Total number of alignments analysed in /gscratch/scrubbed/strigg/analyses/20190806_v074/EPI-221_S33_L004_R1_001_val_1_bismark_bt2_pe.bam:	7892255
Total number duplicated alignments removed:	2308469 (29.25%)
Duplicated alignments were found at:	1344013 different position(s)

Total count of deduplicated leftover sequences: 5583786 (70.75% of total)