Total number of alignments analysed in /gscratch/scrubbed/strigg/analyses/20190806_v074/EPI-214_S30_L004_R1_001_val_1_bismark_bt2_pe.bam:	13828640
Total number duplicated alignments removed:	3695743 (26.73%)
Duplicated alignments were found at:	1989541 different position(s)

Total count of deduplicated leftover sequences: 10132897 (73.27% of total)