EPI-226_S34_L004_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 4194258 lines in total Total number of methylation call strings processed: 8388516 Final Cytosine Methylation Report ================================= Total number of C's analysed: 93695995 Total methylated C's in CpG context: 3724305 Total methylated C's in CHG context: 621189 Total methylated C's in CHH context: 4477609 Total C to T conversions in CpG context: 8646879 Total C to T conversions in CHG context: 18759074 Total C to T conversions in CHH context: 57466939 C methylated in CpG context: 30.1% C methylated in CHG context: 3.2% C methylated in CHH context: 7.2%