File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated CpHs	Unmethylated CpHs	Methylated CHHs	Unmethylated CHHs
Tank2-025-026_R1_001_bismark_bt2_pe.bam	66223383	44222014	16030925	5913967	56477	4089205	40132809	1485241266	34942833	140499026	9334228	254525528	38423399	1007516252
Tank2-025-026_trim_R1_001_bismark_bt2_pe.bam	66223383	42892839	15693250	7601542	35752	3932820	38960019	1060006273	23298832	102397659	3506195	184778081	14286000	731739506
Tank3-15-16_R1_001_bismark_bt2_pe.bam	49500297	32660140	12520575	4276572	43010	2547287	30112853	1140211631	26570633	108973925	7014866	196755646	28533548	772363013
Tank3-15-16_trim_R1_001_bismark_bt2_pe.bam	49500297	31686658	12290056	5496651	26932	2444863	29241795	806340824	17588774	78701763	2609542	141620087	10514491	555306167