EPI-206_S27_L004_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 7495147 lines in total Total number of methylation call strings processed: 14990294 Final Cytosine Methylation Report ================================= Total number of C's analysed: 155778901 Total methylated C's in CpG context: 6079013 Total methylated C's in CHG context: 928079 Total methylated C's in CHH context: 4316185 Total C to T conversions in CpG context: 15472822 Total C to T conversions in CHG context: 32432818 Total C to T conversions in CHH context: 96549984 C methylated in CpG context: 28.2% C methylated in CHG context: 2.8% C methylated in CHH context: 4.3%