Tank3-15-16_trim_R1_001_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 29241795 lines in total Total number of methylation call strings processed: 58483590 Final Cytosine Methylation Report ================================= Total number of C's analysed: 806340824 Total methylated C's in CpG context: 17588774 Total methylated C's in CHG context: 2609542 Total methylated C's in CHH context: 10514491 Total C to T conversions in CpG context: 78701763 Total C to T conversions in CHG context: 141620087 Total C to T conversions in CHH context: 555306167 C methylated in CpG context: 18.3% C methylated in CHG context: 1.8% C methylated in CHH context: 1.9%