/var/spool/slurm/d/job1423601/slurm_script: line 24: fg: no job control Filtering allc files using 8 node(s). Thu Oct 24 14:06:46 2019 Splitting allc files for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:08:50 2019 Running rms tests for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:08:51 2019 Splitting allc files for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:08:51 2019 Ran 7765 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_6.tsv Ran 9674 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_0.tsv Running rms tests for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:09:17 2019 Splitting allc files for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:09:17 2019 Ran 10395 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_1.tsv Ran 10643 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_2.tsv Ran 9990 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_7.tsv Ran 8846 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_4.tsv Ran 11443 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_3.tsv Ran 15257 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_5.tsv Ran 3997 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_2.tsv Running rms tests for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:09:33 2019 Splitting allc files for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:09:33 2019 Ran 5725 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_5.tsv Ran 8847 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_0.tsv Ran 9168 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_3.tsv Ran 8495 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_6.tsv Ran 9529 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_4.tsv Ran 8183 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_7.tsv Ran 3209 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_3.tsv Ran 9288 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_0.tsv Ran 8211 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_1.tsv Running rms tests for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:09:57 2019 Splitting allc files for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:09:57 2019 Ran 4952 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_4.tsv Ran 4760 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_2.tsv Ran 8140 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_5.tsv Ran 5869 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_6.tsv Ran 5413 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_7.tsv Ran 2839 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_5.tsv Ran 7456 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_0.tsv Ran 7354 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_1.tsv Running rms tests for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:10:18 2019 Splitting allc files for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:10:18 2019 Ran 7676 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_2.tsv Ran 7910 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_4.tsv Ran 8678 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_3.tsv Ran 3743 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_7.tsv Ran 5851 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_6.tsv Ran 4842 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_0.tsv Ran 4372 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_1.tsv Ran 6158 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_2.tsv Running rms tests for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:10:35 2019 Splitting allc files for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:10:35 2019 Ran 5991 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_3.tsv Ran 4305 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_6.tsv Ran 7035 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_4.tsv Ran 5404 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_5.tsv Ran 5473 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_7.tsv Ran 4688 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_3.tsv Ran 6729 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_0.tsv Ran 5667 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_4.tsv Running rms tests for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:10:55 2019 Splitting allc files for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:10:55 2019 Ran 5403 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_6.tsv Ran 7528 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_5.tsv Ran 3638 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_2.tsv Ran 4654 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_0.tsv Ran 7264 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_1.tsv Ran 7590 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_7.tsv Ran 5649 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_1.tsv Running rms tests for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:11:12 2019 Splitting allc files for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:11:12 2019 Ran 4505 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_3.tsv Ran 2889 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_7.tsv Ran 3524 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_5.tsv Ran 5404 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_4.tsv Ran 5220 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_6.tsv Ran 4078 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_2.tsv Ran 6555 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_1.tsv Ran 6791 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_0.tsv Ran 4916 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_4.tsv Running rms tests for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:11:32 2019 Splitting allc files for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:11:32 2019 Ran 3104 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_1.tsv Ran 7793 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_3.tsv Ran 7874 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_5.tsv Ran 4418 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_2.tsv Ran 3224 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_0.tsv Ran 2032 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_3.tsv Ran 7548 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_6.tsv Ran 2721 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_1.tsv Running rms tests for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:11:45 2019 Splitting allc files for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:11:45 2019 Ran 2414 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_7.tsv Ran 5323 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_7.tsv Ran 2607 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_2.tsv Ran 4732 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_6.tsv Ran 4868 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_4.tsv Ran 5182 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_0.tsv Ran 8238 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_5.tsv Ran 5672 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_2.tsv Running rms tests for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:12:02 2019 Splitting allc files for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:12:02 2019 Ran 6874 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_1.tsv Ran 6868 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_3.tsv Ran 5702 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_5.tsv Ran 2200 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_1.tsv Ran 6983 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_4.tsv Ran 4423 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_6.tsv Ran 3992 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_7.tsv Running rms tests for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:12:13 2019 Splitting allc files for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:12:13 2019 Ran 3558 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_3.tsv Ran 5708 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_0.tsv Ran 3936 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_7.tsv Ran 4001 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_5.tsv Ran 6802 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_2.tsv Ran 6673 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_6.tsv Ran 4557 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_0.tsv Ran 4027 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_2.tsv Ran 4406 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_5.tsv Running rms tests for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:12:29 2019 Splitting allc files for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:12:29 2019 Ran 5074 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_4.tsv Ran 5548 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_1.tsv Ran 7573 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_3.tsv Ran 3528 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_0.tsv Ran 6096 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_6.tsv Ran 3829 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_2.tsv Ran 4570 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_1.tsv Ran 4146 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_3.tsv Ran 5688 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_7.tsv Running rms tests for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:12:43 2019 Splitting allc files for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:12:43 2019 Ran 5352 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_4.tsv Ran 4563 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_5.tsv Ran 5448 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_6.tsv Ran 4009 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_7.tsv Ran 5512 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_0.tsv Ran 6759 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_2.tsv Ran 6147 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_3.tsv Running rms tests for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:13:04 2019 Splitting allc files for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:13:04 2019 Ran 2906 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_4.tsv Ran 6436 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_5.tsv Ran 3911 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_7.tsv Ran 6782 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_4.tsv Ran 8922 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_6.tsv Ran 2920 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_0.tsv Ran 2479 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_3.tsv Ran 5101 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_1.tsv Running rms tests for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:13:19 2019 Splitting allc files for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:13:19 2019 Ran 4295 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_2.tsv Ran 3834 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_5.tsv Ran 6276 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_1.tsv Ran 5516 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_4.tsv Ran 2730 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_7.tsv Ran 3948 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_6.tsv Ran 3619 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_1.tsv Ran 3503 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_2.tsv Running rms tests for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:13:30 2019 Splitting allc files for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:13:30 2019 Ran 3107 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_7.tsv Ran 3233 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_6.tsv Ran 3151 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_3.tsv Ran 664 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_0.tsv Ran 4462 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_4.tsv Ran 4807 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_5.tsv Ran 2827 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_2.tsv Ran 4447 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_0.tsv Ran 3571 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_1.tsv Running rms tests for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:13:41 2019 Ran 2759 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_7.tsv Ran 3280 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_3.tsv Ran 2705 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_5.tsv Ran 2248 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_4.tsv Ran 2787 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_1.tsv Ran 5441 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_6.tsv Ran 1681 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_5.tsv Ran 2691 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_3.tsv Ran 3127 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_0.tsv Ran 6280 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_4.tsv Ran 2042 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_7.tsv Ran 2317 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_6.tsv Ran 2004 root mean square tests. Results in amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_2.tsv Merging sorted amb_AllTimes_DMR250bp_MCmax10_cov5x_rms_results.tsv files. Thu Oct 24 14:14:00 2019 Begin FDR Correction Thu Oct 24 14:15:18 2019 m0 estimate for iteration 0: 770689 Histogram FDR correction did not converge. Using the smallest p-value 0.0003333333333333333 as cutoff. Calculating Residual Cutoff Thu Oct 24 14:15:20 2019 Begin Defining Windows Thu Oct 24 14:15:25 2019 Adding Methylation Levels Thu Oct 24 14:15:35 2019 Done Thu Oct 24 14:15:42 2019 Filtering allc files using 8 node(s). Thu Oct 24 14:15:43 2019 Splitting allc files for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:17:39 2019 Running rms tests for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:17:40 2019 Splitting allc files for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:17:40 2019 Ran 10893 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_3.tsv Ran 10562 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_0.tsv Ran 11284 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_2.tsv Ran 10380 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_7.tsv Running rms tests for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:18:07 2019 Splitting allc files for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:18:07 2019 Ran 12741 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_5.tsv Ran 12561 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_6.tsv Ran 12061 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_1.tsv Ran 11218 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_4.tsv Ran 7499 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_2.tsv Ran 7907 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_4.tsv Ran 8705 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_0.tsv Running rms tests for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:18:27 2019 Splitting allc files for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:18:27 2019 Ran 8269 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_5.tsv Ran 8533 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_6.tsv Ran 9464 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_3.tsv Ran 7881 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_7.tsv Ran 6354 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_0.tsv Ran 7479 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_1.tsv Ran 5776 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_6.tsv Ran 6056 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_4.tsv Running rms tests for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:18:47 2019 Splitting allc files for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:18:47 2019 Ran 7986 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_2.tsv Ran 8054 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_5.tsv Ran 6227 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_3.tsv Ran 6435 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_7.tsv Ran 6541 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_0.tsv Ran 6213 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_5.tsv Ran 6652 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_2.tsv Ran 7345 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_4.tsv Running rms tests for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:19:04 2019 Splitting allc files for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:19:04 2019 Ran 7626 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_3.tsv Ran 7846 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_1.tsv Ran 5221 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_2.tsv Ran 7016 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_6.tsv Ran 4790 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_0.tsv Ran 5238 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_3.tsv Ran 8301 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_1.tsv Ran 7376 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_7.tsv Running rms tests for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:19:20 2019 Splitting allc files for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:19:20 2019 Ran 6881 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_1.tsv Ran 5932 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_4.tsv Ran 6327 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_5.tsv Ran 6328 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_7.tsv Ran 6489 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_6.tsv Ran 5890 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_2.tsv Ran 6540 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_4.tsv Ran 5750 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_0.tsv Running rms tests for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:19:36 2019 Splitting allc files for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:19:36 2019 Ran 6402 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_3.tsv Ran 5786 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_6.tsv Ran 6446 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_5.tsv Ran 6614 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_7.tsv Ran 3975 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_2.tsv Ran 4326 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_3.tsv Ran 5495 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_0.tsv Ran 5453 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_1.tsv Running rms tests for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:19:50 2019 Splitting allc files for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:19:50 2019 Ran 4926 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_4.tsv Ran 4903 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_5.tsv Ran 4311 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_7.tsv Ran 5322 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_6.tsv Ran 6912 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_2.tsv Ran 5962 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_1.tsv Ran 6355 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_4.tsv Running rms tests for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:20:07 2019 Splitting allc files for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:20:07 2019 Ran 8540 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_0.tsv Ran 7154 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_5.tsv Ran 7265 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_3.tsv Ran 6755 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_6.tsv Ran 6543 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_1.tsv Ran 3878 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_5.tsv Ran 3839 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_2.tsv Ran 4711 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_0.tsv Ran 4096 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_3.tsv Ran 6238 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_7.tsv Ran 4513 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_4.tsv Running rms tests for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:20:21 2019 Splitting allc files for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:20:21 2019 Ran 4007 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_1.tsv Ran 4231 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_6.tsv Ran 4211 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_7.tsv Ran 5260 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_3.tsv Ran 5812 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_1.tsv Ran 6162 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_0.tsv Running rms tests for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:20:35 2019 Splitting allc files for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:20:35 2019 Ran 6032 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_2.tsv Ran 6138 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_5.tsv Ran 7536 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_4.tsv Ran 6554 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_6.tsv Ran 4007 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_1.tsv Ran 6164 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_7.tsv Ran 4869 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_3.tsv Ran 5128 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_2.tsv Running rms tests for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:20:46 2019 Splitting allc files for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:20:46 2019 Ran 5803 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_0.tsv Ran 4882 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_6.tsv Ran 5564 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_5.tsv Ran 4518 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_7.tsv Ran 4837 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_2.tsv Ran 6097 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_1.tsv Ran 6081 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_0.tsv Ran 6053 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_3.tsv Running rms tests for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:21:03 2019 Splitting allc files for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:21:03 2019 Ran 6353 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_5.tsv Ran 5731 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_4.tsv Ran 5881 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_6.tsv Ran 6054 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_7.tsv Ran 4469 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_2.tsv Ran 4135 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_1.tsv Ran 4356 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_0.tsv Running rms tests for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:21:16 2019 Splitting allc files for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:21:16 2019 Ran 4941 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_5.tsv Ran 5261 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_3.tsv Ran 4300 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_6.tsv Ran 6846 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_4.tsv Ran 4314 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_7.tsv Ran 4717 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_4.tsv Ran 5950 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_2.tsv Ran 6718 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_0.tsv Ran 6456 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_3.tsv Running rms tests for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:21:35 2019 Splitting allc files for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:21:35 2019 Ran 7309 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_5.tsv Ran 6601 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_7.tsv Ran 7304 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_1.tsv Ran 7646 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_6.tsv Ran 7528 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_4.tsv Ran 4887 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_1.tsv Ran 3993 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_2.tsv Ran 3759 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_0.tsv Running rms tests for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:21:48 2019 Splitting allc files for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:21:48 2019 Ran 4259 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_4.tsv Ran 3966 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_3.tsv Ran 4043 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_6.tsv Ran 4136 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_7.tsv Ran 4765 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_5.tsv Ran 2596 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_1.tsv Ran 3259 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_3.tsv Running rms tests for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:21:56 2019 Splitting allc files for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:21:56 2019 Ran 3251 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_7.tsv Ran 3672 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_5.tsv Ran 3101 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_6.tsv Ran 4676 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_4.tsv Ran 3775 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_2.tsv Ran 4587 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_0.tsv Ran 3942 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_0.tsv Running rms tests for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:22:07 2019 Ran 3522 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_5.tsv Ran 2896 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_7.tsv Ran 5003 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_1.tsv Ran 4437 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_2.tsv Ran 4542 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_6.tsv Ran 3743 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_4.tsv Ran 5736 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_3.tsv Ran 2681 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_0.tsv Ran 2995 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_1.tsv Ran 2345 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_4.tsv Ran 2708 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_3.tsv Ran 2254 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_6.tsv Ran 2114 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_7.tsv Ran 2704 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_5.tsv Ran 3032 root mean square tests. Results in day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_2.tsv Merging sorted day10_AllpH_DMR250bp_MCmax10_cov5x_rms_results.tsv files. Thu Oct 24 14:22:22 2019 Begin FDR Correction Thu Oct 24 14:23:32 2019 m0 estimate for iteration 0: 841542 Histogram FDR correction did not converge. Using the smallest p-value 0.0003333333333333333 as cutoff. Calculating Residual Cutoff Thu Oct 24 14:23:33 2019 Begin Defining Windows Thu Oct 24 14:23:39 2019 Adding Methylation Levels Thu Oct 24 14:23:48 2019 Done Thu Oct 24 14:23:56 2019 /var/spool/slurm/d/job1423601/slurm_script: line 82: fg: no job control Filtering allc files using 8 node(s). Thu Oct 24 14:23:57 2019 Splitting allc files for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:25:27 2019 Running rms tests for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:25:28 2019 Splitting allc files for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:25:28 2019 Ran 5669 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_2.tsv Ran 5853 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_1.tsv Ran 5955 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_0.tsv Ran 5847 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_5.tsv Running rms tests for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:25:41 2019 Splitting allc files for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:25:41 2019 Ran 5090 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_7.tsv Ran 5210 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_4.tsv Ran 6241 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_3.tsv Ran 6422 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_6.tsv Ran 4130 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_2.tsv Ran 4461 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_4.tsv Ran 4461 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_3.tsv Running rms tests for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:25:51 2019 Splitting allc files for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:25:51 2019 Ran 4049 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_6.tsv Ran 4491 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_0.tsv Ran 4180 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_5.tsv Ran 4311 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_7.tsv Ran 3444 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_0.tsv Ran 3701 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_2.tsv Ran 4211 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_1.tsv Ran 2923 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_6.tsv Ran 3715 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_5.tsv Running rms tests for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:26:00 2019 Splitting allc files for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:26:00 2019 Ran 3312 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_4.tsv Ran 3155 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_3.tsv Ran 3539 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_2.tsv Ran 3315 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_0.tsv Ran 3702 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_4.tsv Ran 3490 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_7.tsv Ran 3844 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_3.tsv Ran 3882 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_1.tsv Ran 3175 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_5.tsv Running rms tests for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:26:10 2019 Splitting allc files for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:26:10 2019 Ran 3156 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_6.tsv Ran 3125 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_2.tsv Ran 3344 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_4.tsv Ran 2713 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_0.tsv Ran 2818 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_3.tsv Running rms tests for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:26:17 2019 Splitting allc files for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:26:17 2019 Ran 3349 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_7.tsv Ran 3270 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_1.tsv Ran 2936 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_7.tsv Ran 3275 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_6.tsv Ran 2873 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_0.tsv Ran 3431 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_2.tsv Ran 2906 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_5.tsv Ran 2983 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_3.tsv Running rms tests for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:26:26 2019 Splitting allc files for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:26:26 2019 Ran 3019 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_4.tsv Ran 3282 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_5.tsv Ran 3265 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_6.tsv Ran 3378 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_7.tsv Ran 2481 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_0.tsv Ran 2177 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_2.tsv Ran 3125 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_1.tsv Ran 2342 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_3.tsv Running rms tests for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:26:35 2019 Splitting allc files for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:26:35 2019 Ran 2512 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_4.tsv Ran 1891 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_7.tsv Ran 2747 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_6.tsv Ran 2684 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_5.tsv Ran 3371 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_3.tsv Ran 2979 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_1.tsv Ran 3775 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_2.tsv Ran 3642 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_5.tsv Ran 3412 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_4.tsv Running rms tests for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:26:45 2019 Splitting allc files for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:26:45 2019 Ran 4169 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_0.tsv Ran 3274 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_6.tsv Ran 1819 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_2.tsv Ran 2364 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_0.tsv Ran 2371 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_3.tsv Ran 3519 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_7.tsv Ran 1899 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_5.tsv Running rms tests for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:26:54 2019 Splitting allc files for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:26:54 2019 Ran 2413 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_4.tsv Ran 2294 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_6.tsv Ran 2165 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_7.tsv Ran 2150 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_1.tsv Ran 3205 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_1.tsv Ran 3117 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_0.tsv Ran 3202 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_2.tsv Ran 2703 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_3.tsv Running rms tests for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:27:03 2019 Splitting allc files for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:27:03 2019 Ran 3463 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_5.tsv Ran 3538 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_4.tsv Ran 1549 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_1.tsv Ran 3412 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_6.tsv Ran 2961 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_7.tsv Ran 2831 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_0.tsv Ran 2847 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_2.tsv Ran 2277 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_3.tsv Running rms tests for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:27:10 2019 Splitting allc files for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:27:10 2019 Ran 2429 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_5.tsv Ran 2969 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_6.tsv Ran 2532 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_7.tsv Ran 4230 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_1.tsv Ran 2825 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_0.tsv Ran 3133 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_1.tsv Ran 2521 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_2.tsv Running rms tests for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:27:19 2019 Splitting allc files for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:27:19 2019 Ran 2799 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_4.tsv Ran 3023 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_3.tsv Ran 3176 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_5.tsv Ran 3215 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_6.tsv Ran 2660 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_7.tsv Ran 2527 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_0.tsv Ran 2449 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_1.tsv Ran 2651 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_3.tsv Ran 2782 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_2.tsv Ran 2232 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_5.tsv Running rms tests for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:27:27 2019 Splitting allc files for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:27:27 2019 Ran 2828 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_4.tsv Ran 1936 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_6.tsv Ran 2150 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_7.tsv Ran 3389 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_0.tsv Ran 3092 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_2.tsv Ran 3435 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_3.tsv Running rms tests for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:27:39 2019 Splitting allc files for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:27:39 2019 Ran 3930 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_5.tsv Ran 3036 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_7.tsv Ran 4107 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_6.tsv Ran 4202 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_4.tsv Ran 2562 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_1.tsv Ran 2010 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_0.tsv Ran 2016 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_2.tsv Ran 2014 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_4.tsv Ran 2459 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_3.tsv Running rms tests for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:27:50 2019 Splitting allc files for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:27:50 2019 Ran 2521 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_5.tsv Ran 1821 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_6.tsv Ran 3690 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_1.tsv Ran 1455 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_1.tsv Ran 1980 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_7.tsv Ran 1945 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_3.tsv Ran 1680 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_2.tsv Ran 1530 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_6.tsv Ran 1976 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_5.tsv Running rms tests for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:27:57 2019 Splitting allc files for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:27:57 2019 Ran 2484 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_4.tsv Ran 1555 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_7.tsv Ran 2262 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_0.tsv Ran 2558 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_3.tsv Ran 2228 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_2.tsv Ran 2518 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_1.tsv Running rms tests for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:28:04 2019 Ran 2296 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_4.tsv Ran 2383 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_4.tsv Ran 1567 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_7.tsv Ran 2127 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_5.tsv Ran 1274 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_0.tsv Ran 1450 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_1.tsv Ran 967 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_4.tsv Ran 2327 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_6.tsv Ran 1299 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_3.tsv Ran 1260 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_6.tsv Ran 1145 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_7.tsv Ran 1410 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_5.tsv Ran 1848 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_0.tsv Ran 1804 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_2.tsv Ran 2805 root mean square tests. Results in day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_1.tsv Merging sorted day135_AllpH_DMR250bp_MCmax10_cov5x_rms_results.tsv files. Thu Oct 24 14:28:39 2019 Begin FDR Correction Thu Oct 24 14:29:14 2019 m0 estimate for iteration 0: 429065 Histogram FDR correction did not converge. Using the smallest p-value 0.0003333333333333333 as cutoff. Calculating Residual Cutoff Thu Oct 24 14:29:16 2019 Begin Defining Windows Thu Oct 24 14:29:21 2019 Adding Methylation Levels Thu Oct 24 14:29:25 2019 Done Thu Oct 24 14:29:28 2019 /var/spool/slurm/d/job1423601/slurm_script: line 108: fg: no job control Filtering allc files using 8 node(s). Thu Oct 24 14:29:29 2019 Splitting allc files for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:32:00 2019 Running rms tests for chromosome PGA_scaffold1__77_contigs__length_89643857 Thu Oct 24 14:32:01 2019 Splitting allc files for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:32:01 2019 Ran 7591 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_6.tsv Running rms tests for chromosome PGA_scaffold2__36_contigs__length_69596280 Thu Oct 24 14:32:32 2019 Splitting allc files for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:32:32 2019 Ran 9860 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_0.tsv Ran 9837 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_7.tsv Ran 10995 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_1.tsv Ran 10985 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_2.tsv Ran 9227 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_4.tsv Ran 11681 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_3.tsv Ran 3987 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_2.tsv Ran 15630 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold1__77_contigs__length_89643857_chunk_5.tsv Running rms tests for chromosome PGA_scaffold3__111_contigs__length_57743597 Thu Oct 24 14:32:53 2019 Splitting allc files for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:32:53 2019 Ran 8669 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_0.tsv Ran 6073 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_5.tsv Ran 9406 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_3.tsv Ran 8973 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_6.tsv Ran 9761 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_4.tsv Ran 8280 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_7.tsv Ran 3431 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_3.tsv Ran 9290 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_0.tsv Ran 4819 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_2.tsv Running rms tests for chromosome PGA_scaffold4__129_contigs__length_65288255 Thu Oct 24 14:33:22 2019 Splitting allc files for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:33:22 2019 Ran 8383 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_1.tsv Ran 4927 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_4.tsv Ran 8134 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_5.tsv Ran 5301 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_7.tsv Ran 5714 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold3__111_contigs__length_57743597_chunk_6.tsv Ran 7189 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_0.tsv Ran 2797 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_5.tsv Ran 7269 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_1.tsv Ran 7562 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_2.tsv Running rms tests for chromosome PGA_scaffold5__109_contigs__length_67248332 Thu Oct 24 14:33:48 2019 Splitting allc files for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:33:48 2019 Ran 7691 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_4.tsv Ran 8605 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_3.tsv Ran 3764 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_7.tsv Ran 5729 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold4__129_contigs__length_65288255_chunk_6.tsv Ran 4717 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_0.tsv Ran 4289 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_1.tsv Ran 6090 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_2.tsv Running rms tests for chromosome PGA_scaffold6__104_contigs__length_61759565 Thu Oct 24 14:34:07 2019 Splitting allc files for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:34:07 2019 Ran 5869 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_3.tsv Ran 5528 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_5.tsv Ran 7092 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_4.tsv Ran 4667 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_6.tsv Ran 5676 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold5__109_contigs__length_67248332_chunk_7.tsv Ran 6587 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_0.tsv Ran 4928 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_3.tsv Ran 5201 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_6.tsv Ran 5654 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_4.tsv Running rms tests for chromosome PGA_scaffold7__69_contigs__length_43120122 Thu Oct 24 14:34:34 2019 Splitting allc files for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:34:34 2019 Ran 7431 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_5.tsv Ran 3076 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_1.tsv Ran 3597 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_2.tsv Ran 4630 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_0.tsv Ran 5609 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_1.tsv Ran 7369 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_7.tsv Ran 4370 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_3.tsv Running rms tests for chromosome PGA_scaffold8__63_contigs__length_61151155 Thu Oct 24 14:34:54 2019 Splitting allc files for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:34:54 2019 Ran 3510 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_5.tsv Ran 2902 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_7.tsv Ran 5376 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_4.tsv Ran 5306 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold7__69_contigs__length_43120122_chunk_6.tsv Ran 4004 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_2.tsv Ran 4407 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold6__104_contigs__length_61759565_chunk_2.tsv Ran 6581 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_1.tsv Running rms tests for chromosome PGA_scaffold9__45_contigs__length_38581958 Thu Oct 24 14:35:15 2019 Splitting allc files for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:35:15 2019 Ran 6985 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_0.tsv Ran 4846 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_4.tsv Ran 7820 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_3.tsv Ran 3220 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_0.tsv Ran 7173 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold2__36_contigs__length_69596280_chunk_1.tsv Ran 1999 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_3.tsv Ran 8046 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_5.tsv Ran 5244 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_7.tsv Ran 2687 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_1.tsv Ran 7508 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold8__63_contigs__length_61151155_chunk_6.tsv Running rms tests for chromosome PGA_scaffold10__49_contigs__length_53961475 Thu Oct 24 14:35:34 2019 Splitting allc files for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:35:34 2019 Ran 2562 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_2.tsv Ran 2462 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_7.tsv Ran 4864 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_6.tsv Ran 4925 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_4.tsv Ran 5281 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_0.tsv Ran 8210 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold9__45_contigs__length_38581958_chunk_5.tsv Ran 5953 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_2.tsv Running rms tests for chromosome PGA_scaffold11__79_contigs__length_51449921 Thu Oct 24 14:35:53 2019 Splitting allc files for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:35:53 2019 Ran 7077 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_1.tsv Ran 6942 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_3.tsv Ran 2198 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_1.tsv Ran 7107 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_4.tsv Ran 5665 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_5.tsv Ran 4400 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_6.tsv Ran 3916 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold10__49_contigs__length_53961475_chunk_7.tsv Running rms tests for chromosome PGA_scaffold12__71_contigs__length_50438331 Thu Oct 24 14:36:06 2019 Splitting allc files for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:36:06 2019 Ran 5576 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_0.tsv Ran 3916 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_5.tsv Ran 6762 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_2.tsv Ran 3576 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_3.tsv Ran 3958 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_7.tsv Ran 6740 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_6.tsv Ran 4525 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_0.tsv Ran 3954 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_2.tsv Ran 4565 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_5.tsv Running rms tests for chromosome PGA_scaffold13__52_contigs__length_44396874 Thu Oct 24 14:36:26 2019 Splitting allc files for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:36:26 2019 Ran 5515 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_1.tsv Ran 5184 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_4.tsv Ran 7461 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_3.tsv Ran 3884 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_2.tsv Ran 3587 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_0.tsv Ran 6088 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_6.tsv Ran 4385 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_1.tsv Ran 5750 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold12__71_contigs__length_50438331_chunk_7.tsv Ran 3917 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_3.tsv Running rms tests for chromosome PGA_scaffold14__91_contigs__length_45393038 Thu Oct 24 14:36:41 2019 Splitting allc files for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:36:41 2019 Ran 5581 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_4.tsv Ran 4629 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_5.tsv Ran 4062 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_7.tsv Ran 5542 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold13__52_contigs__length_44396874_chunk_6.tsv Ran 5560 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_0.tsv Ran 6590 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_2.tsv Running rms tests for chromosome PGA_scaffold15__101_contigs__length_47938513 Thu Oct 24 14:37:06 2019 Splitting allc files for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:37:06 2019 Ran 6219 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_3.tsv Ran 3752 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_7.tsv Ran 6246 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_5.tsv Ran 8911 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_6.tsv Ran 2921 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_0.tsv Ran 6888 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_4.tsv Ran 2455 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_3.tsv Ran 6127 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold14__91_contigs__length_45393038_chunk_1.tsv Ran 5017 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_1.tsv Running rms tests for chromosome PGA_scaffold16__33_contigs__length_31980953 Thu Oct 24 14:37:27 2019 Splitting allc files for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:37:27 2019 Ran 2725 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_7.tsv Ran 3865 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_5.tsv Ran 4210 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_2.tsv Ran 2941 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold11__79_contigs__length_51449921_chunk_4.tsv Ran 3928 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_6.tsv Ran 5501 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold15__101_contigs__length_47938513_chunk_4.tsv Ran 3415 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_2.tsv Ran 3687 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_1.tsv Running rms tests for chromosome PGA_scaffold17__51_contigs__length_34923512 Thu Oct 24 14:37:43 2019 Splitting allc files for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:37:43 2019 Ran 3118 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_7.tsv Ran 4590 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_4.tsv Ran 3130 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_6.tsv Ran 3053 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_3.tsv Ran 4731 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_5.tsv Ran 3461 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_1.tsv Ran 2770 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_2.tsv Ran 4370 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_0.tsv Ran 3131 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_3.tsv Running rms tests for chromosome PGA_scaffold18__69_contigs__length_27737463 Thu Oct 24 14:37:57 2019 Ran 654 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold16__33_contigs__length_31980953_chunk_0.tsv Ran 2587 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_5.tsv Ran 2659 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_7.tsv Ran 5450 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_6.tsv Ran 2198 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_4.tsv Ran 6248 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold17__51_contigs__length_34923512_chunk_4.tsv Ran 2855 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_1.tsv Ran 3209 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_0.tsv Ran 2714 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_3.tsv Ran 1729 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_5.tsv Ran 2237 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_6.tsv Ran 2058 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_7.tsv Ran 2103 root mean square tests. Results in day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results_for_PGA_scaffold18__69_contigs__length_27737463_chunk_2.tsv Merging sorted day145_AllpH_DMR250bp_MCmax10_cov5x_rms_results.tsv files. Thu Oct 24 14:38:29 2019 Begin FDR Correction Thu Oct 24 14:40:05 2019 m0 estimate for iteration 0: 772286 Histogram FDR correction did not converge. Using the smallest p-value 0.0003333333333333333 as cutoff. Calculating Residual Cutoff Thu Oct 24 14:40:08 2019 Begin Defining Windows Thu Oct 24 14:40:12 2019 Adding Methylation Levels Thu Oct 24 14:40:26 2019 Done Thu Oct 24 14:40:32 2019