908:7707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5418:9823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13574:10841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19455:11112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9196:11768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9196:11768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9196:11768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9196:11768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:17517:12350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16763:16931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16763:16931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16763:16931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16763:16931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8132:17327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14133:17557_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5113:18254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5113:18254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5113:18254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5113:18254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:4551:18566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2728:20972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2728:20972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2728:20972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2728:20972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:19754:24943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:7533:25498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20255:25723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2004:28147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9729:31558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10524:38734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15417:39534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16493:39565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9781:47159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9781:47159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9781:47159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9781:47159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18957:46703_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18957:46703_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18957:46703_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18957:46703_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8032:46755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8032:46755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8032:46755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:8032:46755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10959:50169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6958:51831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15002:52963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15002:52963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15002:52963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15002:52963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14034:53035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9181:55939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9181:55939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9181:55939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9181:55939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:14097:57856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12148:58919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:5931:61744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9973:62010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9973:62010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9973:62010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9973:62010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20554:63222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11743:64174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16276:64976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16276:64976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16276:64976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:16276:64976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9075:65729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9075:65729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9075:65729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:9075:65729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6733:65999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6733:65999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6733:65999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6733:65999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10351:69360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10576:70122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10576:70122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10576:70122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:10576:70122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:20010:71430_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12476:71888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12476:71888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12476:71888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:12476:71888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1639:74826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1639:74826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1639:74826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1639:74826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:3065:80209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:1613:80452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11824:82673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9328:85292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9328:85292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9328:85292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:9328:85292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:15382:85904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:11306:88409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6444:87834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:18448:89249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12206:92377_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12206:92377_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12206:92377_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:12206:92377_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2406:93691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2406:93691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2406:93691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:2406:93691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13156:98074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13156:98074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13156:98074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:13156:98074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2202:6168:101335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16931:6903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16931:6903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16931:6903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16931:6903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5335:7155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9334:7847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9334:7847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9334:7847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9334:7847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11609:9462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6675:10095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7694:10710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20455:11546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14397:12051_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14397:12051_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14397:12051_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14397:12051_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15572:14980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17750:14821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17750:14821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17750:14821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17750:14821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17605:15820_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6716:19212_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6716:19212_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6716:19212_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6716:19212_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20031:21077_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20031:21077_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20031:21077_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:20031:21077_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18724:21642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18724:21642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18724:21642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18724:21642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15147:22183_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4912:23105_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:1943:23591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20488:24771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20488:24771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20488:24771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20488:24771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:14216:31450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2281:34869_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4960:35743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4960:35743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4960:35743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4960:35743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11704:35766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8324:37096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8324:37096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8324:37096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8324:37096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8950:39386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16014:42414_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12814:43438_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12814:43438_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12814:43438_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12814:43438_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17718:43457_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:5018:44358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2282:46265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2282:46265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2282:46265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2282:46265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17730:47547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17645:48893_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9550:50253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18613:52572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18613:52572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18613:52572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18613:52572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:3450:54025_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:3450:54025_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:3450:54025_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:3450:54025_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:11227:54552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:7653:55097_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_1:N:0:GATCAT/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_2:N:0:GATCAT/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_1:N:0:GATCAT/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_2:N:0:GATCAT/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_1:N:0:GATCAT/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_2:N:0:GATCAT/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_1:N:0:GATCAT/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9948:56598_2:N:0:GATCAT/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12010:56895_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12010:56895_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12010:56895_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:12010:56895_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6717:57041_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6717:57041_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6717:57041_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:6717:57041_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9684:59539_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10293:60767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:2029:67627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16047:68617_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15723:69428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15723:69428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15723:69428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:15723:69428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8006:70306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16067:76488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16997:77219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16997:77219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16997:77219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16997:77219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17308:84313_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20067:85131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20067:85131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20067:85131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:20067:85131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10938:87070_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10938:87070_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10938:87070_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10938:87070_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14467:87114_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14467:87114_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14467:87114_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:14467:87114_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:17438:88331_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10821:89006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10821:89006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10821:89006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10821:89006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17243:89287_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17243:89287_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17243:89287_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:17243:89287_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:3692:90823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:3692:90823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:3692:90823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:3692:90823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4568:90826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19440:92371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19440:92371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19440:92371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19440:92371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10103:95091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10103:95091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10103:95091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:10103:95091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:19211:95655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:8109:96231_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4289:97317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:9781:97474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8434:98348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8434:98348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8434:98348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:8434:98348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:4729:98552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16157:99276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16157:99276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16157:99276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:16157:99276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18900:101087_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2203:18795:101168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7962:5943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1984:8264_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7622:12116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7622:12116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7622:12116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7622:12116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18075:12332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6261:13157_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7889:13991_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7889:13991_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7889:13991_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7889:13991_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6696:13906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6696:13906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6696:13906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6696:13906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20644:15878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20644:15878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20644:15878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20644:15878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20435:16548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19292:18609_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19292:18609_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19292:18609_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19292:18609_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_1:N:0:GATGAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_2:N:0:GATGAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_1:N:0:GATGAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_2:N:0:GATGAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_1:N:0:GATGAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_2:N:0:GATGAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_1:N:0:GATGAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7564:19417_2:N:0:GATGAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5326:19633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19849:23108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19849:23108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19849:23108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:19849:23108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16319:28780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18335:30473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4108:32871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10088:32863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1260:34044_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17977:37941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4780:38735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5984:38914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8312:39545_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8312:39545_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8312:39545_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8312:39545_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18132:39751_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18132:39751_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17386:39942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18132:39751_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18132:39751_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11354:42976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20332:45602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11275:45977_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18647:46156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18647:46156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18647:46156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18647:46156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16690:50591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16690:50591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16690:50591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16690:50591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20500:50562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20500:50562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21311:50528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21311:50528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20500:50562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20500:50562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21311:50528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21311:50528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3742:51602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3742:51602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3742:51602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3742:51602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4819:52759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4819:52759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4819:52759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:4819:52759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18782:57459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3665:57666_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8121:57906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:15119:57782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10004:58279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10004:58279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10004:58279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:10004:58279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13820:58343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:3885:59614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7845:61857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7845:61857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7845:61857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7845:61857_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 4000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2736:62320_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:1490:63115_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20783:63898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20783:63898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20783:63898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20783:63898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10404:64538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10404:64538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10404:64538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:10404:64538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8570:64783_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8570:64783_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8570:64783_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8570:64783_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:14440:66237_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8742:70709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17763:75566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21310:76445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21310:76445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21310:76445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:21310:76445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16959:77788_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16959:77788_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16959:77788_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:16959:77788_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7835:80885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:8749:81194_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:6482:82173_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11912:84028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11912:84028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11912:84028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:11912:84028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:17070:86138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13295:86862_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13293:87662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13293:87662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13293:87662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:13293:87662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18234:91518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1964:92586_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1964:92586_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1964:92586_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:1964:92586_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:20393:95467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2526:95576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5296:97488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5296:97488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5296:97488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:5296:97488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18467:97345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18467:97345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18467:97345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:18467:97345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:7943:100270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2205:2769:101387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3094:2325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3094:2325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3094:2325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3094:2325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:9583:2596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8046:3870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4390:4844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20904:8057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17299:18468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2255:19260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:5275:21189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:5275:21189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:5275:21189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:5275:21189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18772:23785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18772:23785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18772:23785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18772:23785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17106:28031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17106:28031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17106:28031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17106:28031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:10220:28505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21185:30370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:21218:32422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18355:33394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16085:34974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16085:34974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16085:34974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16085:34974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20022:35113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20022:35113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20022:35113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20022:35113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12766:41054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18356:42482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:7858:43792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:3395:49481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17519:50680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6938:53941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6938:53941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6938:53941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6938:53941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4769:54129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13047:56418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:14663:56849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:12641:60472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:19289:60445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15258:60548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16143:61050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:13718:66443_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17575:66768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4713:68184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4713:68184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4713:68184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:4713:68184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:2658:69537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17292:74258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:15095:75671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:8134:81688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5605:88434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5605:88434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5605:88434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5605:88434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16808:89736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16808:89736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16808:89736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:16808:89736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6408:91911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6408:91911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6408:91911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:6408:91911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:17689:93597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5144:94396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5144:94396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5144:94396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:5144:94396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:20034:95910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:18071:98883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16139:99027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16139:99027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16139:99027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2109:16139:99027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19725:4616_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8939:10694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11344:10568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11344:10568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11344:10568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11344:10568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17487:12477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16775:16678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7821:16934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6034:17734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8131:17738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12678:18640_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10466:24629_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8740:25203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8740:25203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8740:25203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8740:25203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11410:28055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17768:28467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17768:28467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17768:28467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17768:28467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15822:28698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1294:30768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19391:31882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19391:31882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19391:31882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19391:31882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6469:34131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6469:34131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6469:34131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6469:34131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12403:36888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4670:41076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:8355:43040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13336:43665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:13370:44711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6534:48743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4072:50075_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6058:50402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1632:62094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:7730:62084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12021:62517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:2200:67939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12382:69212_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4500:69677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19202:69578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:9899:71788_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11957:71782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11957:71782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11957:71782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11957:71782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14981:73474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14158:75588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14158:75588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14158:75588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:14158:75588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15190:76210_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15190:76210_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15190:76210_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15190:76210_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6594:76780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10423:77420_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10423:77420_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10423:77420_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10423:77420_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:1503:78222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:17282:78112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:21093:78091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11421:80336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15726:84120_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11100:85151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11100:85151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11100:85151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11100:85151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:5910:86478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:6194:86266_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19330:86969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19330:86969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19330:86969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19330:86969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:15728:87102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12776:87305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11834:89550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:19816:92297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:10673:93213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:16939:94423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:12087:96628_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11428:100187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11428:100187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11428:100187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:11428:100187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4401:100596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4401:100596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4401:100596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2208:4401:100596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15997:3928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20660:5649_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11852:7228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11852:7228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11852:7228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11852:7228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19370:7019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19370:7019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19370:7019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19370:7019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2157:8092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12756:10825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12756:10825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12756:10825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12756:10825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20326:10794_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12491:11844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:11522:12859_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14000:18887_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2781:20317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7315:20354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20040:20465_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20040:20465_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20040:20465_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:20040:20465_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:13607:20786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6292:22772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9483:30740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9483:30740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9483:30740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9483:30740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19497:31849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3857:33797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3857:33797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3857:33797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3857:33797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12957:34670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12957:34670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12957:34670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12957:34670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6568:43262_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6568:43262_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6568:43262_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6568:43262_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:16039:45088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:10312:45676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9350:45868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9350:45868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9350:45868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:9350:45868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15139:47557_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:15960:48491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:4680:50071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6882:50687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3620:53007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:19977:56777_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:5489:60574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12351:61089_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:6529:61878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:2229:67478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:21008:68900_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14340:78356_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14340:78356_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14340:78356_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14340:78356_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:7936:83056_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14600:90352_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14600:90352_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14600:90352_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14600:90352_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:3218:91395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:14386:94027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12651:99932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12651:99932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12651:99932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2110:12651:99932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16607:5341_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14258:5582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13580:9353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7337:12203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7430:13358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10534:13536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_1:N:0:GATCCG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_1:N:0:GATCCG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_1:N:0:GATCCG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_1:N:0:GATCCG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7237:13910_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3639:16979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3639:16979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3639:16979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3639:16979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6802:17979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13470:18156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:4188:21177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6703:24366_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10438:27970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12795:28662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12795:28662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12795:28662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12795:28662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:21203:28573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:21203:28573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:21203:28573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:21203:28573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:6192:29165_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13270:29240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13270:29240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13270:29240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13270:29240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:17075:30147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:17075:30147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:17075:30147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:17075:30147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12500:34643_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21311:34724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21311:34724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21311:34724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21311:34724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:20274:40022_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:20274:40022_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:20274:40022_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:20274:40022_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18205:40633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8656:42082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16011:45953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:2371:46989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:2371:46989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:2371:46989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:2371:46989_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 5000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11826:54418_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5090:58129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5090:58129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5090:58129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5090:58129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:10127:58374_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14060:59215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19875:59134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12130:59648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12130:59648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12130:59648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12130:59648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3080:61849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9558:62365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3902:65141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21312:65583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21312:65583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21312:65583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21312:65583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18834:66168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18834:66168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18834:66168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:18834:66168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:12017:68111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:16427:68743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14770:70340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5328:77093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15306:78120_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:3302:78380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:7250:78727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11700:79698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11594:85285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13823:85586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13823:85586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13823:85586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:13823:85586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19580:88322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9362:89258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9362:89258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9362:89258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:9362:89258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21313:89561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21313:89561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21313:89561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:21313:89561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19212:89948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:8801:91149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:5132:91432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:11750:91998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14704:95623_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:1891:96071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:1891:96071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:1891:96071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:1891:96071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15760:96951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15760:96951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15760:96951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:15760:96951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:19161:98200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:14289:98951_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9673:101228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9673:101228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9673:101228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2206:9673:101228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2888:2882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16762:13720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16762:13720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16762:13720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16762:13720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10628:13960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9872:14033_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2492:15927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4430:17838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:2868:18870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18372:18940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10900:20070_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10900:20070_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10900:20070_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10900:20070_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15425:30731_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16277:34402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16277:34402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16277:34402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16277:34402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15007:37115_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15007:37115_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15007:37115_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15007:37115_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8307:38392_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11490:38409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12908:39586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:16916:40298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12588:43108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12588:43108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12588:43108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12588:43108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8651:45284_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8651:45284_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8651:45284_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:8651:45284_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5274:46457_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5274:46457_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5274:46457_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5274:46457_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12281:46857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20812:51332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20103:55135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12027:56741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12027:56741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12027:56741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:12027:56741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18146:58088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18146:58088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18146:58088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:18146:58088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:4820:59408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21309:60013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21309:60013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21309:60013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21309:60013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5646:62878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:1505:64045_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:7521:68585_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:7521:68585_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:7521:68585_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:7521:68585_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5275:71420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5275:71420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5275:71420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5275:71420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:10954:76798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6157:77101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3884:79214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5204:79309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:15822:79778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:6255:80383_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13048:80367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:9953:82033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17048:85336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:14305:89907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:14305:89907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:14305:89907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:14305:89907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20084:90433_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20084:90433_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20084:90433_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:20084:90433_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21298:91516_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21298:91516_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21298:91516_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:21298:91516_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:19862:91972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:19862:91972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:19862:91972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:19862:91972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:17770:93068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:11428:93554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:13876:95119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:3736:95870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5368:101209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5368:101209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5368:101209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2204:5368:101209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10178:2613_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16591:2967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20057:10711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20057:10711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20057:10711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20057:10711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14647:17504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14709:18177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10721:18309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17589:20999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17132:23068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:4066:25402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13736:27388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7880:28989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:6762:29081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19350:30916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10053:33755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10053:33755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10053:33755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:10053:33755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11476:34226_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14570:37294_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14570:37294_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14570:37294_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14570:37294_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:8783:40015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:8783:40015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:8783:40015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:8783:40015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19666:45811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19666:45811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19666:45811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19666:45811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9004:50117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5298:50309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20414:51341_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20414:51341_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20414:51341_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20414:51341_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:15332:53256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:18981:56871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3131:58767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3131:58767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3131:58767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3131:58767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17970:58753_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17970:58753_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17970:58753_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:17970:58753_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14330:61123_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14330:61123_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14330:61123_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14330:61123_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:14485:63556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9463:65565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9463:65565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9463:65565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9463:65565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20196:65814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20196:65814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20196:65814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20196:65814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16611:66915_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16611:66915_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16611:66915_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:16611:66915_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12603:67395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5218:68427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19280:68588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19280:68588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19280:68588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19280:68588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20562:73144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3698:73811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13899:74080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:2981:80366_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:2981:80366_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:2981:80366_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:2981:80366_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:9208:81377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:11501:81346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:7910:83800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:3179:85380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:19258:86281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5593:87593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:12853:93358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5847:96129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5496:96396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5496:96396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5496:96396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:5496:96396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20225:98166_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:13310:100423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2111:20556:100877_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2776:3136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20352:3011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19006:7430_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10618:8035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17937:8871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15220:10078_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4831:18035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4831:18035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4831:18035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4831:18035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19803:22994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6206:26937_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2341:29916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12124:30630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14923:33456_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14923:33456_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14923:33456_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14923:33456_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:18425:34835_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11937:36333_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19360:37329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20583:39676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5206:42658_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5271:42947_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7470:44692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19198:47460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14169:48197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3288:48855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3288:48855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3288:48855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3288:48855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:4232:50346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5763:51025_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5763:51025_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5763:51025_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:5763:51025_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_1:N:0:GAACAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_2:N:0:GAACAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_1:N:0:GAACAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_2:N:0:GAACAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_1:N:0:GAACAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_2:N:0:GAACAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_1:N:0:GAACAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:20887:51196_2:N:0:GAACAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2938:54077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1253:54311_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1253:54311_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1253:54311_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1253:54311_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14830:56787_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:2860:58638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6031:60480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6031:60480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6031:60480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:6031:60480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:3448:60760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7874:64199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9673:64975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:17869:65794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:10486:67061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:13286:80912_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:13286:80912_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:13286:80912_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:13286:80912_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:1713:83445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:7570:83291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12620:87368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12620:87368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12620:87368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:12620:87368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:9227:91700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15658:95263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15658:95263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15658:95263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:15658:95263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:14855:96468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:16685:97285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:11652:99266_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2113:19528:99276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3047:2800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8082:4209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10411:7697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17796:9159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20192:12662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7778:13739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7778:13739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7778:13739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7778:13739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19414:14486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3488:16024_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11953:20147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8785:25006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8340:26458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16358:28459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20492:28984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18029:31612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18029:31612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18029:31612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18029:31612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18293:31931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10459:33529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3108:33975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18726:36677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18726:36677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18726:36677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:18726:36677_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 6000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:15204:40042_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9010:42898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1484:44149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1484:44149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1484:44149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1484:44149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10218:44289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10218:44289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10218:44289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10218:44289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:6969:49096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:21270:49944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1427:50359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1427:50359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1427:50359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:1427:50359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8291:51423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8546:52728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8546:52728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8546:52728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8546:52728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2011:54349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13513:54487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13513:54487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13513:54487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13513:54487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7996:56535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:16127:58172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12260:58933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12260:58933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12260:58933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12260:58933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2805:62088_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20198:62614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16369:66955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16369:66955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16369:66955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:16369:66955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17666:68104_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17666:68104_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17666:68104_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:17666:68104_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8234:71590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8234:71590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8234:71590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:8234:71590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2572:71877_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2572:71877_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2572:71877_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:2572:71877_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:20981:72074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:13813:76310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12535:80784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12535:80784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12535:80784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:12535:80784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:14490:84525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10895:86336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10895:86336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10895:86336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:10895:86336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9272:86568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:9995:87005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:7479:87709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5622:92791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2367:95645_1:N:0:GATCAT/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2367:95645_1:N:0:GATCAT/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2367:95645_1:N:0:GATCAT/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:2367:95645_1:N:0:GATCAT/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:19904:98338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:3724:98508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:11217:98993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2101:5227:99560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:15597:2347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17170:5606_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16555:6655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9437:10504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11444:11513_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11444:11513_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11444:11513_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11444:11513_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14038:13978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14038:13978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14038:13978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14038:13978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18135:14098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2197:17245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9810:18620_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9796:21029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3751:24282_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3776:25945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6056:26574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2949:30459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2949:30459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2949:30459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2949:30459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8431:30636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9618:30738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14435:31714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3996:33909_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3996:33909_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3996:33909_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:3996:33909_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12974:36310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8934:40084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8808:45227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14275:48043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:18298:48153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7641:49685_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7641:49685_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7641:49685_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7641:49685_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:11733:49510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13001:52890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:2425:57143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12484:57961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17409:58559_2:N:0:GATCAT/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17409:58559_2:N:0:GATCAT/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17409:58559_2:N:0:GATCAT/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17409:58559_2:N:0:GATCAT/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17120:60066_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17120:60066_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17120:60066_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:17120:60066_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9635:60497_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14360:60727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14360:60727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14360:60727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14360:60727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12576:67464_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19322:67486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:20266:67831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:8528:68415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:4875:71009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:12742:71380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:13415:71927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7141:72778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7141:72778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7141:72778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7141:72778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16410:75120_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19162:77193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19162:77193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19162:77193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19162:77193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7817:78118_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7817:78118_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7817:78118_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7817:78118_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19227:82053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:5995:83128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:14961:83404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:16534:83506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:6139:86477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:10949:87810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:7468:88343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:9910:96407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2116:19569:97236_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13841:5498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13841:5498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13841:5498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13841:5498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1238:6881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1238:6881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1238:6881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1238:6881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7201:7843_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7201:7843_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7201:7843_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7201:7843_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17967:11458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8327:12059_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8327:12059_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8327:12059_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8327:12059_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17141:13757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12629:14942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18142:15560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1533:15868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:3020:19148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13591:20916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13591:20916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13591:20916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13591:20916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10036:24624_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10895:25308_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10895:25308_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10895:25308_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:10895:25308_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2481:26499_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:8898:29162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6285:29598_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6285:29598_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6285:29598_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6285:29598_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13299:32209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:6641:33924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14576:35700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14576:35700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14576:35700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14576:35700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10838:38599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10838:38599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10838:38599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:10838:38599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11356:39138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7302:39874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18273:43669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9175:44296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12757:44696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12757:44696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12757:44696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:12757:44696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15777:48385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18327:49960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:20539:51410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17745:52618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7096:52917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7096:52917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7096:52917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7096:52917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:11171:54715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18804:58015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18804:58015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18804:58015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18804:58015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15227:63549_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:2216:67180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13164:67924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:17904:70544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4160:71227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9980:71747_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9980:71747_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9980:71747_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9980:71747_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19284:74030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19284:74030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19284:74030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19284:74030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:14267:74529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:18286:76668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7844:76145_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7844:76145_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7844:76145_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7844:76145_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13178:80172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13178:80172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13178:80172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:13178:80172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9688:81177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9688:81177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9688:81177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9688:81177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19841:86271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9470:87797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:4379:90565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:1195:93688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9379:95362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9379:95362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9379:95362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:9379:95362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11695:95670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11695:95670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11695:95670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11695:95670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7499:96451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11203:96647_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11203:96647_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11203:96647_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:11203:96647_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:5097:97401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:5097:97401_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:5097:97401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:5097:97401_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19940:99829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19940:99829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19940:99829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:19940:99829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7244:100789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7244:100789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7244:100789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:7244:100789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2102:15632:100881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11061:2475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11061:2475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11061:2475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11061:2475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:8759:3083_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:3394:7101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18446:8798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10270:10614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11446:10874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19848:11275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14262:13634_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17775:18355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15672:21225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14773:26740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:1421:26955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7697:27647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11791:27797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11791:27797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11791:27797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11791:27797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5103:30622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2232:31093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:19508:31452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17070:31271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4801:32355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9396:34567_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12403:34916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2340:37784_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9945:38777_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14169:41694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14340:43170_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2667:43289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18204:45640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18204:45640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18204:45640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:18204:45640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4499:49130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4499:49130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4499:49130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4499:49130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5050:50971_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5050:50971_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5050:50971_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:5050:50971_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15196:51814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:10747:54111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:7222:57886_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14487:57852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9485:60830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9485:60830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9485:60830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9485:60830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20263:62001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:9500:64423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4698:69121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20749:69775_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:14364:70881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:20472:71713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:11476:73149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12644:78140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15720:81669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:2726:81981_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:16271:87295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:6173:89614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:6173:89614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:6173:89614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:6173:89614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15382:90745_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15382:90745_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15382:90745_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:15382:90745_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:17930:95796_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:12933:97489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2114:4964:99054_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16335:2764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20722:5431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14823:9676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20565:10627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3856:12009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20413:14344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18193:14718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2656:15054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:18770:16695_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15284:16907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10016:17011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2265:17398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13308:18762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13916:21984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13916:21984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13916:21984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13916:21984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:7985:24460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8626:24317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2315:24865_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15985:26343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16936:28961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16936:28961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16936:28961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16936:28961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17292:29742_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17292:29742_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17292:29742_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17292:29742_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 7000000 sequence pairs so far Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17306:34567_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17306:34567_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17306:34567_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17306:34567_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1290:42856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10777:43001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20800:43710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9721:44263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8799:44672_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8799:44672_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8799:44672_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8799:44672_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11158:45457_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11360:48151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11360:48151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11360:48151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11360:48151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12876:48559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:5827:53117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11786:57232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11786:57232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11786:57232_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11786:57232_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8744:57704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:2393:59432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4912:63555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8831:65985_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3006:67960_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:6613:70215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9339:72450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9339:72450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9339:72450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9339:72450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:16864:72620_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3480:73884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12938:75718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12160:79636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12160:79636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11578:79652_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12160:79636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:12160:79636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11930:80191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:4689:80833_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:8095:82521_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10449:83794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:10373:85450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15954:87759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15954:87759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15954:87759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:15954:87759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:17181:87905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:11582:88047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:3965:90783_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11880:91861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11880:91861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11880:91861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:11880:91861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:1526:93297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14248:93471_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:20561:93586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:14071:93774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:9083:94994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13448:95261_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13448:95261_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13448:95261_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2112:13448:95261_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4832:4446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11493:5359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2429:8437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6848:9506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_1:N:0:GATCCG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_1:N:0:GATCCG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_1:N:0:GATCCG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_1:N:0:GATCCG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14552:9852_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10408:10594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:20713:12871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17079:15251_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6978:18102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6978:18102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6978:18102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6978:18102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11005:18861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11005:18861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11005:18861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:11005:18861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:19484:22716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:19484:22716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:19484:22716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:19484:22716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8402:25206_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8402:25206_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8402:25206_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8402:25206_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2958:25388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4546:37868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4546:37868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4546:37868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:4546:37868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17436:38117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:16047:40410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17069:40990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6018:42174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9430:43281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9430:43281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9430:43281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9430:43281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6272:44162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12415:47487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17181:47998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17181:47998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17181:47998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:17181:47998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2653:48009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6180:49193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:15058:50752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:12360:51687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:9837:57082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1296:58728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3997:59711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17349:60817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17349:60817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17349:60817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:17349:60817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13915:61821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2506:63830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8882:66179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8882:66179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8882:66179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8882:66179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1615:70496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10739:70828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10739:70828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10739:70828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:10739:70828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:14554:71301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1817:73123_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1817:73123_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1817:73123_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:1817:73123_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2960:77550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13818:79401_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3379:82052_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3379:82052_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3379:82052_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:3379:82052_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:8979:85191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:5922:85883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:5922:85883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:5922:85883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:5922:85883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6957:86678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:6663:88810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13321:94590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:7479:99150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:7479:99150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:7479:99150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:7479:99150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:13091:100132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2103:2092:101322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4927:4002_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4927:4002_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4927:4002_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4927:4002_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5571:5553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3267:7424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4542:9219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4542:9219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4542:9219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4542:9219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9453:10596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15304:15255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15276:17415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5283:17535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5283:17535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5283:17535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5283:17535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9431:17969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4240:18057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6686:19267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12579:22770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:21227:23340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:21227:23340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:21227:23340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:21227:23340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7089:26222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7089:26222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7089:26222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7089:26222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:18827:26067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:11863:28503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3321:31138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9139:32552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17405:36750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3307:40473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3307:40473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3307:40473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3307:40473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20070:41344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20070:41344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20070:41344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20070:41344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6156:43137_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6156:43137_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6156:43137_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6156:43137_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12122:43744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12122:43744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12122:43744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12122:43744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20288:44643_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20288:44643_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20288:44643_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20288:44643_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:19304:45038_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:19304:45038_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:19304:45038_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:19304:45038_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:3191:46968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15019:46760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6783:50428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9334:53008_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15825:54752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15709:60068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:6543:61555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9043:61696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9043:61696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9043:61696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:9043:61696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:7864:61949_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16543:63502_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16543:63502_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16543:63502_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16543:63502_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4522:64255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4941:66487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5659:66445_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5659:66445_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5659:66445_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5659:66445_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5010:69934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4806:71789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5570:73849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5570:73849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5570:73849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5570:73849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15091:74081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2290:75273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2042:75985_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2042:75985_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2042:75985_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:2042:75985_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14708:76501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:20447:80318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5415:81127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17601:84984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17601:84984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17601:84984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17601:84984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:15959:86217_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:8812:87647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5399:87837_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:14706:88602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:1736:90534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:12666:94780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5421:95929_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5421:95929_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5421:95929_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:5421:95929_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:13494:98153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7561:99168_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7561:99168_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7561:99168_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:7561:99168_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:17730:99926_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:4173:100819_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2105:16769:100984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8265:5714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6436:8305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17167:8253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17167:8253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17167:8253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17167:8253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5704:11408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17688:12922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17688:12922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17688:12922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17688:12922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11284:13319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6239:17057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6239:17057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6239:17057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:6239:17057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8939:19759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13223:21803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18602:23872_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1786:31371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7675:33159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10747:34940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10747:34940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10747:34940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10747:34940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11028:37134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14187:38634_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:9544:39431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15464:41800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8818:43641_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8818:43641_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8818:43641_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8818:43641_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18258:47778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15425:49571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13691:51361_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:10389:52305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11530:52185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11530:52185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11530:52185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11530:52185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14914:54932_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7263:55094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7267:56616_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:17004:59828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:14348:62597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20954:63856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20954:63856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20954:63856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20954:63856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3915:64277_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12260:65134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15789:68961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:3546:69307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12327:73446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18629:73698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5062:73825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5062:73825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5062:73825_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:5062:73825_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6901:76201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6901:76201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6901:76201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:6901:76201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:18341:76130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:19875:78309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:11561:81062_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1679:83909_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:15213:84632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20035:87514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:7361:92711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:12242:94927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13952:95758_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13952:95758_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13952:95758_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:13952:95758_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:1595:96522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8394:98787_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8394:98787_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8394:98787_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:8394:98787_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:2845:99808_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1309:20322:100528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4165:5637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:17406:6337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16702:8029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16702:8029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16702:8029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16702:8029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11344:13275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9084:17273_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 8000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18094:19216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18094:19216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18094:19216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18094:19216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9462:19347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20013:20732_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20013:20732_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20013:20732_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20013:20732_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6001:21167_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5303:30454_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20830:30295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15107:31327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15107:31327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15107:31327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15107:31327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16407:31815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5415:32271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:6376:34579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12578:36177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:18300:36424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14584:37684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:14304:41437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11948:41855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:10483:42261_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:5694:44027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:7494:46786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12780:50803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12161:54142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12161:54142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12161:54142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12161:54142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:8710:57647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:8710:57647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:8710:57647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:8710:57647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:2942:58379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:13031:59226_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9331:60051_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16076:62526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4272:63627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16983:66601_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16983:66601_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16983:66601_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16983:66601_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:3869:71651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16017:71618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:15131:74686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:16012:78084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:12580:79861_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:11623:96748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:1470:96834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:4141:97476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:20267:99448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1310:9198:99509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10902:4580_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10902:4580_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10902:4580_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10902:4580_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5488:5250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15630:9353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16235:9732_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:8794:13695_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6124:16148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6754:17970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13448:21047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13448:21047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13448:21047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13448:21047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17403:23028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6083:25944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6083:25944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6083:25944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6083:25944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16158:31988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4789:37877_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2134:38375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2134:38375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2134:38375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2134:38375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2021:39258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15059:39656_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6278:41131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3787:41417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3787:41417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3787:41417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3787:41417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16874:41363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16874:41363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16874:41363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16874:41363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5271:42415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6188:43346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18193:43301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6601:50082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7590:49600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:17068:49701_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18374:51133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18374:51133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18374:51133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18374:51133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11134:52434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15726:54429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3250:54939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6959:56129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2464:56600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5596:57211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7793:58701_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7793:58701_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7793:58701_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7793:58701_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18487:61109_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11378:64096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13025:64863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6664:66792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18682:67400_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:1364:67635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:1364:67635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:1364:67635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:1364:67635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:5819:68113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:13136:72949_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:3537:73685_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18725:73956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18725:73956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18725:73956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:18725:73956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4259:74474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4259:74474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4259:74474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:4259:74474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2391:75375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2391:75375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2391:75375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:2391:75375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:7946:76399_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20016:77336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:19862:79185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:10979:81595_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:15791:83303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:6708:86377_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14188:90845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14794:92831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:20488:96692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:14223:97039_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:16117:100639_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2108:11578:101408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14613:3647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6750:4292_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6750:4292_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6750:4292_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6750:4292_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6182:7481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19894:9661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19894:9661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19894:9661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19894:9661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:6270:11530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20191:12536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20293:16159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5479:18023_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20244:18547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14731:20986_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14731:20986_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14731:20986_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14731:20986_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5049:24211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4924:24614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15199:27772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15199:27772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15199:27772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15199:27772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8509:28422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8509:28422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8509:28422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8509:28422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20583:29322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20583:29322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20583:29322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20583:29322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8466:29715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8466:29715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8466:29715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8466:29715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20125:33191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13156:38016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2255:38907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:10551:40966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:10551:40966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:10551:40966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:10551:40966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12195:42948_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4148:44283_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4148:44283_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4148:44283_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4148:44283_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9487:44988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5897:45734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14415:45768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14415:45768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14415:45768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14415:45768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12198:46446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17306:46599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18686:48083_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18686:48083_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18686:48083_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18686:48083_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:3338:49785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17664:53510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19970:56338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:7565:57275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:7565:57275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:7565:57275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:7565:57275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5945:58508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:9276:59526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18327:60943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18327:60943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18327:60943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:18327:60943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17420:61350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17420:61350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17420:61350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17420:61350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:5986:61852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:4324:62201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19837:63712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17637:67481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2257:70905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2257:70905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2257:70905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2257:70905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12866:73223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12866:73223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12866:73223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:12866:73223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:1199:73977_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20515:75816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20515:75816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20515:75816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20515:75816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:20090:75872_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16492:76603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8693:78653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8693:78653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8693:78653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:8693:78653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14288:79637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14288:79637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14288:79637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14288:79637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16283:84878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:13204:85953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:15572:87745_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2954:93795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2954:93795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2954:93795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:2954:93795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:17038:94084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:19477:94624_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:16760:97245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14111:97304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2106:14037:98713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:9463:2631_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:9463:2631_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:9463:2631_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:9463:2631_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3628:4336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11807:7612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18088:8018_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11321:10147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17803:11234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10147:11660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10147:11660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10147:11660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10147:11660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5633:12115_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17498:12221_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17498:12221_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17498:12221_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17498:12221_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13465:13718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13465:13718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13465:13718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13465:13718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19380:13532_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20271:14581_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20271:14581_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20271:14581_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20271:14581_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13353:15381_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7675:16958_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12571:17480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:1515:18197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14345:19248_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14345:19248_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14345:19248_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14345:19248_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17674:23101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:16030:27280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:16030:27280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:16030:27280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:16030:27280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14055:28618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14055:28618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14055:28618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14055:28618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20236:35322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19393:38020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19393:38020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19393:38020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19393:38020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4407:38866_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20514:39977_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20514:39977_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20514:39977_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20514:39977_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14537:42196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14537:42196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14537:42196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14537:42196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14254:46980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:14728:49188_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11871:48625_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4025:48906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7902:51500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5024:53612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17146:55286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17146:55286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17146:55286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17146:55286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12842:58357_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12842:58357_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12842:58357_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12842:58357_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:5689:60541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7226:62195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7226:62195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7226:62195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7226:62195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:13827:62134_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20442:65639_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20442:65639_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20442:65639_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:20442:65639_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11937:66840_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18259:68500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18259:68500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18259:68500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18259:68500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4928:69095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4928:69095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4928:69095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4928:69095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:8480:72884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7409:74384_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7409:74384_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7409:74384_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:7409:74384_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:15680:74672_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:4337:75317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:18360:76654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:17562:76809_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2256:78025_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12643:80974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12643:80974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12643:80974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:12643:80974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:10317:82487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:19928:85265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:3358:89590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2973:90658_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:11932:92093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2104:2689:93517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7461:5594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7461:5594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7461:5594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7461:5594_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 9000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1856:10260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2658:11786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14862:14254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19448:19786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12176:20770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4640:23971_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7496:24363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20455:25513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20455:25513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20455:25513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20455:25513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:4534:30681_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12051:33068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12856:33697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3566:38154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20138:39852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20979:42572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:2566:45199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:12358:46989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7206:47536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15555:51680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15555:51680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15555:51680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15555:51680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6082:52091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19102:52840_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:3458:57680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17126:60800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19149:64514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19149:64514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19149:64514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:19149:64514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:18804:70744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6274:74186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:14208:74178_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:15498:76719_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:9468:78509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:9468:78509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:9468:78509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:9468:78509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:6260:84875_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:10016:87080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:13126:87368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:13126:87368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:13126:87368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:13126:87368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:7468:88506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:11344:93929_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:17009:93944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:20935:97898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:1441:98099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:8034:98007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:8034:98007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:8034:98007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:8034:98007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1311:16172:98195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6631:5315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18994:6022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14673:12450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14673:12450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14673:12450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14673:12450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:20361:16265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:15547:17303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:11244:18108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:17840:20250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18818:20508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19798:23577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19798:23577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19798:23577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19798:23577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8312:25020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:3557:26450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16328:29996_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:18471:30425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13039:32375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:4923:32750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:4923:32750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:4923:32750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:4923:32750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2356:33604_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11486:35092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11486:35092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11486:35092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:11486:35092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5004:35342_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:14055:38597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6567:39063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13500:44478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16889:44739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16315:45901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12506:47027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:1406:47734_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10710:48022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13238:51100_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19748:51229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10222:56914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10222:56914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10222:56914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10222:56914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6897:57418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:2258:58492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10975:62479_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16071:63144_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16071:63144_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16071:63144_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16071:63144_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:10956:64934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8702:70161_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:13846:70630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9096:71160_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:16977:72661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:7931:75774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5315:76235_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:8895:79860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:19237:79955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:6293:94227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:12296:94707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:9560:96914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1313:5420:101376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14232:13243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13907:14811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5319:15105_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:15123:16735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9200:19072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16453:20303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16453:20303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16453:20303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16453:20303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13245:24781_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6207:25590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10292:25513_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13578:25778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11558:28854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11558:28854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11558:28854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11558:28854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13403:29452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4720:31277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:19210:33564_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:19210:33564_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:19210:33564_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:19210:33564_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7726:37906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5470:39200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5470:39200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5470:39200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5470:39200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10235:41344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10235:41344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10235:41344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10235:41344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10906:42532_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14860:43304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13057:45148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13057:45148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13057:45148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13057:45148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5473:46191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5473:46191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5473:46191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5473:46191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11090:49839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16679:50903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12679:53560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12679:53560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12679:53560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12679:53560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6175:55121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6175:55121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6175:55121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6175:55121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:18738:55032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:9489:59919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:5428:61492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:7103:66879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10366:67371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:1510:67906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3316:68901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3316:68901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3316:68901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3316:68901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14566:69497_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14566:69497_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14566:69497_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:14566:69497_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10683:70325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:6881:72374_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20340:72466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17712:73189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:12517:76242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20216:77043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20216:77043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20216:77043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:20216:77043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10139:77826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10139:77826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10139:77826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:10139:77826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13951:78225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4909:81391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4909:81391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4909:81391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4909:81391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:16918:83031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3102:83301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3102:83301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3102:83301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3102:83301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:3078:85218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:19879:85129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:19879:85129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:19879:85129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:19879:85129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:4067:87136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11949:92362_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13589:94321_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13589:94321_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13589:94321_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:13589:94321_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17194:96759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17194:96759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17194:96759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:17194:96759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1301:11366:98495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14608:3334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12005:7298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14979:10673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6002:12399_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6002:12399_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6002:12399_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6002:12399_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6306:13397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6306:13397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6306:13397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6306:13397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2511:14689_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4300:15854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15510:17632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10004:18144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7414:20337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7414:20337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7414:20337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7414:20337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19040:21001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9391:21934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9471:23746_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9471:23746_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9471:23746_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9471:23746_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6851:26822_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19899:26839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19899:26839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19899:26839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19899:26839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9259:27594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9259:27594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9259:27594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:9259:27594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17372:30776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4147:32813_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10670:35077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10670:35077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10670:35077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10670:35077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2997:35375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:1501:36752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20000:37004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20000:37004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20000:37004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20000:37004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8564:38224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8564:38224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8564:38224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8564:38224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:2764:40662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6685:40124_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6685:40124_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6685:40124_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6685:40124_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:5891:47079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:5891:47079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:5891:47079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:5891:47079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17216:47379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17216:47379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17216:47379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:17216:47379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7727:48432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8952:48430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8952:48430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8952:48430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8952:48430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:12272:49079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13635:50406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13602:51051_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:19982:51195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16343:52812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4906:54224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4906:54224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4906:54224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:4906:54224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16407:61313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16407:61313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16407:61313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16407:61313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16724:65637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7391:66992_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12106:68623_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12106:68623_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12106:68623_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:12106:68623_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6889:68798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7830:69827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:15972:72814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:3901:75136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10292:75422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7992:78527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:14878:81058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:20133:81172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6308:83573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6308:83573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6308:83573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:6308:83573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7481:87256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:7385:88035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:11840:92596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:11840:92596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:11840:92596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:11840:92596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:10853:92806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:13829:96890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16220:98586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16220:98586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16220:98586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:16220:98586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1302:8784:100799_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 10000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6669:5494_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13957:5607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13290:7141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12605:8153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:2825:10290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20829:12602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5492:18055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:7307:19402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18102:21009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17232:23186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_1:N:0:CATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_1:N:0:CATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_1:N:0:CATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_1:N:0:CATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:6724:24073_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17031:32344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17031:32344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17031:32344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:17031:32344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18611:33253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3027:34742_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13063:41367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13063:41367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13063:41367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:13063:41367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:18955:47720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4548:50671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:10739:51563_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20928:51628_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20928:51628_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20928:51628_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20928:51628_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14992:53839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20919:53798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:9937:56247_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11495:57182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12575:58360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12575:58360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12575:58360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12575:58360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13815:59693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13815:59693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13815:59693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13815:59693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4125:62372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13467:62792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13467:62792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13467:62792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:13467:62792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:1533:63256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:20623:66670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16713:69116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:5694:69885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3730:72651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3730:72651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3730:72651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3730:72651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:4915:79931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16482:82463_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16482:82463_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16482:82463_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16482:82463_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:14528:85254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:16886:87575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:3954:88197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:11167:92337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1316:12140:96506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5901:4848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5901:4848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5901:4848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5901:4848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9478:4948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20755:5955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:7503:9423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_1:N:0:GATGAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_2:N:0:GATGAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_1:N:0:GATGAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_2:N:0:GATGAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_1:N:0:GATGAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_2:N:0:GATGAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_1:N:0:GATGAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2268:11373_2:N:0:GATGAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:2009:17577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14603:19093_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18912:19669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:17894:21339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19159:21618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9747:24749_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9214:30136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15052:30707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:1415:33340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:1415:33340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:1415:33340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:1415:33340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13569:36021_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13569:36021_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13569:36021_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13569:36021_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14146:37779_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13464:40717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13464:40717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13464:40717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13464:40717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6375:41955_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:6966:43089_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5746:50427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5746:50427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5746:50427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5746:50427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4845:55194_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15335:55020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5439:56596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5945:57519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5945:57519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5945:57519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5945:57519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19127:60974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19127:60974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19127:60974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19127:60974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13847:66587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15898:66202_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15898:66202_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15898:66202_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:15898:66202_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11151:67318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:16665:67259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:16665:67259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:16665:67259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:16665:67259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11992:68629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:4604:69842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:3664:75637_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9875:79834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9875:79834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9875:79834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:9875:79834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:13996:80610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:11206:85562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:18535:87488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4374:90386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4374:90386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4374:90386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:4374:90386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:5060:91987_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19000:92888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19000:92888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19000:92888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:19000:92888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:8869:95123_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:14642:95919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:12405:97605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:12405:97605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:12405:97605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:12405:97605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1314:20638:100358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8984:2709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5989:11484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19151:12238_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12385:14582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15196:16273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15196:16273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15196:16273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15196:16273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13074:17432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13026:20336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10405:21891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2923:22034_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6680:25705_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13682:30003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19858:33587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19858:33587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19858:33587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19858:33587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4966:33968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4799:43510_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:10693:44888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9364:44910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7776:46354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11240:47990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2980:50607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2730:50807_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:18171:56990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:18171:56990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:18171:56990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:18171:56990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9648:57549_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17315:59418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17137:60451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:2008:60907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:16349:62119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:4003:63519_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:3988:67913_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:6405:69198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11506:70423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:12828:71357_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:20368:73735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:20368:73735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:20368:73735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:20368:73735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13991:77915_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11520:79021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15688:79448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15688:79448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15688:79448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15688:79448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17899:80119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11938:80757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19959:80768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19959:80768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19959:80768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19959:80768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:13222:83934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:7610:85884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:19060:86884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:11184:89290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9569:90239_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:9562:91329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8609:91752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8609:91752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8609:91752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8609:91752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15187:94491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15573:94799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:1764:95676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:8662:96958_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:5325:98797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:17073:98915_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15561:99808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15561:99808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15561:99808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1312:15561:99808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9515:2336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9515:2336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9515:2336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9515:2336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9307:4003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9307:4003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9307:4003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9307:4003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9062:4785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9062:4785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9062:4785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9062:4785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6003:11827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6003:11827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6003:11827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6003:11827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8433:12596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17537:16203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8738:17359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8738:17359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8738:17359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8738:17359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10664:18770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6378:20429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14091:20371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14091:20371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14091:20371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14091:20371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18488:22397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11613:25184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11613:25184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11613:25184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11613:25184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19603:29567_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15300:31545_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2365:33048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8848:33404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9329:38157_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9329:38157_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9329:38157_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9329:38157_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9038:38892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8510:40519_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:20507:40860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:3167:43858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7198:44114_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7868:44669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:4379:51326_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10481:57220_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10481:57220_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10481:57220_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:10481:57220_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6295:57555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6295:57555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6295:57555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:6295:57555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13577:57503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5168:60755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17636:63099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:5134:66018_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2399:67040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2399:67040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2399:67040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2399:67040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18960:73920_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18960:73920_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18960:73920_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18960:73920_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:11672:79401_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:2045:79538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8082:83810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18522:84412_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8032:84728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8032:84728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8032:84728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8032:84728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13285:85203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:8669:87322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18388:88286_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:7735:90159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:19075:90553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5681:91869_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5681:91869_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5681:91869_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:5681:91869_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:18659:92268_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:17514:92581_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:14535:94518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:15813:95894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:13266:97529_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 11000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1303:9664:101021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16238:5475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16238:5475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16238:5475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16238:5475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:18885:7132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3325:11999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:20787:12512_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:12611:14076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8630:14564_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:17479:15190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13110:15686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10394:15896_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10394:15896_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10394:15896_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10394:15896_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5431:23148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5431:23148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5431:23148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5431:23148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16878:25189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16718:25943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16718:25943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16718:25943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16718:25943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3710:29929_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3710:29929_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3710:29929_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3710:29929_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13850:31842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10769:34586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3458:35670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2142:35822_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2142:35822_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2142:35822_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2142:35822_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10650:35888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10650:35888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10650:35888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10650:35888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3279:36249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3279:36249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3279:36249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3279:36249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:11559:38264_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:11559:38264_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:11559:38264_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:11559:38264_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14381:39247_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:1380:39846_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:5164:42127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14356:42758_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6988:43506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6988:43506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6988:43506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6988:43506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16770:44608_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16770:44608_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16770:44608_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:16770:44608_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:13209:48112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15175:54359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15175:54359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15175:54359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15175:54359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3559:55764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3559:55764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3559:55764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3559:55764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2400:63935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2400:63935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2400:63935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2400:63935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16118:64529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16118:64529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16118:64529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:16118:64529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8074:65635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8074:65635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8074:65635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8074:65635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9627:67967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:9001:68518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:10373:70150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19392:71782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15126:74944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15126:74944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15126:74944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15126:74944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:3173:76840_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14702:78503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14702:78503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14702:78503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14702:78503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:14361:80568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4626:85253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:4312:87323_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:2739:89614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:15976:90335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:19978:90736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:8839:91904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7745:97730_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7745:97730_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7745:97730_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7745:97730_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:21294:97511_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:21294:97511_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:21294:97511_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:21294:97511_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:6790:99793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1305:7252:100936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20495:3271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18787:4501_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17535:5268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16552:14324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16552:14324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16552:14324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16552:14324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16264:14538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10850:16765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8777:18939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8777:18939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8777:18939_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8777:18939_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11542:20847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8690:22293_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9349:26003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4178:28187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4178:28187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4178:28187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4178:28187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17314:29626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17314:29626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17314:29626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17314:29626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3707:30686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15480:31219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3243:32307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:10022:33420_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11307:33816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16528:38275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6822:38865_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7366:39559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:13344:39765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6571:42441_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6571:42441_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6571:42441_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:6571:42441_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4340:43097_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4288:44434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4288:44434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4288:44434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:4288:44434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14526:47565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14526:47565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14526:47565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14526:47565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20870:47630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20870:47630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20870:47630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20870:47630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:12715:50012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:12715:50012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:12715:50012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:12715:50012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:12967:50879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:12967:50879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:12967:50879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:12967:50879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16345:51648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:15434:52177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7056:52490_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14554:57723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2216:58491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2216:58491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2216:58491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2216:58491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2708:65468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:9796:66339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3140:69074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7697:69633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:5898:69805_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:17390:70335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:16679:72290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3084:74206_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3545:79258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3545:79258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3545:79258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:3545:79258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:11563:80166_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:8061:80834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20541:82296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:20965:85177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19931:86906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14796:87889_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14796:87889_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14796:87889_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:14796:87889_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:2678:96103_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:18374:96213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7930:97197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7930:97197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7930:97197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:7930:97197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1209:19210:98469_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14274:98547_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14274:98547_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14274:98547_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1209:14274:98547_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8958:2871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18370:4854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2903:6068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18457:6189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18457:6189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18457:6189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18457:6189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20299:6192_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16079:6421_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13439:9001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19202:9223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19202:9223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19202:9223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19202:9223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4600:15841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:14126:17275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20232:18606_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20019:21738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20019:21738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20019:21738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20019:21738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9947:22494_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11717:27665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11717:27665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11717:27665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11717:27665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6769:33728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:3735:34119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:11807:34537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17934:34298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17934:34298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17934:34298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17934:34298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6331:37233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7640:41710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:17309:41680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9631:43775_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20503:44058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:5201:46020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9016:47025_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9016:47025_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9016:47025_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9016:47025_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10361:48147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16359:48063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9615:49302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9615:49302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9615:49302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9615:49302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10374:51390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:19371:52680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13724:59936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6724:59941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6724:59941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6724:59941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:6724:59941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13911:62455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:16830:64428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:9571:65863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:18428:65995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:4239:69978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:10194:70026_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:20152:77188_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:13849:82175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:21252:84140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:21252:84140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:21252:84140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:21252:84140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11942:84715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11942:84715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11942:84715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:11942:84715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:12498:86079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:7232:86811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:15704:89555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:1694:95657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:2928:99425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1210:8762:101201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4223:3531_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:6823:4279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15757:6310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13861:10448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13861:10448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13861:10448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13861:10448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11252:10914_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18646:13006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18646:13006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18646:13006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18646:13006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16018:13668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:18602:18631_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:1272:19725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:1272:19725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:1272:19725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:1272:19725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12883:21729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:21865_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10748:23426_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9091:27151_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9091:27151_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9091:27151_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9091:27151_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13201:32090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15197:34527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9560:35892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9560:35892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9560:35892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9560:35892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2167:39304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15170:39575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15769:40530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:5403:46383_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13148:47081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12758:49502_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12758:49502_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12758:49502_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12758:49502_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:19018:52879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8440:57054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:13382:59725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:15673:59614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:11046:63771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2004:64182_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2004:64182_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2004:64182_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2004:64182_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8150:65737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8150:65737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8150:65737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:8150:65737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12652:67701_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16648:69899_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16648:69899_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16648:69899_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:16648:69899_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:12736:70363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:9453:73023_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3925:77948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4140:78883_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4140:78883_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4140:78883_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:4140:78883_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:3905:81904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14271:84765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14271:84765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14271:84765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14271:84765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10608:85562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:14790:87508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:17058:91906_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 12000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:7406:99375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10917:99332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10917:99332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10917:99332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10917:99332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:2062:99594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1308:10771:101067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17631:5303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17631:5303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17631:5303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17631:5303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:19401:5581_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:19401:5581_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:19401:5581_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:19401:5581_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9688:5838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9688:5838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9688:5838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9688:5838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:5668:12651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6928:12778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:18343:14871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:18343:14871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:18343:14871_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:18343:14871_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6008:16169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11049:16040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10416:16750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16762:18009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16718:18375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16718:18375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16718:18375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16718:18375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:13862:19378_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15496:21893_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9981:22554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:6739:29225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:20034:31537_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:20034:31537_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:20034:31537_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:20034:31537_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10609:37981_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:4887:42482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11143:44969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7972:50004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:1396:54476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17879:55086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8807:56011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:16637:56082_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7053:60321_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11853:60418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:11863:63029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2679:68162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3382:69349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:12559:69550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:3478:72863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:9830:72954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:10275:75918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8682:76593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17992:78397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17806:83525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17806:83525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17806:83525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:17806:83525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15799:91292_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:14922:94688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:7219:95438_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15629:96897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15629:96897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15629:96897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:15629:96897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:8160:98576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1306:2716:100012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10514:3007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10514:3007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10514:3007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10514:3007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13209:5792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7959:9223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8169:9754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8169:9754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8169:9754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8169:9754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19259:10110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19259:10110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19259:10110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19259:10110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2762:11882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2762:11882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2762:11882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2762:11882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18806:12576_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3852:13473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20926:15053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18626:16077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18626:16077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18626:16077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18626:16077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8442:21700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8442:21700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8442:21700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8442:21700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10214:22309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8704:24156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8704:24156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8704:24156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8704:24156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17129:24506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17129:24506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17129:24506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17129:24506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17607:27712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2027:33234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3386:40855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8586:48055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8586:48055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8586:48055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8586:48055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7333:50299_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:5003:60058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18073:62720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:10460:62830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:4249:63747_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15155:63933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17912:65037_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17912:65037_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17912:65037_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17912:65037_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:1252:67490_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:1252:67490_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:1252:67490_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:1252:67490_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13002:70127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2551:72497_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6764:75024_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:21032:75133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15862:76854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15862:76854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15862:76854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:15862:76854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8809:77656_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8809:77656_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8809:77656_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8809:77656_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13214:77627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:2176:82537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3962:83812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17842:88869_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3904:90451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3193:90928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3193:90928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3193:90928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:3193:90928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7344:91058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:18303:93613_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6249:94151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6249:94151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6249:94151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6249:94151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13396:94233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13396:94233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13396:94233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:13396:94233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:8369:94387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:12614:94903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:19432:96802_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:20064:97740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4238:98282_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4238:98282_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4238:98282_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:4238:98282_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:7137:98883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:11593:99473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:17011:100023_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1304:6866:100466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20075:3689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20075:3689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20075:3689_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20075:3689_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19807:4242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15679:5091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14644:5730_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:9425:6605_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:9425:6605_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:9425:6605_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:9425:6605_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13154:6619_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14909:6941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18150:7064_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18150:7064_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18150:7064_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18150:7064_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13962:14560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13962:14560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13962:14560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13962:14560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15371:15015_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12136:15319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12898:17677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6457:18021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6641:19583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:14898:25065_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10820:27894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2666:28546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2101:29819_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2101:29819_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2101:29819_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2101:29819_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:18706:30342_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:30890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:30890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:30890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:30890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20714:33786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20714:33786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20714:33786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20714:33786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1919:38278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:17821:41922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:17821:41922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:17821:41922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:17821:41922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:10864:43478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2939:44822_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11559:47660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11559:47660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11559:47660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11559:47660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19468:50602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19468:50602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19468:50602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19468:50602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15374:51327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20762:52179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20762:52179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20762:52179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20762:52179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5380:54955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7358:57818_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:4065:58322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11552:62536_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6221:64806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13348:64925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13348:64925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13348:64925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13348:64925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16917:65727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13666:69057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:20890:71487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2624:73058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19104:73369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19104:73369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19104:73369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:19104:73369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:2540:81800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:5914:81892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13815:82605_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:6543:83509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:1995:84167_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:3384:85043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:8211:85884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:8211:85884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:8211:85884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:8211:85884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13455:86207_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13455:86207_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13455:86207_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:13455:86207_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:11979:87488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:12746:87945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15461:90048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15461:90048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15461:90048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:15461:90048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:16294:95364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1211:7188:96827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:14755:7954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19265:9027_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10039:17127_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4672:18714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:9874:19657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:8982:19752_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10899:20851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16978:24203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5155:27062_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19788:27527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11167:28446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11167:28446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11167:28446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11167:28446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:18493:28763_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7708:31514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:12921:33076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:12921:33076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:12921:33076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:12921:33076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:7829:33957_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:20944:34297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2584:39762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19901:41484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:1638:46773_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14294:52279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14294:52279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14294:52279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:14294:52279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15872:53436_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15358:54145_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15589:56464_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15589:56464_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15589:56464_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:15589:56464_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5599:61907_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5674:66691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3589:68612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:17851:70168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10568:72486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:11240:77545_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:3056:80938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:19187:86898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16015:87688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4814:88032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:5885:88253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:2379:88904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:4808:90805_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 13000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:10023:96172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1213:16466:96836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10005:3434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11756:4085_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11756:4085_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11756:4085_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11756:4085_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:18125:6367_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10206:7262_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10206:7262_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10206:7262_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10206:7262_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2505:8203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9293:9774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9293:9774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9293:9774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9293:9774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9519:10097_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:1700:11308_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:1700:11308_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:1700:11308_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:1700:11308_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4456:14167_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19110:20376_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19110:20376_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19110:20376_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19110:20376_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12120:26699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3411:26786_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3872:29934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3872:29934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3872:29934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3872:29934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:13592:29793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11167:32290_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17458:34988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:2111:35499_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3756:36691_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7779:37956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7779:37956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7779:37956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7779:37956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16913:39076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16913:39076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16913:39076_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16913:39076_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10760:39546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10760:39546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10760:39546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10760:39546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4048:42482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10957:47814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19089:48269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3982:48697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3982:48697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3982:48697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3982:48697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:21112:49119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:21112:49119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:21112:49119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:21112:49119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11962:53432_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:14148:53116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:14148:53116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:14148:53116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:14148:53116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3791:55288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3791:55288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3791:55288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:3791:55288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9283:57218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9283:57218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9283:57218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9283:57218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12813:57271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:12535:60112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4949:61057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:10603:62054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16348:70282_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16348:70282_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16348:70282_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:16348:70282_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:19726:70843_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6519:81910_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6418:84836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:7388:86883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:4528:87965_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:21238:87140_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:21238:87140_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:21238:87140_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:21238:87140_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:20592:88292_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17123:96398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17123:96398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17123:96398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:17123:96398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11653:97508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11653:97508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11653:97508_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:11653:97508_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:6839:100169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1201:9875:100811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2713:3948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2713:3948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2713:3948_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2713:3948_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3922:12859_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3207:23098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19160:24535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13395:25441_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5527:26460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13598:26994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4186:30939_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4186:30939_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4186:30939_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4186:30939_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3815:31663_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5161:32398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:6581:36868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:6581:36868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:6581:36868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:6581:36868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9503:39789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9503:39789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9503:39789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9503:39789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:15385:42143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:15385:42143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:15385:42143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:15385:42143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5192:42358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5192:42358_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5192:42358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:5192:42358_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10980:42673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10980:42673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10980:42673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10980:42673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9009:44622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12141:46353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4201:46905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4201:46905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4201:46905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:4201:46905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9289:48074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8859:52905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:11942:53234_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:10186:56114_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1426:59872_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1426:59872_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1426:59872_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1426:59872_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3746:60724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3746:60724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3746:60724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:3746:60724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9333:61244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9333:61244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9333:61244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9333:61244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14604:62084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2378:64839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2378:64839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2378:64839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:2378:64839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16655:67669_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13470:69850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:19108:73394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:13630:74577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:12391:79389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:14291:86257_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:8616:94406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:16834:94266_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9556:95265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9556:95265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9556:95265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:9556:95265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1346:95757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1912:98403_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1912:98403_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1912:98403_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1202:1912:98403_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17921:4753_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17921:4753_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17921:4753_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17921:4753_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16482:5517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7558:7174_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7558:7174_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7558:7174_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7558:7174_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20340:8033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20340:8033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20340:8033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20340:8033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20197:9022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20197:9022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20197:9022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20197:9022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6026:9541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6026:9541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6026:9541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6026:9541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19421:12298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19421:12298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19421:12298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19421:12298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8179:15192_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13970:20295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13310:22906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:14998:26208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17184:27850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12782:32216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:21113:33291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3552:34152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13563:35551_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:20057:36359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9660:38481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6121:41006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6937:42721_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10692:42891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10692:42891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10692:42891_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10692:42891_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17518:43800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17518:43800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17518:43800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17518:43800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7785:46892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17637:50768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:3585:52310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7622:52423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11629:53038_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12632:53269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12632:53269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12632:53269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:12632:53269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10100:59608_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10100:59608_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10100:59608_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:10100:59608_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8487:60468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:13698:60532_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:7711:61450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9223:62173_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17651:62946_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17651:62946_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17651:62946_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17651:62946_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:17969:66945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:19394:68862_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:16552:80365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9087:83157_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9087:83157_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9087:83157_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:9087:83157_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7197:84828_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7197:84828_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7197:84828_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:7197:84828_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:6170:87000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11009:88658_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11009:88658_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11009:88658_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11009:88658_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8524:88830_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:11303:90523_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:4382:93810_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8568:99386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8568:99386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8568:99386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1216:8568:99386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:3185:3007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:3185:3007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:3185:3007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:3185:3007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:21279:7425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:21279:7425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:21279:7425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:21279:7425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10497:8890_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7635:18677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14705:19842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14705:19842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14705:19842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14705:19842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:19971:20081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15346:23159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18033:24481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18033:24481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18033:24481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18033:24481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4605:37411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4605:37411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4605:37411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4605:37411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7528:39453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7528:39453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7528:39453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7528:39453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15792:39713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6829:39967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7906:41359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7906:41359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7906:41359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7906:41359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7580:42170_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:20281:43121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18541:45142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18541:45142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18541:45142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:18541:45142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:6907:45314_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14891:48424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10820:53467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10820:53467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10820:53467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:10820:53467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:13502:54185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4602:63988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:14827:71121_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15913:71728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:5751:73744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:9093:76854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:17324:77366_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8620:77514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8620:77514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8620:77514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8620:77514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8235:78209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8235:78209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8235:78209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:8235:78209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7754:83092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4103:86164_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:15982:92683_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:4819:94850_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 14000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1214:7255:96952_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8004:2961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4620:3716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4620:3716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4620:3716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4620:3716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7964:4989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8986:7836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8986:7836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8986:7836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8986:7836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8502:7904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8177:9472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12292:12768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2103:15906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5144:19838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:9769:23213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20948:24998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17100:25554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:20669:26413_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16078:27972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16078:27972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16078:27972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16078:27972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14627:28662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4846:30370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:13097:35556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:13097:35556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:13097:35556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:13097:35556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12665:35989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12665:35989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12665:35989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12665:35989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17738:38068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10540:48324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10540:48324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10540:48324_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10540:48324_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2589:51947_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2589:51947_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2589:51947_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2589:51947_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:1619:52351_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6292:53869_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:8675:54058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7384:58037_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10233:61034_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18136:61963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:19645:62130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12118:62315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17620:63885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5943:66818_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6561:67561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5079:68474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:10200:69347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:6721:71225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17220:76376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:3476:76506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2842:78402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:5497:78653_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:14574:83958_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11044:85722_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11786:86182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11786:86182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11786:86182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:11786:86182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:16210:86151_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:7658:89325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:2690:89702_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:18193:94770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:4830:97492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:12484:97787_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1212:17632:100363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11398:2744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17551:5394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13671:7573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13671:7573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13671:7573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13671:7573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8698:10369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19113:10547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19113:10547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19113:10547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19113:10547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10737:12113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11233:12693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16973:16206_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9571:17882_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18293:21035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:21062:23667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16046:28073_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11783:30931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17705:32340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:9399:34393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17632:37898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17632:37898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17632:37898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17632:37898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8485:38108_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8485:38108_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8485:38108_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8485:38108_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11683:39776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3220:41153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3220:41153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3220:41153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3220:41153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13605:43984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13605:43984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13605:43984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13605:43984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5549:46966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10342:47205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4169:47998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16331:49257_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16331:49257_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16331:49257_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16331:49257_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15736:50721_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13418:52168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16487:52373_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10783:54647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6423:55329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3549:58244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6805:63562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6805:63562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6805:63562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6805:63562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12152:67848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:11276:71839_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:12128:72621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4908:74069_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17320:74823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:8202:75462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17647:75379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:2104:76954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:16414:78486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:19684:81941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:15255:81327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:5971:82594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:6751:83762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:14840:86149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13693:86307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13693:86307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13693:86307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:13693:86307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:10615:88697_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4136:89705_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4136:89705_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4136:89705_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:4136:89705_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:18318:96435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17691:97209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3748:98059_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3748:98059_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3748:98059_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:3748:98059_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:17397:98343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1203:1720:98984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18841:2463_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18271:100722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18271:100722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18271:100722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1203:18271:100722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16718:5100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16718:5100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16718:5100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16718:5100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:1649:12452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14915:12408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18872:14973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20530:17082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20530:17082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20530:17082_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20530:17082_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5451:17130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8600:18002_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8600:18002_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8600:18002_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8600:18002_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16970:19289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13784:25628_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13784:25628_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13784:25628_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13784:25628_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8311:25845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14447:27126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8168:28678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9087:29149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12550:30588_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12341:31241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12341:31241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12341:31241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:12341:31241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:5594:34096_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9396:37611_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9234:38054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:15105:38289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10344:43527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16127:47521_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:4164:48620_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7900:50355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7900:50355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7900:50355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7900:50355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8354:50728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:8015:50897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10426:53141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18759:54476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20096:55547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20096:55547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20096:55547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20096:55547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11093:58214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:20570:62471_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10329:66269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10329:66269_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10329:66269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10329:66269_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16723:68522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13748:68945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10294:69443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10294:69443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10294:69443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10294:69443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3400:71319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13847:71406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:18416:75946_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:21289:76934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:21289:76934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:21289:76934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:21289:76934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3807:77628_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3807:77628_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3807:77628_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3807:77628_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9201:78217_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9201:78217_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9201:78217_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9201:78217_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13520:83944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6169:84091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:9335:84364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14576:86131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:3082:86285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:11015:90420_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:6273:91047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7664:94329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:7621:96560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:16666:96913_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14384:97445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14384:97445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14384:97445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:14384:97445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:13173:97622_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1205:10910:98174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20190:2280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5326:8740_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10393:11912_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:18035:15417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5342:15885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18081:17134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18081:17134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18081:17134_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:18081:17134_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1298:27135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12491:30387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13027:33021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19574:33512_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19574:33512_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19574:33512_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19574:33512_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1982:36578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1982:36578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1982:36578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1982:36578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6127:37884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6127:37884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6127:37884_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6127:37884_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7829:41837_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16086:43917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16086:43917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16086:43917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16086:43917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5312:44394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5503:46794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14904:46911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11716:48816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13089:51310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13089:51310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13089:51310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13089:51310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13750:51276_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7131:52224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7131:52224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7131:52224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7131:52224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14850:53184_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19499:53291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19499:53291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19499:53291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19499:53291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14179:59247_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16172:64790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15966:65665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:20282:66107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12008:68320_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:19236:68953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:10098:69727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:14935:70924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:1762:71768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16464:72660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:6019:74534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15879:78443_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:7757:79453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:12449:81834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:11819:83335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:16303:89338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13252:93323_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:15909:98225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:13392:99401_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 15000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1109:5806:100028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15117:2425_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:20046:4760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:20046:4760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:20046:4760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:20046:4760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11826:6030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10917:8821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10917:8821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10917:8821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10917:8821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15540:11154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5177:11693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3793:11897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3793:11897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3793:11897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3793:11897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10211:12094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10211:12094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10211:12094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10211:12094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:9893:14171_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11284:15809_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13273:18237_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12101:21522_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15188:22050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:8278:23679_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3237:25099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16586:25782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15081:27211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19870:30319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:19586:33091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:13655:35727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18398:37020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:16174:38162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12335:41988_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12946:42493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7053:43085_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7142:45453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:11057:47961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:18880:49203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10082:52930_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_1:N:0:GAACAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_2:N:0:GAACAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_1:N:0:GAACAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_2:N:0:GAACAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_1:N:0:GAACAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_2:N:0:GAACAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_1:N:0:GAACAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17031:53289_2:N:0:GAACAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4497:54961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10255:56852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15071:58138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:14733:58528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12650:59183_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:3440:61332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3216:65829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3216:65829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3216:65829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:3216:65829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15827:66288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:7686:69607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10595:73052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:6989:74325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:6989:74325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:6989:74325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:6989:74325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15348:77267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15348:77267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15348:77267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15348:77267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:5052:79035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17647:79726_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:2587:79852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:10591:79920_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:12996:80579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:17161:91918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1705:93107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:4344:93285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:15240:95162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:20822:100532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:20822:100532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:20822:100532_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:20822:100532_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1110:1503:101435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20496:2610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21205:4221_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5070:4944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12693:10050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13878:12350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14429:12148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5278:15783_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18893:16676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1439:18585_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19910:22617_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19980:25202_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19980:25202_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19980:25202_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19980:25202_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1766:25696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20719:25828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20719:25828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20719:25828_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20719:25828_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:21129:26126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10651:27527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10651:27527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10651:27527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10651:27527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11201:28322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3907:29687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6976:30493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13432:31021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13432:31021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13432:31021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13432:31021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:11908:34431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:18078:34270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:5454:44682_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6595:44524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20392:46627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17673:49857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8789:51071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:6798:52174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4262:54550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1729:55816_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12531:58022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12531:58022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12531:58022_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:12531:58022_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:20034:58663_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:19763:59973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3596:66068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3596:66068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3596:66068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:3596:66068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14577:66131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:2623:68455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:9658:72562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:9658:72562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:9658:72562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:9658:72562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10376:75136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:8577:76028_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:17670:79885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10136:84112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10136:84112_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10136:84112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:10136:84112_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:14976:88561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1699:91876_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1699:91876_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1699:91876_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:1699:91876_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:13100:93020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1208:4854:93730_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13599:4821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15031:6870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7410:9598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9614:9640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20064:11944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20064:11944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20064:11944_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20064:11944_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16660:12989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9494:14212_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14036:14861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:4428:15313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12029:16001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12029:16001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12029:16001_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12029:16001_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10918:22055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7579:24477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15522:24694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:18370:27387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11470:29662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10436:29759_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13348:32342_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13348:32342_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13348:32342_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13348:32342_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5721:33614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1835:37101_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12794:41523_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15371:42885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19788:43016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19788:43016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19788:43016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19788:43016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13399:43348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14242:44106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14242:44106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14242:44106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14242:44106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10995:45776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2090:46790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2090:46790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2090:46790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2090:46790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12069:47575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9681:48671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5300:50863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13616:52998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20474:53044_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:11000:53633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10243:54196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16212:55263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1541:58392_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:20840:59138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7727:60629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16206:63501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16206:63501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16206:63501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16206:63501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14372:64189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14372:64189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14372:64189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:14372:64189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6029:66411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:16935:68195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:15697:69126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1492:69903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12249:71514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9295:72147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12211:72496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12211:72496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12211:72496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12211:72496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:19297:72560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:2587:73191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3286:73424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1763:74468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1763:74468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1763:74468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1763:74468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7838:75050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:21043:75821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:21043:75821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:21043:75821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:21043:75821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:9296:76753_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5257:83271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7882:83527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7882:83527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7882:83527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:7882:83527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:3531:83793_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12604:86540_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12792:89354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:13672:90094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:10181:91592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:5998:91852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:8021:91959_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_1:N:0:GCTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_1:N:0:GCTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_1:N:0:GCTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_1:N:0:GCTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:12889:91973_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6083:93111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6083:93111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6083:93111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:6083:93111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1206:1967:96499_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15858:3389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9396:4240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13712:5388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13712:5388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13712:5388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13712:5388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13833:6526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13833:6526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13833:6526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:13833:6526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4095:6931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4095:6931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4095:6931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4095:6931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4658:7318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4658:7318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4658:7318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4658:7318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17470:7518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19160:8555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6238:9686_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5785:17003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9274:17650_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15977:18529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14617:28171_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14462:29287_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16361:29456_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16361:29456_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16361:29456_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16361:29456_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18256:30179_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18256:30179_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18256:30179_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18256:30179_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19845:30140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17130:32136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4718:33180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6944:34323_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4116:36372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4116:36372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4116:36372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4116:36372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:3153:36802_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19255:36841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19255:36841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19255:36841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19255:36841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6119:37501_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15216:38824_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:19765:38834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:1440:41407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16962:45919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16962:45919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16962:45919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16962:45919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11645:48468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15140:48485_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15140:48485_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15140:48485_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15140:48485_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17447:51509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:5562:52208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:11851:52293_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15227:61547_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:10184:62162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6882:63390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6882:63390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6882:63390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:6882:63390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12473:70078_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17181:75928_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:7195:79991_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:12134:80955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16025:81483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16762:82534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:4879:87238_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9200:87707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:18660:92349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:14862:93338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:16272:94191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:9899:94447_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:15002:96495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:17959:96570_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 16000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1204:2204:99662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17655:3297_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3705:9587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17887:9520_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15256:10237_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15256:10237_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15256:10237_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15256:10237_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8090:19143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13418:26963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:4650:28477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:4650:28477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:4650:28477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:4650:28477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13811:29589_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13811:29589_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13811:29589_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13811:29589_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18571:29590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17543:32813_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6046:33812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6046:33812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6046:33812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6046:33812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:2029:44682_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:2029:44682_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:2029:44682_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:2029:44682_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18637:45739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7398:46776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6161:48205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20009:51463_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3083:51774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14529:53091_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14529:53091_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14529:53091_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14529:53091_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3617:54205_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:6764:55834_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:5594:57145_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:5594:57145_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:5594:57145_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:5594:57145_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:9523:58142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:15104:58388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17599:60851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17599:60851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17599:60851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17599:60851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7258:64457_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7258:64457_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7258:64457_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7258:64457_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12785:67359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17914:67947_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8814:68879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8814:68879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8814:68879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:8814:68879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:18867:69983_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19559:71245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14178:72921_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12331:73071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:14527:73003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3454:75289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:12386:76224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13924:76115_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:20964:82424_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17101:86240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17101:86240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17101:86240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:17101:86240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:13840:86722_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:19819:86760_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7913:88199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7913:88199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7913:88199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:7913:88199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:3772:89253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1111:16121:97296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12430:2621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2298:5829_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14623:8492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5853:8575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5853:8575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5853:8575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5853:8575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3513:9389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18380:9259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:10779:15315_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:15030:15389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19008:19194_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4134:20442_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4134:20442_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4134:20442_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4134:20442_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13486:20903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2190:21224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:19239:21446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7687:21780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16398:24345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5295:28406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13952:30646_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14762:29955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3432:33870_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12572:38529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11959:40723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12132:48223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12132:48223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12132:48223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:12132:48223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:6866:52368_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:11476:54644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:16041:55533_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1620:55762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7797:60626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14993:63216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3574:64533_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3574:64533_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3574:64533_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3574:64533_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:9396:67714_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3016:70139_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17172:69979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14544:71211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2099:71352_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5438:73322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5438:73322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5438:73322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:5438:73322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4985:76131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:7580:77571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7253:79584_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7253:79584_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7253:79584_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:7253:79584_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:18694:82984_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4823:86183_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:17528:87505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3236:89767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3236:89767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3236:89767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:3236:89767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:4018:93598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:1376:94353_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2322:97572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:14893:98468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:20485:97800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:13675:98174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1113:2170:101061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16264:4277_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12123:5328_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12123:5328_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12123:5328_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12123:5328_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12212:11067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:6940:12419_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9612:13795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7414:14961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7414:14961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7414:14961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7414:14961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9897:20578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18932:25725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9929:27219_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2217:28789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2217:28789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2217:28789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2217:28789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4451:30186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7764:31553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_1:N:0:GGTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_1:N:0:GGTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18775:35839_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7884:37084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7884:37084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7884:37084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7884:37084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:11867:37659_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:11867:37659_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:11867:37659_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:11867:37659_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3860:39621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3860:39621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3860:39621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3860:39621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9621:39582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16036:41270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4931:41709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17374:42986_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2152:43448_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:15707:49849_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3546:51561_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16481:52757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12673:53725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16962:54896_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18424:55725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2177:60088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3102:60336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3102:60336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3102:60336_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:3102:60336_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2958:60989_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9695:62201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:12651:67919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18727:72337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18727:72337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18727:72337_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:18727:72337_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:17912:76288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:14011:77549_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20945:77973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20945:77973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20945:77973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20945:77973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:20393:79927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:8965:80495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:8965:80495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:8965:80495_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:8965:80495_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:2042:83479_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:10827:84058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:10827:84058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:10827:84058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:10827:84058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4441:85671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4441:85671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4441:85671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:4441:85671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:16526:86845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:9727:87359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:13296:89963_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1101:7563:97861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12236:2599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:11606:3660_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1940:3993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6901:7454_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5968:9798_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15689:10582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15689:10582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15689:10582_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15689:10582_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10472:12827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14350:14776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18749:15712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18749:15712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18749:15712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18749:15712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20040:16442_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20040:16442_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20040:16442_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20040:16442_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20436:19500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5057:20996_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5057:20996_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5057:20996_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5057:20996_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10137:20918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6749:22764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6749:22764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6749:22764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6749:22764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4568:23113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4568:23113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4568:23113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4568:23113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7030:26338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2319:28092_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20639:29789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7209:38437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7209:38437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7209:38437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:7209:38437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:17703:38821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6529:39591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15321:40573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9514:42370_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:1965:43055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10418:45177_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20271:48930_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20271:48930_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20271:48930_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20271:48930_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13684:51031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3478:54923_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:10151:65518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2208:67318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14740:67258_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:5887:71579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13545:71688_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19897:73193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:15857:78094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:13977:79075_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:12093:80052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:16247:80102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:19604:80241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:6575:81288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1835:87782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1835:87782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1835:87782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:1835:87782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4193:88261_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:18111:88509_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:20242:90649_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:14421:91223_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 17000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:4390:93803_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3755:95647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3755:95647_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3755:95647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:3755:95647_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9280:95737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9280:95737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9280:95737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:9280:95737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1102:2993:101138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9848:2807_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9848:2807_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9848:2807_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9848:2807_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8996:3624_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3267:4769_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3267:4769_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3267:4769_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3267:4769_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7015:4831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:14376:6129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:14376:6129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:14376:6129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:14376:6129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6645:7956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20079:8213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16496:12079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11717:12592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12902:15715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11156:17503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:1796:20918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17549:24372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2497:24703_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5012:25644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19966:26696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8890:27206_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8890:27206_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8890:27206_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8890:27206_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9183:30090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5649:31447_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9962:32242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4497:34301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18642:34422_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:11165:40029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6002:44150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6002:44150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6002:44150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:6002:44150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9019:44357_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9019:44357_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9019:44357_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9019:44357_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9358:45190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17142:45577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17142:45577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17142:45577_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17142:45577_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:4365:47241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3722:48006_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2256:53426_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2256:53426_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2256:53426_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2256:53426_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7296:54724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:16086:55032_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:18255:55600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:8856:58066_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13489:59458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:7773:65477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19205:65627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:12369:68063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3544:71229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20446:71306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20446:71306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20446:71306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20446:71306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20675:73973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20675:73973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20675:73973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:20675:73973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:2985:78316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:5333:78440_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9636:79886_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19665:84934_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:3386:91862_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:9020:92220_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:13565:93018_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19530:93439_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19530:93439_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19530:93439_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:19530:93439_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1116:17458:99524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:11909:3224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:11909:3224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:11909:3224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:11909:3224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15904:3927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5978:7736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18575:11208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8041:11881_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3898:12969_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17894:13558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20690:15946_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20690:15946_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20690:15946_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20690:15946_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:16290:20746_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5196:21420_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3247:23185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12438:24021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12438:24021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12438:24021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12438:24021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:4437:26970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:18336:29189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9656:31778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9656:31778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9656:31778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9656:31778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:7494:32390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10666:37109_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10288:37656_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10288:37656_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10288:37656_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:10288:37656_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8493:40077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8493:40077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8493:40077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8493:40077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12078:40031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6901:41930_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10345:43806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10345:43806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10345:43806_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:10345:43806_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:8818:49651_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5592:49980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5592:49980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5592:49980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:5592:49980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12774:52454_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:6930:57482_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3036:57780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15239:58883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9991:60105_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20715:63698_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:17997:67156_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9485:68785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15944:70141_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12320:71621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:13779:72033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2529:72692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:3060:82664_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2950:85586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2842:85435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2842:85435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2842:85435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2842:85435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20617:86593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17053:88531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17053:88531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17053:88531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:17053:88531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:19027:92757_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:15086:94187_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12501:94991_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2645:95666_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:12915:95557_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:2495:96692_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:1719:98113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20921:100080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20921:100080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20921:100080_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:20921:100080_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9090:100569_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9090:100569_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9090:100569_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1114:9090:100569_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19905:5306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18649:7043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1888:14766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10337:15579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:13341:15621_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4741:17103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7510:17138_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11905:17060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11905:17060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11905:17060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11905:17060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3897:18149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3897:18149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3897:18149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3897:18149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11692:18288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11692:18288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11692:18288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11692:18288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7164:19190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4706:19614_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:9686:28642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18846:29771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:5260:31098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12529:31394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17662:35844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4124:38924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:11392:41662_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19057:46052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18854:47696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18854:47696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18854:47696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:18854:47696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:20059:47604_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3864:50502_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10199:53241_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:14948:55648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:14948:55648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:14948:55648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:14948:55648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:7386:60953_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:10280:62850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1878:64338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:14068:66955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:14068:66955_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:14068:66955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:14068:66955_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19656:69129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12822:74306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:17192:74364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15022:77469_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:1856:80578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15545:80638_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6199:82602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6199:82602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6199:82602_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6199:82602_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:3750:86995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12995:87364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:21099:87291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:15954:91013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:4361:91329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6424:91761_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:12394:96058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:6813:97103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1112:19751:100189_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14571:5387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2020:7717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7079:7505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:3196:9466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19752:11452_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14741:12729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5778:13477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12529:14846_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12529:14846_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12529:14846_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12529:14846_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:13721:15564_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4353:17387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6627:18047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7040:18295_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6126:21458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6126:21458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6126:21458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6126:21458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14005:22450_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4874:22583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4044:22587_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2405:22918_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:11108:24332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15217:24412_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17618:28799_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12139:31380_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17991:31475_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:8306:33152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16521:36445_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:17490:38240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12123:39192_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11441:41255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11441:41255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11441:41255_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:11441:41255_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:5694:43873_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7610:46011_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3869:46590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3869:46590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3869:46590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:3869:46590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:6806:50773_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9834:54548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:21126:54543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:21126:54543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:21126:54543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:21126:54543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:9637:56892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10101:57125_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10101:57125_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10101:57125_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10101:57125_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1508:57589_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:7252:57579_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:2898:62863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18751:67570_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10936:73012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10936:73012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10936:73012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10936:73012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:19186:76271_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:4066:78453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10489:79529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10489:79529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10489:79529_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10489:79529_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8513:80508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8513:80508_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8513:80508_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:8513:80508_1:N:0:GATCAG/1/1' because it was < 2 characters long Processed 18000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:15051:86203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12476:87055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12476:87055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12476:87055_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12476:87055_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:16665:89693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:1871:90030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:10420:90687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:12627:95455_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14010:96562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14010:96562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14010:96562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:14010:96562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18557:100367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18557:100367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18557:100367_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1105:18557:100367_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4249:3087_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19692:4754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19692:4754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19692:4754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19692:4754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11358:5304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11358:5304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11358:5304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11358:5304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9554:8145_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9554:8145_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9554:8145_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9554:8145_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4728:8530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11182:13263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11182:13263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11182:13263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11182:13263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:8716:21169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:8716:21169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:8716:21169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:8716:21169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4258:28933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4258:28933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4258:28933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4258:28933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:17453:29305_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:17453:29305_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:17453:29305_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:17453:29305_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5623:30042_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20656:32260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15315:36244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19573:36209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4776:37845_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11887:38403_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6388:39090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6658:39946_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6658:39946_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6658:39946_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:6658:39946_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3817:41239_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3817:41239_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3817:41239_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3817:41239_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10212:43428_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:4795:43525_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_1:N:0:GCTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_1:N:0:GCTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_1:N:0:GCTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_1:N:0:GCTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7532:48470_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20777:48592_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12062:49160_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:19062:49173_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7312:49280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7598:54950_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7598:54950_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7598:54950_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:7598:54950_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:10258:57043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3591:59882_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3591:59882_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3591:59882_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3591:59882_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9536:62081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20928:62029_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5221:63853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:9199:65482_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12584:68155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12584:68155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12584:68155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12584:68155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15124:68808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9605:70741_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9605:70741_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9605:70741_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:9605:70741_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5378:71133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5378:71133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5378:71133_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:5378:71133_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:2411:71605_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3604:73660_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3604:73660_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3604:73660_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3604:73660_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3760:74911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3760:74911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3760:74911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3760:74911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:11961:77053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15117:83396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:3696:83569_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:18254:83627_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:13162:87100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13336:91903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13336:91903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13336:91903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:13336:91903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:14321:93207_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:12899:94325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:20121:94393_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15771:95344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15771:95344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15771:95344_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1103:15771:95344_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18754:96637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18754:96637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18754:96637_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1103:18754:96637_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18996:5119_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13888:6453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2045:21301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20541:25967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:6822:26478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:1729:27940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:1729:27940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:1729:27940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:1729:27940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13314:30270_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4392:31200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5459:31461_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20902:32086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5831:35163_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9534:35035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9534:35035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9534:35035_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9534:35035_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:9130:36912_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13556:37250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12392:37320_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2412:39309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2412:39309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2412:39309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:2412:39309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7855:41200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:8545:43574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:8545:43574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:8545:43574_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:8545:43574_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13099:44277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13099:44277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13099:44277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:13099:44277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4940:45030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5880:48675_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5432:51203_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17972:57392_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12836:58677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17916:60375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17916:60375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17916:60375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:17916:60375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5261:63694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5261:63694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5261:63694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:5261:63694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19676:63618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12456:64673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:3958:69972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:16169:71186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:15599:72618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18809:74504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18809:74504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18809:74504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18809:74504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18690:74772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:12101:75715_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:4445:77198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:14415:77511_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9177:78595_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9177:78595_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9177:78595_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:9177:78595_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:7056:81158_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10562:82980_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:20604:85060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:10046:87289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:11822:88968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:11822:88968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:11822:88968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:11822:88968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18373:92144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18373:92144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18373:92144_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:18373:92144_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2209:19738:98789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14294:2210_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14294:2210_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14294:2210_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14294:2210_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19185:5952_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13983:7725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:10520:9166_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:10520:9166_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:10520:9166_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:10520:9166_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:12088:9901_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2058:13214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15438:13419_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8936:13505_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19652:16607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16537:20411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4550:21470_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:15766:21252_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16487:21936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17236:27326_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16339:33729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:5745:35758_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:5745:35758_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:5745:35758_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:5745:35758_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3863:36074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2474:39409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16244:41436_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17989:42139_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4103:42385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:2833:44473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:4952:45300_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:13458:45415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6596:48049_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20751:49010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1359:49642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1359:49642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1359:49642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1359:49642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7737:50770_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16512:51229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16104:54134_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16104:54134_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16104:54134_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16104:54134_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1796:56477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:1999:62534_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20219:64054_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20219:64054_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20219:64054_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20219:64054_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20264:65010_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:6637:68556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:8240:68792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14128:69657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19357:69707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11868:71331_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18066:75148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18066:75148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18066:75148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18066:75148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11588:76214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11588:76214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11588:76214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11588:76214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:20833:77921_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18187:78359_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3801:78562_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14065:78717_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7763:80182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7763:80182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7763:80182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7763:80182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:19071:80699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:17780:83962_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:11148:89668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:7827:91553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:16206:97223_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:18783:98982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3454:100169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3454:100169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3454:100169_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:3454:100169_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2210:14754:100696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3231:7017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10084:9083_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:12019:12533_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8380:12935_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:3762:13449_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10231:15263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10231:15263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10231:15263_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:10231:15263_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8241:17218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9422:20744_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1374:20768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1374:20768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1374:20768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1374:20768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6197:21571_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14473:22473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11664:23416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:5542:24956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15294:27483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15294:27483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15294:27483_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15294:27483_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8098:31629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:17020:32847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:17020:32847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:17020:32847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:17020:32847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2892:34132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2892:34132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2892:34132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2892:34132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18172:41000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18172:41000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18172:41000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18172:41000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4127:43079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4127:43079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4127:43079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4127:43079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8820:43262_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8820:43262_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8820:43262_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8820:43262_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7639:45681_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7639:45681_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7639:45681_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7639:45681_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1569:45893_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13877:48993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:11940:51069_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:19604:51132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:19604:51132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:19604:51132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:19604:51132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:8306:51459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6168:57933_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:59225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:6567:59700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2313:61363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16553:64690_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:7329:66853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:4851:69438_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13579:69976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13579:69976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13579:69976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13579:69976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:14398:74123_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16646:75226_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 19000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:9814:76398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18226:78122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:15450:81547_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2028:88135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2028:88135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2028:88135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:2028:88135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:13905:91690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16882:92850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:18493:94243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:1820:95750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1108:16450:99504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8561:3172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8561:3172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8561:3172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8561:3172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14370:3036_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3513:4940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4604:4974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4604:4974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4604:4974_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4604:4974_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13649:7817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15040:11270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6437:12109_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:21366:12190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:21366:12190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:21366:12190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:21366:12190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19502:13375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19502:13375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19502:13375_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19502:13375_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16534:16244_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17041:16535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17041:16535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17041:16535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17041:16535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2589:18165_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15525:21640_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:12141:24224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19794:24489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5384:24684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17347:25347_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15439:29265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15439:29265_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15439:29265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15439:29265_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19634:32129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11398:33325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8593:34707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8593:34707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8593:34707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8593:34707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16209:37129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16209:37129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16209:37129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16209:37129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2017:40350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2243:41654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5568:45430_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14473:46901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17952:54943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14383:58000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14383:58000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14383:58000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:14383:58000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17461:58099_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8861:58600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8861:58600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8861:58600_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8861:58600_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18340:59009_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4915:59554_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18962:65346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18962:65346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18962:65346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18962:65346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11761:66078_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5855:66260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5855:66260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5855:66260_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5855:66260_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:5634:68961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19253:70039_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19253:70039_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19253:70039_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:19253:70039_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:7900:72911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:7900:72911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:7900:72911_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:7900:72911_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18501:72980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18501:72980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18501:72980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:18501:72980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6908:74142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:16199:75673_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:6904:77724_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8601:77535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11305:80107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6069:80827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6069:80827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6069:80827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:6069:80827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11852:81498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11852:81498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11852:81498_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:11852:81498_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8697:82216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4911:82350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:9392:84213_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13141:84360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:15089:87874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:20986:89476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:20986:89476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:20986:89476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:20986:89476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2217:94061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2217:94061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2217:94061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:2217:94061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4839:94369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4839:94369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4839:94369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:4839:94369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:8579:94888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:10672:96218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:10672:96218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:10672:96218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:10672:96218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13296:96348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13296:96348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13296:96348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13296:96348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3113:98330_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3113:98330_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3113:98330_2:N:0:GATCCG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:3113:98330_2:N:0:GATCCG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:17118:99325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1106:13173:100188_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7737:2817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5569:4524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15951:7048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:21182:13451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:21182:13451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:21182:13451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:21182:13451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15136:19568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15136:19568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15136:19568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15136:19568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4838:19762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2681:21823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17457:22667_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6104:24242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6017:25916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6017:25916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6017:25916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6017:25916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3939:26199_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14066:28278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:12737:29879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7604:30107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13767:30473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3439:31110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8883:32636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13836:32630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10615:33851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10615:33851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10615:33851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10615:33851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2062:37635_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8902:37970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8902:37970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8902:37970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8902:37970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4079:38644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14272:39389_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17595:42239_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:16334:42558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15751:42931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10816:45496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14704:49057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7263:51785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7263:51785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7263:51785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7263:51785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:18184:54583_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:18184:54583_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:18184:54583_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:18184:54583_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4443:54959_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5934:56228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5934:56228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5934:56228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:5934:56228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19531:56245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19531:56245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19531:56245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19531:56245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6959:58416_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14048:61105_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14048:61105_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14048:61105_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14048:61105_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10655:63506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:9111:64933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:9111:64933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:9111:64933_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:9111:64933_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17912:66030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17912:66030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17912:66030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17912:66030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:14953:67919_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_1:N:0:GACCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_2:N:0:GACCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_1:N:0:GACCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:17878:72245_2:N:0:GACCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2931:71844_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:15567:75553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16736:76038_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16736:76038_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16736:76038_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:16736:76038_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:20653:80507_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:20653:80507_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:20653:80507_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:20653:80507_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11368:82302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11368:82302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11368:82302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11368:82302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:8970:84926_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11025:84820_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11139:87300_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11139:87300_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11139:87300_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:11139:87300_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:2223:89013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:10430:94247_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:4468:94690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6741:94862_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6741:94862_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6741:94862_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6741:94862_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:9878:96530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:9878:96530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:9878:96530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:9878:96530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3319:96978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3319:96978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3319:96978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3319:96978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:7338:96999_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:3573:97704_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:6843:99878_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:19658:100645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13701:100790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13701:100790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13701:100790_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:1104:13701:100790_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20614:2819_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1969:6008_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7567:6125_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7177:9318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7177:9318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7177:9318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7177:9318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2497:12526_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8120:15191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:5521:15384_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:5521:15384_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:5521:15384_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:5521:15384_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9378:16200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7080:19159_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:11493:25970_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6000:26618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8051:27781_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14610:28685_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:1733:32143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13901:33547_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13901:33547_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13901:33547_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13901:33547_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9874:36301_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13488:37224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7556:40654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20798:42409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15872:45396_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17630:47477_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:14860:49106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18652:58792_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:8220:61245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:7185:62823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:13627:70854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:17779:74476_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2492:75190_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:12939:79198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:18160:82552_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:6353:83063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:2107:84713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:20980:85591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:10495:87713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:10495:87713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:10495:87713_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:10495:87713_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9284:96898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9284:96898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9284:96898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:9284:96898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15807:98369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15807:98369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15807:98369_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:15807:98369_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2213:19503:99217_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13881:4800_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2992:6581_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3851:9750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3851:9750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3851:9750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3851:9750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8087:11492_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6389:14558_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16251:17514_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:1759:18687_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11892:21279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11892:21279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11892:21279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11892:21279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8984:24225_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20338:26465_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11841:27149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:9877:29883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:9877:29883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:9877:29883_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:9877:29883_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:10932:33216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15776:33892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15776:33892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15776:33892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15776:33892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:4637:35379_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:18938:39868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:11827:44741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16656:45675_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16656:45675_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16656:45675_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:16656:45675_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:13267:49943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12938:51594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:6866:52091_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15315:53665_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:15127:54319_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12278:61273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:20974:61437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:17802:65645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:8273:66390_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 20000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:12661:70150_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2720:78227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3618:84774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3618:84774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3618:84774_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3618:84774_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:21097:85013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:2822:90700_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:19804:90737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13291:92026_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13291:92026_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13291:92026_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:13291:92026_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:3595:93936_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:14410:94693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16812:96575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16812:96575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16812:96575_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2211:16812:96575_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17255:5655_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6475:8489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15527:14050_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10622:20434_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:21280:22030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:21280:22030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:21280:22030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:21280:22030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5548:22968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2491:24268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11540:28644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15444:36474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:15981:36339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:8439:38922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:8439:38922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:8439:38922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:8439:38922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3209:40900_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1848:42353_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13582:43077_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:6830:44088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1593:48665_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1593:48665_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1593:48665_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1593:48665_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10272:50198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17366:50990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14061:52842_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9094:53859_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2885:56897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2885:56897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2885:56897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2885:56897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17534:57031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17534:57031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17534:57031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17534:57031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10575:57407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14073:58462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:5143:61281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:8435:63684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:8435:63684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:8435:63684_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:8435:63684_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13385:66153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13385:66153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13385:66153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13385:66153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13014:67610_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:2599:68743_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:16011:68765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10063:69037_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9399:70154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17528:79354_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1197:79513_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:1408:79917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:9686:80245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13488:82285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3987:82633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3987:82633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3987:82633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3987:82633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14672:83100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14672:83100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14672:83100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14672:83100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14678:85506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3655:91824_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3791:92110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3791:92110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3791:92110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:3791:92110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:10751:93030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:17910:96945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:13140:97285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11994:97710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11994:97710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11994:97710_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:11994:97710_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2216:14919:98838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4561:2857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18025:3772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1928:4657_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8160:5111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14779:7334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2467:7527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5951:9013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11093:12954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:15106:12940_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14487:13356_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10152:13975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6516:15021_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:20680:15733_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:20680:15733_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:20680:15733_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:20680:15733_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19450:17556_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14627:20520_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9454:21543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9454:21543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9454:21543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9454:21543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7408:21982_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12562:25863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19134:28466_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10274:30309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10274:30309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10274:30309_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10274:30309_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6109:35086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6109:35086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6109:35086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6109:35086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10231:40593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10231:40593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10231:40593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:10231:40593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:12686:41702_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:5724:45317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11242:47553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11242:47553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11242:47553_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:11242:47553_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3077:49054_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14859:51427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1540:55931_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:17463:58376_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3238:60473_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18794:63211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7999:65458_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:8294:65346_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2097:69971_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6431:71605_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19538:71748_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13666:73545_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13666:73545_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13666:73545_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13666:73545_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6543:74386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:2944:75958_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7769:76293_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7769:76293_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7769:76293_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:7769:76293_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:19581:79885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18704:81654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18704:81654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18704:81654_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:18704:81654_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4419:82815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:6119:84489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:3910:84935_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:14206:91826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13111:93850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:16954:93811_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:9043:96007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:1837:98065_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4856:98857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4856:98857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4856:98857_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:4856:98857_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2214:13185:100339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14207:6020_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14332:10177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14332:10177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14332:10177_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:14332:10177_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5417:10355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3824:13245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5525:15684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5525:15684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5525:15684_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5525:15684_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5635:19107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20360:20503_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2191:22472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_1:N:0:GATAAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_2:N:0:GATAAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_1:N:0:GATAAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19716:22649_2:N:0:GATAAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:5675:25374_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20227:28851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14966:29394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14966:29394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14966:29394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:14966:29394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4876:29560_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7366:30143_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13458:34459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13458:34459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13458:34459_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13458:34459_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18730:35517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:17650:36964_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:17650:36964_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:17650:36964_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:17650:36964_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13578:37224_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4415:39943_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:20458:43815_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4345:45291_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19778:47768_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:8558:49480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:8558:49480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:8558:49480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:8558:49480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:4404:50739_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:19955:51409_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13826:51648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:2967:55363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:12986:55406_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9376:60371_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3662:60593_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13523:63186_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18583:64983_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:11565:73480_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9478:76057_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18685:76590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:3671:80090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15863:81407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15863:81407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15863:81407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15863:81407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:1584:82372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13760:91228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18347:91174_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:18593:91129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:9593:93506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:13356:95328_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7041:97245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7041:97245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7041:97245_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:7041:97245_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2212:15799:97163_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13615:2794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13615:2794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13615:2794_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13615:2794_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14314:2750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9000:4007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8617:4338_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9094:5226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9094:5226_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9094:5226_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9094:5226_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17014:5267_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20456:7676_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3380:8140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3380:8140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3380:8140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3380:8140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9077:9201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8439:10049_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8439:10049_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8439:10049_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8439:10049_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3863:10431_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11828:15417_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11828:15417_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11828:15417_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11828:15417_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5220:15548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21299:17299_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21299:17299_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21299:17299_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21299:17299_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5521:18397_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8777:20629_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9333:21163_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3170:21745_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20129:25202_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15413:25273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15413:25273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15413:25273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15413:25273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:12905:31215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11778:31765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15238:33925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15238:33925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15238:33925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15238:33925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5808:35599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19102:37334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15953:38007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15953:38007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15953:38007_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15953:38007_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13123:39917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13123:39917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13123:39917_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:13123:39917_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15949:44478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15949:44478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15949:44478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15949:44478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15585:50211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:1824:50942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:1824:50942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:1824:50942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:1824:50942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8123:51228_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:16720:52017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:16720:52017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:16720:52017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:16720:52017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6789:53196_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8414:55307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8414:55307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8414:55307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8414:55307_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 21000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15910:58230_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14901:65693_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6151:68603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9732:70559_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4751:71863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4751:71863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4751:71863_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4751:71863_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18248:72191_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:4392:73365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5579:75005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8129:78086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:21153:78848_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:7208:80831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6298:82033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6298:82033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6298:82033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:6298:82033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:18927:82405_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11561:85363_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:20272:85429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14342:87306_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3528:88394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3528:88394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3528:88394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3528:88394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9371:91084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:19254:95005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5348:95500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5348:95500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5348:95500_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:5348:95500_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11813:96154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11813:96154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11813:96154_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:11813:96154_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:2597:96415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:2597:96415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:2597:96415_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:2597:96415_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:9099:97826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17851:97898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17851:97898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17851:97898_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:17851:97898_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:15919:98351_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:8773:99950_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:14546:101102_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2301:3502:101364_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19813:5111_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4086:5411_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9311:7040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9311:7040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9311:7040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9311:7040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20613:7288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17853:9079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:6567:11075_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14576:13303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17899:13957_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9018:14704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9018:14704_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9018:14704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9018:14704_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16507:16017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16507:16017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16507:16017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16507:16017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7111:17675_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:2762:18885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9077:19081_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12935:19636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20025:21404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12121:25140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:3161:26218_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16293:26087_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16293:26087_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16293:26087_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16293:26087_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5115:29550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7123:29113_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10598:29043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10598:29043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10598:29043_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10598:29043_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1554:30147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:5307:30063_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20441:31172_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9369:32603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13750:36755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9810:37286_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:4317:38941_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15284:39677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15284:39677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15284:39677_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15284:39677_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16550:39899_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20831:42512_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20831:42512_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20831:42512_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20831:42512_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13088:45139_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13088:45139_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13088:45139_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13088:45139_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13691:45131_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19899:47355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19899:47355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19899:47355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19899:47355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12642:48668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13226:48853_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17511:50185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:11908:50407_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14823:50712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8032:56429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:7308:60546_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:1188:60924_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12085:61313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12085:61313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12085:61313_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12085:61313_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:13708:62456_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16677:64528_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12966:65636_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9933:67728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10770:68281_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:12220:69856_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15341:70690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15341:70690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15341:70690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15341:70690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:20041:74766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:14551:77285_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17334:78067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17334:78067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17334:78067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:17334:78067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18466:81365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18466:81365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18466:81365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18466:81365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16818:83153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17869:88881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17869:88881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17869:88881_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:17869:88881_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:15517:89398_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:10524:95411_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:18174:96486_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:19703:96994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:9501:97791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:16287:98487_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2302:8548:100978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:11008:3330_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20498:5544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:7182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:7182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:7182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:7182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5628:9318_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12997:13088_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5280:17680_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3887:19255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3887:19255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3887:19255_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3887:19255_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20885:20343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20885:20343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20885:20343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20885:20343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16080:20555_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19392:23061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19481:23132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1378:25003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1378:25003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1378:25003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1378:25003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6477:25517_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15289:26296_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8741:26530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12756:28074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12756:28074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12756:28074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12756:28074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:20715:32410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14277:32548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4622:36569_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4622:36569_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4622:36569_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4622:36569_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5688:38804_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17936:39349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14522:41267_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7168:44750_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10672:45961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13569:46069_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13569:46069_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13569:46069_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13569:46069_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8678:48240_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7048:48316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7048:48316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7048:48316_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7048:48316_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:5030:49175_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19976:50484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:17596:51423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:3362:52968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19818:52796_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10753:53451_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:15781:58098_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19625:58826_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:4145:63152_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16016:65968_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:2510:66634_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1931:67005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16453:69211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16453:69211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16453:69211_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16453:69211_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:69067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:69067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:69067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:21305:69067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:10076:71000_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:8642:73755_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:16690:74178_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:18000:75827_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:1724:77443_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19935:80716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9706:81107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9706:81107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9706:81107_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9706:81107_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13206:81860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13206:81860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13206:81860_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:13206:81860_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:12465:82148_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14512:82302_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:7972:86040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:14029:89780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:19716:90962_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:6496:93699_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9267:99257_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9267:99257_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9267:99257_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2303:9267:99257_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13781:4544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20107:5048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4394:6504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14452:7283_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13911:8300_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13911:8300_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13911:8300_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13911:8300_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8005:9059_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8005:9059_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8005:9059_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8005:9059_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13517:14048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2948:17966_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18489:21916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1444:22046_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:21057:23348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5691:29307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12592:29612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8512:31756_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8512:31756_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8512:31756_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8512:31756_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9370:32771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9370:32771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9370:32771_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9370:32771_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14627:34839_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14627:34839_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14627:34839_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:14627:34839_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9469:40384_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9469:40384_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9469:40384_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9469:40384_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2647:41128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12187:45132_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:11911:45716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:11911:45716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:11911:45716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:11911:45716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:13852:48164_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18926:50479_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12258:50902_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12258:50902_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12258:50902_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:12258:50902_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4114:52993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4114:52993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4114:52993_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4114:52993_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8484:54018_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8484:54018_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8484:54018_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8484:54018_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:4469:56854_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:3304:57004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:3304:57004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:3304:57004_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:3304:57004_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:9136:57179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6412:58329_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6620:62332_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16428:64615_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2068:64920_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2068:64920_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2068:64920_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:2068:64920_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15209:70345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5585:70727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16191:72801_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15476:73817_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1827:77879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8942:79520_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14591:81877_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14591:81877_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14591:81877_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14591:81877_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8901:81468_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:6071:84618_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10608:85278_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:10394:85872_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:5344:87372_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_1:N:0:GATCAC/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_2:N:0:GATCAC/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_1:N:0:GATCAC/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:1471:87974_2:N:0:GATCAC/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18542:87945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18542:87945_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18542:87945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18542:87945_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:8964:88168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15044:88108_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16548:88485_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16548:88485_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16548:88485_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:16548:88485_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:18808:88288_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:20099:88645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:15135:93277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14986:100736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14986:100736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14986:100736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2305:14986:100736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9061:4220_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1929:6803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1929:6803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1929:6803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1929:6803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18600:10938_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18600:10938_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18600:10938_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18600:10938_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18640:11405_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18236:12322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1233:14200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1233:14200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1233:14200_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1233:14200_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11904:15869_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11904:15869_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11904:15869_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11904:15869_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17076:16013_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7257:17435_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20729:19502_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20729:19502_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20729:19502_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20729:19502_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:10562:20305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5278:25736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6052:31048_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6313:33374_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18616:37090_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11032:38467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11032:38467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11032:38467_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11032:38467_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8801:41041_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:2839:41972_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14030:42087_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3399:42488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3399:42488_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3399:42488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3399:42488_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:15397:42491_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:17977:42950_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9793:45256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9793:45256_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9793:45256_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:9793:45256_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 22000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18181:47518_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_1:N:0:GATCTG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_2:N:0:GATCTG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_1:N:0:GATCTG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20531:48553_2:N:0:GATCTG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7021:49980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11088:51287_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11088:51287_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11088:51287_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:11088:51287_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:5097:52908_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4394:54484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:7868:56868_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:12115:57812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:4602:58182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:58892_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6125:59985_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:8704:71569_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:19321:74765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:19321:74765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:19321:74765_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:19321:74765_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6923:75589_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:20797:79275_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6987:80058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6987:80058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6987:80058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6987:80058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:16743:81016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12534:85023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12534:85023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12534:85023_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:12534:85023_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6767:88044_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:18972:89100_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:14310:90429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:21307:95071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:21307:95071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:21307:95071_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:21307:95071_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:3106:98180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:1963:98837_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2309:6141:100707_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4601:5778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4601:5778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4601:5778_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4601:5778_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18788:6067_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:3857:7179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16369:8153_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:11663:8355_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19711:8365_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10773:9404_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4574:10236_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:5598:11661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8832:14874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8832:14874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8832:14874_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8832:14874_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8563:17524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8563:17524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8563:17524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8563:17524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4945:17791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14194:18292_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7661:23998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7661:23998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7661:23998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7661:23998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8447:23827_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15062:26925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:21035:29343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:21035:29343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:21035:29343_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:21035:29343_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8372:29978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2538:35537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_1:N:0:GATCGG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2538:35537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_2:N:0:GATCGG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_1:N:0:GATCGG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1368:35668_2:N:0:GATCGG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2538:35537_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2538:35537_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12060:37754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20506:41861_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4977:46195_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12935:48504_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20886:52927_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:12815:53254_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2118:56387_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19466:61149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2761:62274_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20813:65402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20813:65402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20813:65402_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:20813:65402_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15299:69429_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15355:72236_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2617:75885_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4061:76594_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13807:77722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13807:77722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13807:77722_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13807:77722_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1659:78543_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:13985:78780_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:19593:80954_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2449:83394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:4994:83709_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:15573:83735_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:1785:91394_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10076:92414_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:10101:92661_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:16634:93481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14642:93812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:14621:94539_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:7269:96484_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:18310:96906_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13165:99312_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13165:99312_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13165:99312_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:13165:99312_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:2628:100763_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2310:8980:101052_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9779:2795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5433:4176_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14915:4705_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7740:4804_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4714:8478_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3709:10831_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:1122:13597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20689:13506_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13858:15139_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13858:15139_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13858:15139_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13858:15139_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14312:15135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10537:16259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17962:16833_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17962:16833_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17962:16833_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17962:16833_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:5411:18808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:16107:20578_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_1:N:0:CATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_1:N:0:CATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_1:N:0:CATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_2:N:0:CATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_1:N:0:CATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13560:24074_2:N:0:CATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:7515:30706_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:10311:33125_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8758:33904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14016:35903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18048:36304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:20623:36348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8824:36874_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8824:36874_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8824:36874_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8824:36874_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17300:37563_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17300:37563_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17300:37563_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17300:37563_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17160:50676_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17160:50676_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17160:50676_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17160:50676_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:14341:58243_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:9290:60803_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:4921:64136_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:3830:65975_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18892:75727_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17632:76493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17632:76493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17632:76493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:17632:76493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18201:77888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8139:80650_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:18330:82423_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8061:83901_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:12180:84922_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:11470:85158_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:11470:85158_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:11470:85158_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:11470:85158_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:15095:86531_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:8046:95349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13561:100967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13561:100967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13561:100967_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2308:13561:100967_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18210:9938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16112:15596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20764:19142_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7782:21642_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20402:23246_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6517:23690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6517:23690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6517:23690_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6517:23690_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:18092:23586_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11912:25252_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10215:26031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21306:26103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21306:26103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21306:26103_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21306:26103_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11993:27712_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:9788:28155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15243:31280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15243:31280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15243:31280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15243:31280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2201:32298_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15816:32736_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4218:34179_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15615:35229_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6655:37193_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16085:38766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16085:38766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16085:38766_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:16085:38766_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7651:42444_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7651:42444_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7651:42444_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7651:42444_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21174:44527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21174:44527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21174:44527_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21174:44527_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:1562:44961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:1562:44961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:1562:44961_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:1562:44961_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15559:45544_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17653:45897_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21309:50591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21309:50591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21309:50591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21309:50591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11141:53117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:10812:58304_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15919:60748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15919:60748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15919:60748_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15919:60748_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21304:60966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21304:60966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21304:60966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:21304:60966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11968:61197_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15461:64427_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3122:67493_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4096:67788_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4096:67788_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4096:67788_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4096:67788_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14273:70253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14273:70253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14273:70253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14273:70253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14261:73390_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2521:74019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:14879:75047_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5613:77772_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_1:N:0:GAGCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_2:N:0:GAGCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_1:N:0:GAGCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:5902:81340_2:N:0:GAGCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:2480:84395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:8426:85072_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:6856:85767_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19796:87162_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:11721:89303_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:17946:91060_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:7496:92674_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:3660:93310_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:20452:93360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:13768:95668_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:12657:98289_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:4421:98966_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15943:99202_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15943:99202_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15943:99202_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:15943:99202_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19001:100718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19001:100718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19001:100718_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2304:19001:100718_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13944:6779_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18279:12117_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19586:13708_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19586:13708_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19586:13708_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19586:13708_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_1:N:0:GATTAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_2:N:0:GATTAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_1:N:0:GATTAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20458:13555_2:N:0:GATTAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:1374:15923_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:1374:15923_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:1374:15923_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:1374:15923_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14530:16858_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3524:16776_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5962:17326_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19033:17632_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19389:19444_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14216:19857_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16702:24470_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4002:26470_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12544:26729_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12544:26729_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12544:26729_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12544:26729_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:14080:27250_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13985:28418_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 23000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:16434:32350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13160:32994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12181:33085_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12181:33085_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12181:33085_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12181:33085_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10658:38279_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20379:38307_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5374:38513_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4964:39360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2883:42198_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19839:43720_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:3997:53221_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5733:53584_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7597:53538_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20308:56180_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2528:57381_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15576:58030_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:18600:62808_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:7909:64694_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4010:65036_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4010:65036_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4010:65036_2:N:0:GGTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:4010:65036_2:N:0:GGTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:9005:65633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:9005:65633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:9005:65633_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:9005:65633_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5082:65980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:20794:68489_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:19190:71104_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5131:72168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5131:72168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5131:72168_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5131:72168_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13556:74606_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13556:74606_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13556:74606_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13556:74606_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:12133:76053_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:5586:76408_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:21173:78031_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:15979:79249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10020:81851_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10020:81851_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10020:81851_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10020:81851_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:2529:83317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:17497:84201_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:1542:90795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:1542:90795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:1542:90795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:1542:90795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:6937:91496_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:13858:93280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2311:10373:99350_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3464:2479_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10828:2345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10828:2345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10828:2345_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10828:2345_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13744:4129_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13272:6253_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19082:8106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19082:8106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19082:8106_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19082:8106_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3939:8340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3939:8340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3939:8340_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3939:8340_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:10155:10464_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13963:13959_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13963:13959_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13963:13959_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13963:13959_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12938:15061_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:6689:18207_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12534:18612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12534:18612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12534:18612_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12534:18612_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2033:20208_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13290:20893_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13149:23535_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:19403:25573_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12108:30322_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8998:32723_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20493:40524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20493:40524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20493:40524_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20493:40524_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12433:41795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4958:42214_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2121:42327_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:8429:42388_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13066:42360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13066:42360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13066:42360_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13066:42360_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12246:43741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4393:44395_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16199:47348_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:5307:47729_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7852:49737_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4918:50721_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4918:50721_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4918:50721_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4918:50721_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3483:50762_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:9270:51317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:9270:51317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:9270:51317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:9270:51317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14098:55590_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16198:56795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16198:56795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16198:56795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16198:56795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:14265:57548_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:13490:60033_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3572:65599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3572:65599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3572:65599_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:3572:65599_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7669:67916_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20049:67957_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12263:72472_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:20213:72854_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:12148:73140_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:7631:76460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_1:N:0:AATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_2:N:0:AATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_1:N:0:AATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:15522:77745_2:N:0:AATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:16237:89852_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:4458:91094_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2313:2907:99821_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:4937_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:4937_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:4937_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:4937_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9233:7670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9233:7670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9233:7670_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9233:7670_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5896:8268_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21307:8596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21307:8596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21307:8596_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21307:8596_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11403:8836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11403:8836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11403:8836_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11403:8836_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19227:9453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19227:9453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19227:9453_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19227:9453_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3179:10978_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17390:12307_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10396:14706_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10396:14706_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10396:14706_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10396:14706_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15832:15841_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:19242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:19242_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:19242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:21309:19242_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:5262:21222_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19266:22421_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20411:24005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20411:24005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20411:24005_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20411:24005_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14332:24455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14332:24455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14332:24455_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14332:24455_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:13777:26583_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4847:27566_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15900:28481_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9099:31019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9099:31019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9099:31019_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9099:31019_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18508:32185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:9163:36386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15111:36519_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17102:36695_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_1:N:0:TATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_2:N:0:TATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_1:N:0:TATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:8735:41180_2:N:0:TATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7615:41258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7615:41258_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7615:41258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7615:41258_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16178:43391_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17340:45738_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7233:46782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7233:46782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7233:46782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7233:46782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11642:46992_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:2491:47110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:2491:47110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:2491:47110_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:2491:47110_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:3796:51079_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18381:51012_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17817:54741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17817:54741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17817:54741_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17817:54741_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7874:55626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15834:58068_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:17901:59789_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20182:61761_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6543:62879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6543:62879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6543:62879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6543:62879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19584:64017_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20350:64182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20350:64182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20350:64182_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:20350:64182_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7820:64925_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16951:65280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16827:66084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16827:66084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16827:66084_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:16827:66084_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:14419:69903_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11425:73126_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:6915:73607_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3405:75590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3405:75590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3405:75590_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:3405:75590_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:12721:79888_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15315:86230_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15315:86230_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15315:86230_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:15315:86230_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18558:86838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18558:86838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18558:86838_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:18558:86838_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:11152:89122_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:1103:90568_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10314:90645_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:4752:90904_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20653:92053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20653:92053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20653:92053_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:20653:92053_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:7671:93648_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19697:95135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19697:95135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19697:95135_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:19697:95135_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2306:10778:100460_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15504:2902_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19171:3095_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12675:4064_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12675:4064_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12675:4064_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12675:4064_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:4911:12851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14133:18565_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16809:18515_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13961:19185_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12833:20474_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12904:22417_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:2158:22785_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:14683:24003_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13524:26696_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:3271:33814_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:11217:34386_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:16653:38209_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8261:41339_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15113:44130_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9108:44334_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18827:46149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18827:46149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18827:46149_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18827:46149_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12048:46779_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12048:46779_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12048:46779_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12048:46779_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18164:48216_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5150:51976_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10512:58711_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20585:60791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20585:60791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20585:60791_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20585:60791_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7408:62965_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:8644:62952_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:15313:64086_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6158:65788_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5524:67462_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19873:75809_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10709:76981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10709:76981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10709:76981_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10709:76981_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:13704:77805_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6606:78973_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:9248:84572_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19528:85626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19528:85626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19528:85626_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:19528:85626_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18066:86305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18066:86305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18066:86305_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:18066:86305_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12276:90249_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12658:90630_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:6281:92597_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:1234:92764_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20622:95822_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20622:95822_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20622:95822_2:N:0:GCTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:20622:95822_2:N:0:GCTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:12230:96807_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:10451:97233_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:5318:97823_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2316:7966:99384_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8644:2317_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17378:2678_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13818:4644_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18620:4728_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12441:6066_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16994:7237_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5594:13274_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9662:14879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9662:14879_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9662:14879_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9662:14879_2:N:0:GATCAG/2/2' because it was < 2 characters long Processed 24000000 sequence pairs so far Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4327:18995_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14797:20990_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12917:23074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12917:23074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12917:23074_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:12917:23074_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2603:30274_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:16919:30942_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7702:32335_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18302:33782_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13833:34938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7449:38270_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9528:38349_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17474:37805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17474:37805_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17474:37805_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:17474:37805_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4900:43325_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14971:48569_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14971:48569_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14971:48569_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:14971:48569_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10257:49851_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19851:49754_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8848:50410_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:13473:51516_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:4899:56016_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5850:56603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5850:56603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5850:56603_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5850:56603_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:7599:61994_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10000:61980_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_1:N:0:GATCAA/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_2:N:0:GATCAA/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_1:N:0:GATCAA/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10586:62166_2:N:0:GATCAA/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2073:62259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2073:62259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2073:62259_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:2073:62259_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18573:63938_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:8612:67797_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3978:78385_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9583:79128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9583:79128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9583:79128_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:9583:79128_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:15974:80227_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10260:84437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10260:84437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10260:84437_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:10260:84437_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5643:86300_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5643:86300_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5643:86300_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:5643:86300_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:6138:87598_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:18715:89795_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:3437:98671_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2312:19524:100058_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:10699:4280_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8811:4956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8811:4956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8811:4956_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8811:4956_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17832:8070_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9712:9855_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6853:16894_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19428:27905_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11883:28979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11883:28979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11883:28979_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11883:28979_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9591:30850_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:9500:35147_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12996:35725_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_1:N:0:GTTCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_2:N:0:GTTCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_1:N:0:GTTCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3079:37059_2:N:0:GTTCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:21050:43215_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:5875:43986_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:5875:43986_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:5875:43986_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:5875:43986_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8328:48040_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16435:48812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16435:48812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16435:48812_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16435:48812_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3157:55116_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4655:59541_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:6286:60430_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11347:60457_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11347:60457_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11347:60457_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11347:60457_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11631:62998_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:16866:66273_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:13266:76716_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8261:78777_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:15675:79591_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:4052:81277_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:3125:89155_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12514:92446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12514:92446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12514:92446_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:12514:92446_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:8482:92935_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:11367:98847_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:17733:98876_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:7286:100530_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_2:N:0:GATCAG/2/2' because it was < 2 characters long Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_1:N:0:GATCAG/1/1' because length (1) <= # seed mismatches (0) Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_2:N:0:GATCAG/2/2' because length (1) <= # seed mismatches (0) Warning: skipping mate #1 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_1:N:0:GATCAG/1/1' because it was < 2 characters long Warning: skipping mate #2 of read 'D00743:144:CAAWNANXX:2:2314:19715:100550_2:N:0:GATCAG/2/2' because it was < 2 characters long 24477306 reads; of these: 24477306 (100.00%) were paired; of these: 15824512 (64.65%) aligned concordantly 0 times 3734641 (15.26%) aligned concordantly exactly 1 time 4918153 (20.09%) aligned concordantly >1 times 35.35% overall alignment rate 24477306 reads; of these: 24477306 (100.00%) were paired; of these: 15746314 (64.33%) aligned concordantly 0 times 3726928 (15.23%) aligned concordantly exactly 1 time 5004064 (20.44%) aligned concordantly >1 times 35.67% overall alignment rate Processed 24477306 sequences in total Successfully deleted the temporary files EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz_C_to_T.fastq and EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequence pairs analysed in total: 24477306 Number of paired-end alignments with a unique best hit: 10276418 Mapping efficiency: 42.0% Sequence pairs with no alignments under any condition: 11771224 Sequence pairs did not map uniquely: 2429664 Sequence pairs which were discarded because genomic sequence could not be extracted: 0 Number of sequence pairs with unique best (first) alignment came from the bowtie output: CT/GA/CT: 5086774 ((converted) top strand) GA/CT/CT: 0 (complementary to (converted) top strand) GA/CT/GA: 0 (complementary to (converted) bottom strand) CT/GA/GA: 5189644 ((converted) bottom strand) Number of alignments to (merely theoretical) complementary strands being rejected in total: 0 Final Cytosine Methylation Report ================================= Total number of C's analysed: 256660837 Total methylated C's in CpG context: 8579400 Total methylated C's in CHG context: 1100210 Total methylated C's in CHH context: 4713706 Total methylated C's in Unknown context: 34055 Total unmethylated C's in CpG context: 24327012 Total unmethylated C's in CHG context: 52134228 Total unmethylated C's in CHH context: 165806281 Total unmethylated C's in Unknown context: 540239 C methylated in CpG context: 26.1% C methylated in CHG context: 2.1% C methylated in CHH context: 2.8% C methylated in unknown context (CN or CHN): 5.9% Bismark completed in 0d 0h 43m 57s ==================== Bismark run complete ==================== Bowtie seems to be working fine (tested command '/gscratch/srlab/programs/bowtie2-2.3.5.1-linux-x86_64/bowtie2 --version' [2.3.5]) Output format is BAM (default) Alignments will be written out in BAM format. Samtools path provided as: '/gscratch/srlab/programs/samtools-1.9/samtools' Reference genome folder provided is /gscratch/srlab/strigg/data/Pgenr/OFS/ (absolute path is '/gscratch/srlab/strigg/data/Pgenr/OFS/)' FastQ format assumed (by default) Each Bowtie 2 instance is going to be run with 4 threads. Please monitor performance closely and tune down if needed! Input files to be analysed (in current folder '/gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3'): /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R1_001_val_1.fq.gz /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R2_001_val_2.fq.gz Library is assumed to be strand-specific (directional), alignments to strands complementary to the original top or bottom strands will be ignored (i.e. not performed!) Output will be written into the directory: /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3/ Setting parallelization to single-threaded (default) Current working directory is: /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3 Now reading in and storing sequence information of the genome specified in: /gscratch/srlab/strigg/data/Pgenr/OFS/ chr Scaffold_01 (89643857 bp) chr Scaffold_02 (69596280 bp) chr Scaffold_03 (57743597 bp) chr Scaffold_04 (65288255 bp) chr Scaffold_05 (67248332 bp) chr Scaffold_06 (61759565 bp) chr Scaffold_07 (43120122 bp) chr Scaffold_08 (61151155 bp) chr Scaffold_09 (38581958 bp) chr Scaffold_10 (53961475 bp) chr Scaffold_11 (51449921 bp) chr Scaffold_12 (50438331 bp) chr Scaffold_13 (44396874 bp) chr Scaffold_14 (45393038 bp) chr Scaffold_15 (47938513 bp) chr Scaffold_16 (31980953 bp) chr Scaffold_17 (34923512 bp) chr Scaffold_18 (27737463 bp) Single-core mode: setting pid to 1 Paired-end alignments will be performed ======================================= The provided filenames for paired-end alignments are /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R1_001_val_1.fq.gz and /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R2_001_val_2.fq.gz Input files are in FastQ format Writing a C -> T converted version of the input file EPI-167_S10_L002_R1_001_val_1.fq.gz to EPI-167_S10_L002_R1_001_val_1.fq.gz_C_to_T.fastq Created C -> T converted version of the FastQ file EPI-167_S10_L002_R1_001_val_1.fq.gz (24481250 sequences in total) Writing a G -> A converted version of the input file EPI-167_S10_L002_R2_001_val_2.fq.gz to EPI-167_S10_L002_R2_001_val_2.fq.gz_G_to_A.fastq Created G -> A converted version of the FastQ file EPI-167_S10_L002_R2_001_val_2.fq.gz (24481250 sequences in total) Input files are EPI-167_S10_L002_R1_001_val_1.fq.gz_C_to_T.fastq and EPI-167_S10_L002_R2_001_val_2.fq.gz_G_to_A.fastq (FastQ) Now running 2 instances of Bowtie 2 against the bisulfite genome of /gscratch/srlab/strigg/data/Pgenr/OFS/ with the specified options: -q --score-min L,0,-0.6 -p 4 --reorder --ignore-quals --no-mixed --no-discordant --dovetail --maxins 500 Now starting a Bowtie 2 paired-end alignment for CTread1GAread2CTgenome (reading in sequences from EPI-167_S10_L002_R1_001_val_1.fq.gz_C_to_T.fastq and EPI-167_S10_L002_R2_001_val_2.fq.gz_G_to_A.fastq, with the options: -q --score-min L,0,-0.6 -p 4 --reorder --ignore-quals --no-mixed --no-discordant --dovetail --maxins 500 --norc)) Found first alignment: D00743:144:CAAWNANXX:2:2207:1666:2232_1:N:0:GATCAG/1 77 * 0 0 * * 0 0 TTGAANTTGTTGATTTATATGGGGATATGAATAATAAGTTTAATATTTAAGATGGAGAAGAAATAAGTGTAGAATTTTGGATAAAGGATAATTAAGTTAAT BBBBB#BBFFFFFF>> Writing bisulfite mapping results to EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam <<< Reading in the sequence files /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R1_001_val_1.fq.gz and /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R2_001_val_2.fq.gz Processed 1000000 sequence pairs so far Processed 2000000 sequence pairs so far Processed 3000000 sequence pairs so far Processed 4000000 sequence pairs so far Processed 5000000 sequence pairs so far Processed 6000000 sequence pairs so far Processed 7000000 sequence pairs so far Processed 8000000 sequence pairs so far Processed 9000000 sequence pairs so far Processed 10000000 sequence pairs so far Processed 11000000 sequence pairs so far Processed 12000000 sequence pairs so far Processed 13000000 sequence pairs so far Processed 14000000 sequence pairs so far Processed 15000000 sequence pairs so far Processed 16000000 sequence pairs so far Processed 17000000 sequence pairs so far Processed 18000000 sequence pairs so far Processed 19000000 sequence pairs so far Processed 20000000 sequence pairs so far Processed 21000000 sequence pairs so far Processed 22000000 sequence pairs so far Processed 23000000 sequence pairs so far Processed 24000000 sequence pairs so far 24481250 reads; of these: 24481250 (100.00%) were paired; of these: 16118268 (65.84%) aligned concordantly 0 times 3811973 (15.57%) aligned concordantly exactly 1 time 4551009 (18.59%) aligned concordantly >1 times 34.16% overall alignment rate 24481250 reads; of these: 24481250 (100.00%) were paired; of these: 16050638 (65.56%) aligned concordantly 0 times 3801826 (15.53%) aligned concordantly exactly 1 time 4628786 (18.91%) aligned concordantly >1 times 34.44% overall alignment rate Processed 24481250 sequences in total Successfully deleted the temporary files EPI-167_S10_L002_R1_001_val_1.fq.gz_C_to_T.fastq and EPI-167_S10_L002_R2_001_val_2.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequence pairs analysed in total: 24481250 Number of paired-end alignments with a unique best hit: 10412084 Mapping efficiency: 42.5% Sequence pairs with no alignments under any condition: 12046556 Sequence pairs did not map uniquely: 2022610 Sequence pairs which were discarded because genomic sequence could not be extracted: 0 Number of sequence pairs with unique best (first) alignment came from the bowtie output: CT/GA/CT: 5155290 ((converted) top strand) GA/CT/CT: 0 (complementary to (converted) top strand) GA/CT/GA: 0 (complementary to (converted) bottom strand) CT/GA/GA: 5256794 ((converted) bottom strand) Number of alignments to (merely theoretical) complementary strands being rejected in total: 0 Final Cytosine Methylation Report ================================= Total number of C's analysed: 326275224 Total methylated C's in CpG context: 12338296 Total methylated C's in CHG context: 2041015 Total methylated C's in CHH context: 6293950 Total methylated C's in Unknown context: 65243 Total unmethylated C's in CpG context: 31811465 Total unmethylated C's in CHG context: 67746920 Total unmethylated C's in CHH context: 206043578 Total unmethylated C's in Unknown context: 702416 C methylated in CpG context: 27.9% C methylated in CHG context: 2.9% C methylated in CHH context: 3.0% C methylated in unknown context (CN or CHN): 8.5% Bismark completed in 0d 0h 50m 51s ==================== Bismark run complete ==================== *** Bismark methylation extractor version v0.19.0 *** Setting option '--no_overlap' since this is (normally) the right thing to do for paired-end data Summarising Bismark methylation extractor parameters: =============================================================== Bismark paired-end SAM format specified (default) Number of cores to be used: 14 Output will be written to the current directory ('/gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3') Summarising bedGraph parameters: =============================================================== Generating additional output in bedGraph and coverage format bedGraph format: coverage format: Using a cutoff of 1 read(s) to report cytosine positions Reporting and sorting cytosine methylation information in CpG context only (default) The bedGraph UNIX sort command will use the following memory setting: '75%'. Temporary directory used for sorting is the output directory Checking file >>EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam<< for signs of file truncation... Now testing Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam for positional sorting (which would be bad...) ...passed! Writing result file containing methylation information for C in CpG context from the original top strand to CpG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CpG context from the complementary to original top strand to CpG_CTOT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CpG context from the complementary to original bottom strand to CpG_CTOB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CpG context from the original bottom strand to CpG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the original top strand to CHG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the complementary to original top strand to CHG_CTOT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the complementary to original bottom strand to CHG_CTOB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the original bottom strand to CHG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the original top strand to CHH_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the complementary to original top strand to CHH_CTOT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the complementary to original bottom strand to CHH_CTOB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the original bottom strand to CHH_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bam skipping SAM header line: @HD VN:1.0 SO:unsorted skipping SAM header line: @SQ SN:Scaffold_01 LN:89643857 skipping SAM header line: @SQ SN:Scaffold_02 LN:69596280 skipping SAM header line: @SQ SN:Scaffold_03 LN:57743597 skipping SAM header line: @SQ SN:Scaffold_04 LN:65288255 skipping SAM header line: @SQ SN:Scaffold_05 LN:67248332 skipping SAM header line: @SQ SN:Scaffold_06 LN:61759565 skipping SAM header line: @SQ SN:Scaffold_07 LN:43120122 skipping SAM header line: @SQ SN:Scaffold_08 LN:61151155 skipping SAM header line: @SQ SN:Scaffold_09 LN:38581958 skipping SAM header line: @SQ SN:Scaffold_10 LN:53961475 skipping SAM header line: @SQ SN:Scaffold_11 LN:51449921 skipping SAM header line: @SQ SN:Scaffold_12 LN:50438331 skipping SAM header line: @SQ SN:Scaffold_13 LN:44396874 skipping SAM header line: @SQ SN:Scaffold_14 LN:45393038 skipping SAM header line: @SQ SN:Scaffold_15 LN:47938513 skipping SAM header line: @SQ SN:Scaffold_16 LN:31980953 skipping SAM header line: @SQ SN:Scaffold_17 LN:34923512 skipping SAM header line: @SQ SN:Scaffold_18 LN:27737463 skipping SAM header line: @PG ID:Bismark VN:v0.19.0 CL:"bismark --path_to_bowtie /gscratch/srlab/programs/bowtie2-2.3.5.1-linux-x86_64 --samtools_path /gscratch/srlab/programs/samtools-1.9/samtools -p 4 --score_min L,0,-0.6 --genome /gscratch/srlab/strigg/data/Pgenr/OFS/ -1 /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R1_001_val_1.20bp-trim.fq.gz -2 /gscratch/srlab/strigg/data/Pgenr/FASTQS/20bp_clip/EPI-167_S10_L002_R2_001_val_2.20bp-trim.fq.gz -o /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3" Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1000000 Processed lines: 1500000 Processed lines: 1500000 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Merging individual splitting reports into overall report: 'EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt' Merging from these individual files: EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.1 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.2 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.3 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.4 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.5 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.6 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.7 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.8 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.9 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.10 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.11 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.12 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.13 EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.14 Processed 10276418 lines in total Total number of methylation call strings processed: 20552836 Final Cytosine Methylation Report ================================= Total number of C's analysed: 181246589 Total methylated C's in CpG context: 5889995 Total methylated C's in CHG context: 712486 Total methylated C's in CHH context: 3177069 Total C to T conversions in CpG context: 17112146 Total C to T conversions in CHG context: 36479726 Total C to T conversions in CHH context: 117875167 C methylated in CpG context: 25.6% C methylated in CHG context: 1.9% C methylated in CHH context: 2.6% Merging individual M-bias reports into overall M-bias statistics from these 14 individual files: EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.1.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.2.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.3.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.4.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.5.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.6.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.7.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.8.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.9.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.10.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.11.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.12.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.13.mbias EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe_splitting_report.txt.14.mbias Determining maximum read lengths for M-Bias plots Maximum read length of Read 1: 81 Maximum read length of Read 2: 79 Perl module GD::Graph::lines is not installed, skipping drawing M-bias plots (only writing out M-bias plot table) Determining maximum read lengths for M-Bias plots Maximum read length of Read 1: 81 Maximum read length of Read 2: 79 Perl module GD::Graph::lines is not installed, skipping drawing M-bias plots (only writing out M-bias plot table) Deleting unused files ... CpG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt contains data -> kept CpG_CTOT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt was empty -> deleted CpG_CTOB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt was empty -> deleted CpG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt contains data -> kept CHG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt contains data -> kept CHG_CTOT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt was empty -> deleted CHG_CTOB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt was empty -> deleted CHG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt contains data -> kept CHH_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt contains data -> kept CHH_CTOT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt was empty -> deleted CHH_CTOB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt was empty -> deleted CHH_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt contains data -> kept Using these input files: CpG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt CpG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt CHG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt CHG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt CHH_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt CHH_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Summary of parameters for bismark2bedGraph conversion: ====================================================== bedGraph output: EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bedGraph.gz output directory: >< remove whitespaces: no CX context: no (CpG context only, default) No-header selected: no Sorting method: Unix sort-based (smaller memory footprint, but slower) Sort buffer size: 75% Coverage threshold: 1 ============================================================================= Methylation information will now be written into a bedGraph and coverage file ============================================================================= Using the following files as Input: /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3/CpG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3/CpG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt Writing bedGraph to file: EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bedGraph.gz Also writing out a coverage file including counts methylated and unmethylated residues to file: EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bismark.cov.gz The genome of interest was specified to contain gazillions of chromosomes or scaffolds. Merging all input files and sorting everything in memory instead of writing out individual chromosome files... Writing all merged methylation calls to temp file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bedGraph.gz.methylation_calls.merged Finished writing methylation calls from CpG_OT_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt to merged temp file Finished writing methylation calls from CpG_OB_EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.txt to merged temp file Sorting input file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bedGraph.gz.methylation_calls.merged by positions (using -S of 75%) Successfully deleted the temporary input file EPI-167_S10_L002_R1_001_val_1.20bp-trim_bismark_bt2_pe.bedGraph.gz.methylation_calls.merged Finished BedGraph conversion ... Checking file >>EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam<< for signs of file truncation... Now testing Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam for positional sorting (which would be bad...) ...passed! Writing result file containing methylation information for C in CpG context from the original top strand to CpG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CpG context from the complementary to original top strand to CpG_CTOT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CpG context from the complementary to original bottom strand to CpG_CTOB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CpG context from the original bottom strand to CpG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the original top strand to CHG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the complementary to original top strand to CHG_CTOT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the complementary to original bottom strand to CHG_CTOB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHG context from the original bottom strand to CHG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the original top strand to CHH_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the complementary to original top strand to CHH_CTOT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the complementary to original bottom strand to CHH_CTOB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing result file containing methylation information for C in CHH context from the original bottom strand to CHH_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Now reading in Bismark result file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bam Warning: unable to close filehandle IN properly. skipping SAM header line: @HD VN:1.0 SO:unsorted skipping SAM header line: @SQ SN:Scaffold_01 LN:89643857 skipping SAM header line: @SQ SN:Scaffold_02 LN:69596280 skipping SAM header line: @SQ SN:Scaffold_03 LN:57743597 skipping SAM header line: @SQ SN:Scaffold_04 LN:65288255 skipping SAM header line: @SQ SN:Scaffold_05 LN:67248332 skipping SAM header line: @SQ SN:Scaffold_06 LN:61759565 skipping SAM header line: @SQ SN:Scaffold_07 LN:43120122 skipping SAM header line: @SQ SN:Scaffold_08 LN:61151155 skipping SAM header line: @SQ SN:Scaffold_09 LN:38581958 skipping SAM header line: @SQ SN:Scaffold_10 LN:53961475 skipping SAM header line: @SQ SN:Scaffold_11 LN:51449921 skipping SAM header line: @SQ SN:Scaffold_12 LN:50438331 skipping SAM header line: @SQ SN:Scaffold_13 LN:44396874 skipping SAM header line: @SQ SN:Scaffold_14 LN:45393038 skipping SAM header line: @SQ SN:Scaffold_15 LN:47938513 skipping SAM header line: @SQ SN:Scaffold_16 LN:31980953 skipping SAM header line: @SQ SN:Scaffold_17 LN:34923512 skipping SAM header line: @SQ SN:Scaffold_18 LN:27737463 skipping SAM header line: @PG ID:Bismark VN:v0.19.0 CL:"bismark --path_to_bowtie /gscratch/srlab/programs/bowtie2-2.3.5.1-linux-x86_64 --samtools_path /gscratch/srlab/programs/samtools-1.9/samtools -p 4 --score_min L,0,-0.6 --genome /gscratch/srlab/strigg/data/Pgenr/OFS/ -1 /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R1_001_val_1.fq.gz -2 /gscratch/srlab/strigg/data/Pgenr/FASTQS/EPI-167_S10_L002_R2_001_val_2.fq.gz -o /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3" Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 500000 Processed lines: 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9000000 Processed lines: 9000000 Processed lines: 9000000 Processed lines: 9000000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 9500000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Processed lines: 10000000 Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Now waiting for all child processes to complete Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Finished processing child process. Exiting.. Merging individual splitting reports into overall report: 'EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt' Merging from these individual files: EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.1 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.2 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.3 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.4 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.5 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.6 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.7 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.8 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.9 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.10 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.11 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.12 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.13 EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.14 Processed 10412084 lines in total Total number of methylation call strings processed: 20824168 Final Cytosine Methylation Report ================================= Total number of C's analysed: 233408049 Total methylated C's in CpG context: 8936094 Total methylated C's in CHG context: 1489384 Total methylated C's in CHH context: 4505120 Total C to T conversions in CpG context: 22756308 Total C to T conversions in CHG context: 47957537 Total C to T conversions in CHH context: 147763606 C methylated in CpG context: 28.2% C methylated in CHG context: 3.0% C methylated in CHH context: 3.0% Merging individual M-bias reports into overall M-bias statistics from these 14 individual files: EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.1.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.2.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.3.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.4.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.5.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.6.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.7.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.8.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.9.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.10.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.11.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.12.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.13.mbias EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe_splitting_report.txt.14.mbias Determining maximum read lengths for M-Bias plots Maximum read length of Read 1: 101 Maximum read length of Read 2: 99 Perl module GD::Graph::lines is not installed, skipping drawing M-bias plots (only writing out M-bias plot table) Determining maximum read lengths for M-Bias plots Maximum read length of Read 1: 101 Maximum read length of Read 2: 99 Perl module GD::Graph::lines is not installed, skipping drawing M-bias plots (only writing out M-bias plot table) Deleting unused files ... CpG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt contains data -> kept CpG_CTOT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt was empty -> deleted CpG_CTOB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt was empty -> deleted CpG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt contains data -> kept CHG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt contains data -> kept CHG_CTOT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt was empty -> deleted CHG_CTOB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt was empty -> deleted CHG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt contains data -> kept CHH_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt contains data -> kept CHH_CTOT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt was empty -> deleted CHH_CTOB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt was empty -> deleted CHH_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt contains data -> kept Using these input files: CpG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt CpG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt CHG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt CHG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt CHH_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt CHH_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Summary of parameters for bismark2bedGraph conversion: ====================================================== bedGraph output: EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bedGraph.gz output directory: >< remove whitespaces: no CX context: no (CpG context only, default) No-header selected: no Sorting method: Unix sort-based (smaller memory footprint, but slower) Sort buffer size: 75% Coverage threshold: 1 ============================================================================= Methylation information will now be written into a bedGraph and coverage file ============================================================================= Using the following files as Input: /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3/CpG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt /gscratch/scrubbed/strigg/analyses/20200316/TG_EPI-Test3/CpG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt Writing bedGraph to file: EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bedGraph.gz Also writing out a coverage file including counts methylated and unmethylated residues to file: EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bismark.cov.gz The genome of interest was specified to contain gazillions of chromosomes or scaffolds. Merging all input files and sorting everything in memory instead of writing out individual chromosome files... Writing all merged methylation calls to temp file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bedGraph.gz.methylation_calls.merged Finished writing methylation calls from CpG_OT_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt to merged temp file Finished writing methylation calls from CpG_OB_EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.txt to merged temp file Sorting input file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bedGraph.gz.methylation_calls.merged by positions (using -S of 75%) Successfully deleted the temporary input file EPI-167_S10_L002_R1_001_val_1_bismark_bt2_pe.bedGraph.gz.methylation_calls.merged Finished BedGraph conversion ...