CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 60361 549798 9.89 610159 2 172303 691234 19.95 863537 3 137282 459623 23.00 596905 4 128996 655709 16.44 784705 5 144223 624665 18.76 768888 6 155577 724891 17.67 880468 7 151449 635486 19.25 786935 8 140574 604277 18.87 744851 9 132369 603275 17.99 735644 10 132244 589954 18.31 722198 11 127618 603689 17.45 731307 12 129368 591656 17.94 721024 13 127997 586278 17.92 714275 14 129030 590399 17.94 719429 15 128332 591085 17.84 719417 16 128968 597238 17.76 726206 17 131040 599591 17.94 730631 18 131767 608580 17.80 740347 19 133027 603180 18.07 736207 20 133791 606535 18.07 740326 21 133474 600961 18.17 734435 22 132223 600249 18.05 732472 23 131259 595027 18.07 726286 24 132948 600886 18.12 733834 25 132261 597033 18.14 729294 26 132635 598621 18.14 731256 27 132785 603634 18.03 736419 28 132088 604778 17.93 736866 29 132387 604848 17.96 737235 30 133505 609678 17.96 743183 31 133967 605310 18.12 739277 32 131994 606098 17.88 738092 33 132942 609419 17.91 742361 34 131817 603616 17.92 735433 35 132204 605643 17.92 737847 36 132687 607988 17.91 740675 37 132446 606048 17.93 738494 38 131983 606252 17.88 738235 39 133296 608973 17.96 742269 40 131965 609194 17.81 741159 41 132527 607056 17.92 739583 42 133719 610102 17.98 743821 43 133727 608722 18.01 742449 44 132991 607773 17.95 740764 45 132373 606749 17.91 739122 46 132688 606846 17.94 739534 47 131904 604507 17.91 736411 48 132143 608669 17.84 740812 49 132922 607260 17.96 740182 50 132572 607309 17.92 739881 51 133079 609554 17.92 742633 52 133674 610065 17.97 743739 53 133478 604432 18.09 737910 54 133840 607673 18.05 741513 55 132655 603524 18.02 736179 56 133310 605428 18.05 738738 57 132981 606824 17.98 739805 58 132742 607186 17.94 739928 59 132430 603861 17.99 736291 60 133058 607359 17.97 740417 61 132840 605030 18.00 737870 62 133406 608165 17.99 741571 63 133476 607872 18.00 741348 64 132703 606735 17.95 739438 65 133164 605309 18.03 738473 66 133175 606292 18.01 739467 67 133011 601629 18.11 734640 68 132521 606334 17.94 738855 69 132819 605298 17.99 738117 70 133617 605016 18.09 738633 71 134005 603332 18.17 737337 72 134285 607698 18.10 741983 73 133967 604933 18.13 738900 74 133041 606614 17.99 739655 75 133389 604796 18.07 738185 76 132869 603990 18.03 736859 77 131667 600880 17.97 732547 78 133396 602305 18.13 735701 79 132978 603184 18.06 736162 80 133559 612132 17.91 745691 81 132879 604103 18.03 736982 82 132668 602560 18.04 735228 83 133058 604393 18.04 737451 84 133494 607859 18.01 741353 85 133058 605147 18.02 738205 86 131871 604009 17.92 735880 87 132501 604654 17.97 737155 88 132064 603954 17.94 736018 89 133397 601014 18.16 734411 90 132971 607668 17.95 740639 91 133100 602979 18.08 736079 92 133045 608118 17.95 741163 93 134189 607567 18.09 741756 94 132908 606035 17.99 738943 95 133828 602427 18.18 736255 96 133681 606969 18.05 740650 97 133120 599350 18.17 732470 98 132951 605702 18.00 738653 99 133418 603699 18.10 737117 100 134080 605004 18.14 739084 101 133855 604711 18.12 738566 102 134090 607211 18.09 741301 103 133321 601338 18.15 734659 104 134358 603416 18.21 737774 105 133995 603179 18.18 737174 106 132853 602161 18.07 735014 107 133310 600525 18.17 733835 108 133915 605459 18.11 739374 109 133895 600104 18.24 733999 110 133808 601895 18.19 735703 111 133327 601470 18.14 734797 112 132851 602127 18.08 734978 113 133724 599529 18.24 733253 114 133946 601525 18.21 735471 115 134434 596459 18.39 730893 116 133787 597808 18.29 731595 117 134232 599232 18.30 733464 118 133794 597518 18.30 731312 119 133434 595455 18.31 728889 120 134712 598584 18.37 733296 121 132732 593524 18.28 726256 122 133188 593971 18.32 727159 123 134314 596598 18.38 730912 124 134015 593849 18.41 727864 125 133281 594083 18.32 727364 126 134433 591657 18.51 726090 127 133912 589981 18.50 723893 128 135025 589674 18.63 724699 129 135311 590437 18.64 725748 130 133801 587535 18.55 721336 131 135280 587874 18.71 723154 132 135197 590242 18.64 725439 133 134830 582897 18.79 717727 134 134892 582251 18.81 717143 135 135195 583736 18.81 718931 136 136017 582819 18.92 718836 137 136340 580127 19.03 716467 138 136797 581527 19.04 718324 139 135983 577371 19.06 713354 140 136012 576809 19.08 712821 141 137564 574222 19.33 711786 142 137706 571577 19.41 709283 143 137405 571884 19.37 709289 144 139832 574743 19.57 714575 145 141948 573489 19.84 715437 146 146682 575113 20.32 721795 147 149436 577733 20.55 727169 148 150312 576582 20.68 726894 149 150960 573927 20.83 724887 150 157947 586634 21.21 744581 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 11893 1482916 0.80 1494809 2 13217 1075453 1.21 1088670 3 10274 865055 1.17 875329 4 9892 1126700 0.87 1136592 5 11746 1235011 0.94 1246757 6 12126 1200510 1.00 1212636 7 11050 1055629 1.04 1066679 8 10515 1067507 0.98 1078022 9 10365 1078862 0.95 1089227 10 10252 1071420 0.95 1081672 11 10423 1099990 0.94 1110413 12 10338 1089247 0.94 1099585 13 10134 1076836 0.93 1086970 14 10278 1088130 0.94 1098408 15 10293 1088832 0.94 1099125 16 10558 1090522 0.96 1101080 17 10695 1098015 0.96 1108710 18 10682 1102873 0.96 1113555 19 10865 1093635 0.98 1104500 20 10908 1096548 0.98 1107456 21 11048 1107813 0.99 1118861 22 10925 1106911 0.98 1117836 23 10821 1107565 0.97 1118386 24 11069 1103664 0.99 1114733 25 10882 1095932 0.98 1106814 26 11792 1109348 1.05 1121140 27 11652 1110724 1.04 1122376 28 12276 1111054 1.09 1123330 29 11497 1109801 1.03 1121298 30 11864 1115745 1.05 1127609 31 11883 1121122 1.05 1133005 32 11780 1120116 1.04 1131896 33 11943 1117453 1.06 1129396 34 11665 1113861 1.04 1125526 35 11859 1113335 1.05 1125194 36 11857 1119219 1.05 1131076 37 11836 1112306 1.05 1124142 38 11705 1115107 1.04 1126812 39 11838 1115241 1.05 1127079 40 11713 1116299 1.04 1128012 41 11772 1112108 1.05 1123880 42 12110 1119523 1.07 1131633 43 11946 1114001 1.06 1125947 44 11913 1121149 1.05 1133062 45 12050 1118750 1.07 1130800 46 11929 1112100 1.06 1124029 47 11944 1110739 1.06 1122683 48 12027 1119591 1.06 1131618 49 11899 1113938 1.06 1125837 50 11726 1116893 1.04 1128619 51 11721 1115822 1.04 1127543 52 11821 1118466 1.05 1130287 53 11927 1113354 1.06 1125281 54 12092 1127534 1.06 1139626 55 11770 1117455 1.04 1129225 56 13133 1117852 1.16 1130985 57 11942 1115720 1.06 1127662 58 12260 1112098 1.09 1124358 59 12028 1113486 1.07 1125514 60 11994 1121061 1.06 1133055 61 12049 1118878 1.07 1130927 62 12138 1119407 1.07 1131545 63 12067 1116717 1.07 1128784 64 11924 1117458 1.06 1129382 65 12058 1115354 1.07 1127412 66 12367 1118691 1.09 1131058 67 12156 1110827 1.08 1122983 68 12222 1121160 1.08 1133382 69 11941 1117202 1.06 1129143 70 12277 1114196 1.09 1126473 71 12150 1109632 1.08 1121782 72 12217 1119167 1.08 1131384 73 12207 1115052 1.08 1127259 74 12276 1122230 1.08 1134506 75 12987 1112494 1.15 1125481 76 11883 1112948 1.06 1124831 77 11847 1109383 1.06 1121230 78 12645 1114755 1.12 1127400 79 12141 1110413 1.08 1122554 80 12054 1118495 1.07 1130549 81 12144 1116142 1.08 1128286 82 12206 1112023 1.09 1124229 83 12140 1114671 1.08 1126811 84 12235 1119089 1.08 1131324 85 12034 1112101 1.07 1124135 86 12057 1114877 1.07 1126934 87 12443 1113772 1.10 1126215 88 12441 1114645 1.10 1127086 89 12519 1112337 1.11 1124856 90 12450 1116652 1.10 1129102 91 12452 1115200 1.10 1127652 92 12684 1116641 1.12 1129325 93 12646 1112863 1.12 1125509 94 12536 1113319 1.11 1125855 95 12755 1110635 1.14 1123390 96 12905 1117523 1.14 1130428 97 12715 1109083 1.13 1121798 98 13101 1110465 1.17 1123566 99 13020 1111655 1.16 1124675 100 13000 1110164 1.16 1123164 101 13161 1106689 1.18 1119850 102 13338 1110420 1.19 1123758 103 13248 1105044 1.18 1118292 104 13646 1105848 1.22 1119494 105 13657 1106669 1.22 1120326 106 13722 1106286 1.23 1120008 107 13769 1106707 1.23 1120476 108 13931 1114176 1.23 1128107 109 13868 1101525 1.24 1115393 110 14285 1103365 1.28 1117650 111 14480 1107544 1.29 1122024 112 14582 1104743 1.30 1119325 113 14840 1101812 1.33 1116652 114 15120 1100891 1.35 1116011 115 15389 1096061 1.38 1111450 116 15299 1099193 1.37 1114492 117 15686 1100415 1.41 1116101 118 15906 1094541 1.43 1110447 119 16187 1095547 1.46 1111734 120 16532 1100374 1.48 1116906 121 16722 1090152 1.51 1106874 122 17356 1089884 1.57 1107240 123 17241 1087545 1.56 1104786 124 17615 1091521 1.59 1109136 125 18049 1090483 1.63 1108532 126 18712 1091082 1.69 1109794 127 18858 1083703 1.71 1102561 128 19292 1086307 1.74 1105599 129 19791 1080172 1.80 1099963 130 20755 1078886 1.89 1099641 131 20702 1072774 1.89 1093476 132 21663 1079607 1.97 1101270 133 21691 1070419 1.99 1092110 134 22663 1069898 2.07 1092561 135 23102 1068252 2.12 1091354 136 23372 1068915 2.14 1092287 137 23991 1057965 2.22 1081956 138 24592 1057766 2.27 1082358 139 26067 1052912 2.42 1078979 140 26716 1054087 2.47 1080803 141 28202 1050908 2.61 1079110 142 28382 1048865 2.63 1077247 143 29547 1043783 2.75 1073330 144 32938 1048555 3.05 1081493 145 38832 1049528 3.57 1088360 146 46858 1054926 4.25 1101784 147 50736 1054570 4.59 1105306 148 56248 1055654 5.06 1111902 149 66058 1063149 5.85 1129207 150 67796 1057599 6.02 1125395 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 30923 4354542 0.71 4385465 2 53452 3767744 1.40 3821196 3 38531 3169395 1.20 3207926 4 39690 4134109 0.95 4173799 5 43332 4265755 1.01 4309087 6 44629 4342789 1.02 4387418 7 44328 3997317 1.10 4041645 8 42752 4145003 1.02 4187755 9 41351 4315864 0.95 4357215 10 41508 4306045 0.95 4347553 11 41332 4396433 0.93 4437765 12 40834 4365954 0.93 4406788 13 40179 4344814 0.92 4384993 14 40906 4360107 0.93 4401013 15 41584 4332149 0.95 4373733 16 41805 4327242 0.96 4369047 17 42532 4353909 0.97 4396441 18 43191 4389847 0.97 4433038 19 42792 4362373 0.97 4405165 20 43904 4396380 0.99 4440284 21 43472 4401082 0.98 4444554 22 43394 4397527 0.98 4440921 23 43306 4373351 0.98 4416657 24 43483 4384452 0.98 4427935 25 44034 4380295 1.00 4424329 26 45246 4366133 1.03 4411379 27 45544 4375893 1.03 4421437 28 47320 4370664 1.07 4417984 29 45012 4379190 1.02 4424202 30 45883 4403343 1.03 4449226 31 45750 4384811 1.03 4430561 32 45797 4379521 1.03 4425318 33 46420 4383393 1.05 4429813 34 45562 4373123 1.03 4418685 35 45699 4371842 1.03 4417541 36 45759 4388958 1.03 4434717 37 45356 4371076 1.03 4416432 38 45837 4387071 1.03 4432908 39 46169 4396450 1.04 4442619 40 46024 4386459 1.04 4432483 41 46166 4388214 1.04 4434380 42 46075 4405876 1.03 4451951 43 46035 4382650 1.04 4428685 44 45970 4388602 1.04 4434572 45 45911 4383834 1.04 4429745 46 45994 4381720 1.04 4427714 47 45606 4381714 1.03 4427320 48 46463 4388452 1.05 4434915 49 45872 4370680 1.04 4416552 50 45913 4377506 1.04 4423419 51 46031 4383402 1.04 4429433 52 46486 4380255 1.05 4426741 53 46427 4374272 1.05 4420699 54 46560 4397145 1.05 4443705 55 45982 4371974 1.04 4417956 56 50456 4376171 1.14 4426627 57 46268 4385088 1.04 4431356 58 46436 4380337 1.05 4426773 59 46791 4386232 1.06 4433023 60 46660 4411147 1.05 4457807 61 46451 4379099 1.05 4425550 62 46728 4389095 1.05 4435823 63 46678 4389889 1.05 4436567 64 46514 4386181 1.05 4432695 65 47075 4375391 1.06 4422466 66 47089 4385929 1.06 4433018 67 46797 4372335 1.06 4419132 68 46870 4386498 1.06 4433368 69 46786 4379424 1.06 4426210 70 46287 4377002 1.05 4423289 71 47186 4385604 1.06 4432790 72 47085 4394553 1.06 4441638 73 46825 4383515 1.06 4430340 74 47589 4392021 1.07 4439610 75 49710 4378915 1.12 4428625 76 47294 4385373 1.07 4432667 77 46510 4379253 1.05 4425763 78 49254 4394956 1.11 4444210 79 47269 4379614 1.07 4426883 80 47482 4396185 1.07 4443667 81 46959 4392087 1.06 4439046 82 47309 4390124 1.07 4437433 83 47335 4377388 1.07 4424723 84 47543 4396670 1.07 4444213 85 47757 4374105 1.08 4421862 86 47887 4377465 1.08 4425352 87 48082 4372178 1.09 4420260 88 48646 4380776 1.10 4429422 89 48441 4371980 1.10 4420421 90 48973 4392698 1.10 4441671 91 48802 4373384 1.10 4422186 92 49005 4373025 1.11 4422030 93 49067 4381116 1.11 4430183 94 49000 4371650 1.11 4420650 95 50060 4362032 1.13 4412092 96 50451 4385291 1.14 4435742 97 50221 4360982 1.14 4411203 98 50431 4374053 1.14 4424484 99 51262 4371487 1.16 4422749 100 51273 4369936 1.16 4421209 101 52172 4353946 1.18 4406118 102 52741 4371157 1.19 4423898 103 52456 4352391 1.19 4404847 104 54346 4362842 1.23 4417188 105 54015 4373544 1.22 4427559 106 54031 4362977 1.22 4417008 107 54760 4348303 1.24 4403063 108 55667 4368928 1.26 4424595 109 56358 4340553 1.28 4396911 110 57481 4348451 1.30 4405932 111 57494 4344309 1.31 4401803 112 58805 4346250 1.33 4405055 113 59398 4328876 1.35 4388274 114 60761 4335413 1.38 4396174 115 61387 4321305 1.40 4382692 116 62829 4331693 1.43 4394522 117 63688 4331809 1.45 4395497 118 64630 4318507 1.47 4383137 119 65968 4309132 1.51 4375100 120 67601 4331530 1.54 4399131 121 69207 4298244 1.58 4367451 122 71094 4293230 1.63 4364324 123 72113 4297410 1.65 4369523 124 73943 4299081 1.69 4373024 125 75151 4291888 1.72 4367039 126 77952 4293496 1.78 4371448 127 79149 4270054 1.82 4349203 128 81652 4265986 1.88 4347638 129 83434 4262037 1.92 4345471 130 86848 4252239 2.00 4339087 131 87688 4241685 2.03 4329373 132 91557 4251298 2.11 4342855 133 92599 4217217 2.15 4309816 134 96049 4222446 2.22 4318495 135 99023 4221952 2.29 4320975 136 101787 4205214 2.36 4307001 137 104247 4188766 2.43 4293013 138 108523 4186077 2.53 4294600 139 111852 4164872 2.62 4276724 140 116949 4166450 2.73 4283399 141 121008 4152967 2.83 4273975 142 124489 4133550 2.92 4258039 143 131119 4127211 3.08 4258330 144 140565 4142079 3.28 4282644 145 160353 4141759 3.73 4302112 146 180741 4153661 4.17 4334402 147 203485 4175986 4.65 4379471 148 217146 4159570 4.96 4376716 149 229297 4143032 5.24 4372329 150 236730 4142284 5.41 4379014 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1340692 258373 83.84 1599065 2 427806 91593 82.37 519399 3 360803 135035 72.77 495838 4 433656 221810 66.16 655466 5 320549 263862 54.85 584411 6 266804 300489 47.03 567293 7 221234 370856 37.36 592090 8 201328 436063 31.59 637391 9 186511 484848 27.78 671359 10 167969 513499 24.65 681468 11 151178 534758 22.04 685936 12 141469 533233 20.97 674702 13 132138 523669 20.15 655807 14 124535 521251 19.28 645786 15 119096 515504 18.77 634600 16 115813 509406 18.52 625219 17 114816 502518 18.60 617334 18 113566 499482 18.52 613048 19 113077 495346 18.59 608423 20 112850 492371 18.65 605221 21 113066 489631 18.76 602697 22 111741 487856 18.64 599597 23 113286 485596 18.92 598882 24 111185 483881 18.68 595066 25 110692 482633 18.66 593325 26 111099 481772 18.74 592871 27 110207 480649 18.65 590856 28 109638 479279 18.62 588917 29 110160 476843 18.77 587003 30 109189 476626 18.64 585815 31 108527 473143 18.66 581670 32 108693 471383 18.74 580076 33 108225 469579 18.73 577804 34 106481 465992 18.60 572473 35 105798 464047 18.57 569845 36 105486 460030 18.65 565516 37 104403 457827 18.57 562230 38 104344 457003 18.59 561347 39 103189 453456 18.54 556645 40 102350 451224 18.49 553574 41 101877 447789 18.53 549666 42 100944 446119 18.45 547063 43 100545 443749 18.47 544294 44 99319 440203 18.41 539522 45 98879 436379 18.47 535258 46 98926 433406 18.58 532332 47 98412 431847 18.56 530259 48 97113 428154 18.49 525267 49 96295 423869 18.51 520164 50 95487 421873 18.46 517360 51 94977 419364 18.47 514341 52 93521 415457 18.37 508978 53 94293 413375 18.57 507668 54 93447 411386 18.51 504833 55 92746 407489 18.54 500235 56 91798 403152 18.55 494950 57 91405 400687 18.57 492092 58 90994 396712 18.66 487706 59 90081 394884 18.57 484965 60 88673 392019 18.45 480692 61 88442 388715 18.54 477157 62 87776 386744 18.50 474520 63 87298 383642 18.54 470940 64 86013 380266 18.45 466279 65 85797 376618 18.55 462415 66 84792 372643 18.54 457435 67 84157 370460 18.51 454617 68 83687 365872 18.62 449559 69 82855 364784 18.51 447639 70 82261 361464 18.54 443725 71 82340 358173 18.69 440513 72 81015 355396 18.56 436411 73 80691 353135 18.60 433826 74 80184 349219 18.67 429403 75 79157 346114 18.61 425271 76 79067 345046 18.64 424113 77 77758 340949 18.57 418707 78 77223 337742 18.61 414965 79 76662 334780 18.63 411442 80 76218 333651 18.60 409869 81 75003 330670 18.49 405673 82 75205 326346 18.73 401551 83 74234 324148 18.63 398382 84 73655 322088 18.61 395743 85 72852 319201 18.58 392053 86 72114 315804 18.59 387918 87 71681 313257 18.62 384938 88 71151 309560 18.69 380711 89 70136 308107 18.54 378243 90 69591 304804 18.59 374395 91 69318 302345 18.65 371663 92 68401 300510 18.54 368911 93 67809 297376 18.57 365185 94 67545 294488 18.66 362033 95 66932 292666 18.61 359598 96 66279 288595 18.68 354874 97 65688 285467 18.71 351155 98 65494 283804 18.75 349298 99 64971 280246 18.82 345217 100 63431 279478 18.50 342909 101 63187 277043 18.57 340230 102 63160 273963 18.74 337123 103 62365 271624 18.67 333989 104 62160 269657 18.73 331817 105 61278 266516 18.69 327794 106 61074 263445 18.82 324519 107 60109 262364 18.64 322473 108 59912 260292 18.71 320204 109 59227 256892 18.74 316119 110 58725 255269 18.70 313994 111 58655 252641 18.84 311296 112 57555 250667 18.67 308222 113 57095 248535 18.68 305630 114 56702 245086 18.79 301788 115 55732 243207 18.64 298939 116 55702 241435 18.75 297137 117 54979 238782 18.72 293761 118 54677 236060 18.81 290737 119 53843 233324 18.75 287167 120 53227 231560 18.69 284787 121 52546 229544 18.63 282090 122 52130 227963 18.61 280093 123 51772 224924 18.71 276696 124 51110 222675 18.67 273785 125 51139 221740 18.74 272879 126 50244 218255 18.71 268499 127 49858 217306 18.66 267164 128 49294 214559 18.68 263853 129 49188 213461 18.73 262649 130 48052 210742 18.57 258794 131 47660 208419 18.61 256079 132 47452 206839 18.66 254291 133 47080 205209 18.66 252289 134 46695 202584 18.73 249279 135 45828 200873 18.58 246701 136 45558 199095 18.62 244653 137 45025 196889 18.61 241914 138 44714 193924 18.74 238638 139 44360 192912 18.70 237272 140 44120 190261 18.82 234381 141 43641 188412 18.81 232053 142 43168 187418 18.72 230586 143 42461 184789 18.68 227250 144 42048 182699 18.71 224747 145 42042 182068 18.76 224110 146 41393 178917 18.79 220310 147 41225 178181 18.79 219406 148 41028 177784 18.75 218812 149 40365 177042 18.57 217407 150 39857 174853 18.56 214710 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1797961 345899 83.87 2143860 2 1598535 375982 80.96 1974517 3 442026 156748 73.82 598774 4 489599 258326 65.46 747925 5 446240 406701 52.32 852941 6 322487 426925 43.03 749412 7 256544 479375 34.86 735919 8 184820 576616 24.27 761436 9 139864 682886 17.00 822750 10 103391 779817 11.71 883208 11 75713 860446 8.09 936159 12 53277 885730 5.67 939007 13 38820 892776 4.17 931596 14 27575 896999 2.98 924574 15 20972 902042 2.27 923014 16 16503 900954 1.80 917457 17 14305 895750 1.57 910055 18 12403 890047 1.37 902450 19 11231 884605 1.25 895836 20 10987 880532 1.23 891519 21 10438 878960 1.17 889398 22 10341 873196 1.17 883537 23 10171 868578 1.16 878749 24 9830 866047 1.12 875877 25 9433 864780 1.08 874213 26 9460 860675 1.09 870135 27 9308 857516 1.07 866824 28 10327 855128 1.19 865455 29 9723 853813 1.13 863536 30 9001 848925 1.05 857926 31 9316 842119 1.09 851435 32 9095 840652 1.07 849747 33 9222 833889 1.09 843111 34 8875 830658 1.06 839533 35 8744 827369 1.05 836113 36 8999 823279 1.08 832278 37 9004 819399 1.09 828403 38 8734 814501 1.06 823235 39 8771 810199 1.07 818970 40 8453 806121 1.04 814574 41 8508 802385 1.05 810893 42 8533 795507 1.06 804040 43 8345 792229 1.04 800574 44 8387 786620 1.05 795007 45 8298 781618 1.05 789916 46 8417 776641 1.07 785058 47 8006 771163 1.03 779169 48 8100 769168 1.04 777268 49 8034 761358 1.04 769392 50 8005 755540 1.05 763545 51 7799 751907 1.03 759706 52 8016 744376 1.07 752392 53 8021 741019 1.07 749040 54 7984 736560 1.07 744544 55 8045 730355 1.09 738400 56 8066 725408 1.10 733474 57 7880 719364 1.08 727244 58 7910 713019 1.10 720929 59 7909 708475 1.10 716384 60 7750 703479 1.09 711229 61 7935 696982 1.13 704917 62 7718 691867 1.10 699585 63 7610 688573 1.09 696183 64 7294 681348 1.06 688642 65 7425 675609 1.09 683034 66 7399 670312 1.09 677711 67 7274 665865 1.08 673139 68 7456 659710 1.12 667166 69 7288 654140 1.10 661428 70 7492 648987 1.14 656479 71 7361 643541 1.13 650902 72 7374 640161 1.14 647535 73 7326 633865 1.14 641191 74 7184 630415 1.13 637599 75 7238 624550 1.15 631788 76 6948 617116 1.11 624064 77 7151 614259 1.15 621410 78 7170 608054 1.17 615224 79 7369 602649 1.21 610018 80 7107 599370 1.17 606477 81 6976 592281 1.16 599257 82 6981 587310 1.17 594291 83 7170 584082 1.21 591252 84 6944 577004 1.19 583948 85 6861 572633 1.18 579494 86 7060 565843 1.23 572903 87 6974 561978 1.23 568952 88 7395 555256 1.31 562651 89 6829 553205 1.22 560034 90 6868 546479 1.24 553347 91 6860 543074 1.25 549934 92 6721 536448 1.24 543169 93 6925 533589 1.28 540514 94 7042 528416 1.32 535458 95 6666 523529 1.26 530195 96 6741 518972 1.28 525713 97 6507 515924 1.25 522431 98 6828 510911 1.32 517739 99 6627 506183 1.29 512810 100 6700 500451 1.32 507151 101 6597 496515 1.31 503112 102 6574 492199 1.32 498773 103 6439 489737 1.30 496176 104 6623 482623 1.35 489246 105 6819 478097 1.41 484916 106 6527 474651 1.36 481178 107 6539 469223 1.37 475762 108 6556 466046 1.39 472602 109 6586 461449 1.41 468035 110 6354 457721 1.37 464075 111 6412 453472 1.39 459884 112 6117 449365 1.34 455482 113 6349 445492 1.41 451841 114 6376 440082 1.43 446458 115 6481 435970 1.46 442451 116 6215 432790 1.42 439005 117 6264 427878 1.44 434142 118 6077 423903 1.41 429980 119 6055 420689 1.42 426744 120 6249 415350 1.48 421599 121 6078 411830 1.45 417908 122 6055 410231 1.45 416286 123 5960 404761 1.45 410721 124 6006 400158 1.48 406164 125 5846 396169 1.45 402015 126 5904 394502 1.47 400406 127 6098 389321 1.54 395419 128 5657 385885 1.44 391542 129 5826 381987 1.50 387813 130 5774 378269 1.50 384043 131 5669 374137 1.49 379806 132 5755 370491 1.53 376246 133 5608 366288 1.51 371896 134 5757 363318 1.56 369075 135 5742 358839 1.57 364581 136 5404 355610 1.50 361014 137 5503 352611 1.54 358114 138 5575 347868 1.58 353443 139 5641 346257 1.60 351898 140 5537 342111 1.59 347648 141 5603 338375 1.63 343978 142 5471 334084 1.61 339555 143 5540 330638 1.65 336178 144 5506 327670 1.65 333176 145 5248 324528 1.59 329776 146 5475 321729 1.67 327204 147 5578 317280 1.73 322858 148 5698 315321 1.77 321019 149 5721 314445 1.79 320166 150 5784 311491 1.82 317275 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4830894 923656 83.95 5754550 2 4097489 948355 81.21 5045844 3 3780019 1528794 71.20 5308813 4 3240657 1819527 64.04 5060184 5 2352469 2197758 51.70 4550227 6 1855418 2425105 43.35 4280523 7 1420371 2560877 35.68 3981248 8 1071204 2663267 28.68 3734471 9 789163 2777194 22.13 3566357 10 569671 2896272 16.44 3465943 11 401046 3134085 11.34 3535131 12 277031 3250974 7.85 3528005 13 193846 3322820 5.51 3516666 14 133446 3397874 3.78 3531320 15 99269 3461169 2.79 3560438 16 74257 3513426 2.07 3587683 17 61134 3551385 1.69 3612519 18 53039 3568562 1.46 3621601 19 47210 3579448 1.30 3626658 20 45302 3572068 1.25 3617370 21 42640 3565890 1.18 3608530 22 42697 3547760 1.19 3590457 23 40964 3535125 1.15 3576089 24 40981 3515400 1.15 3556381 25 39599 3504503 1.12 3544102 26 39433 3485267 1.12 3524700 27 38936 3471136 1.11 3510072 28 39853 3455143 1.14 3494996 29 40535 3440885 1.16 3481420 30 39071 3429147 1.13 3468218 31 38789 3402641 1.13 3441430 32 37616 3390209 1.10 3427825 33 37846 3360755 1.11 3398601 34 36771 3346203 1.09 3382974 35 36340 3323775 1.08 3360115 36 36806 3307248 1.10 3344054 37 36175 3285074 1.09 3321249 38 36259 3271204 1.10 3307463 39 35887 3252878 1.09 3288765 40 34618 3236836 1.06 3271454 41 34665 3214522 1.07 3249187 42 34321 3193439 1.06 3227760 43 33559 3169917 1.05 3203476 44 33376 3146944 1.05 3180320 45 33466 3125907 1.06 3159373 46 33998 3103326 1.08 3137324 47 33018 3087530 1.06 3120548 48 32706 3068301 1.05 3101007 49 33263 3048982 1.08 3082245 50 33120 3024222 1.08 3057342 51 31967 3004725 1.05 3036692 52 32203 2980337 1.07 3012540 53 32506 2956060 1.09 2988566 54 31916 2933975 1.08 2965891 55 32383 2911041 1.10 2943424 56 32258 2890292 1.10 2922550 57 31994 2872085 1.10 2904079 58 31428 2851030 1.09 2882458 59 31449 2834315 1.10 2865764 60 30989 2810106 1.09 2841095 61 32162 2787214 1.14 2819376 62 31370 2769558 1.12 2800928 63 30452 2749237 1.10 2779689 64 30259 2725821 1.10 2756080 65 30157 2704554 1.10 2734711 66 30129 2684136 1.11 2714265 67 29874 2663443 1.11 2693317 68 30663 2641863 1.15 2672526 69 29509 2621536 1.11 2651045 70 29639 2599733 1.13 2629372 71 29753 2576637 1.14 2606390 72 29871 2556284 1.16 2586155 73 28918 2536842 1.13 2565760 74 28705 2522107 1.13 2550812 75 29040 2495811 1.15 2524851 76 28853 2479795 1.15 2508648 77 29149 2456652 1.17 2485801 78 29259 2437708 1.19 2466967 79 29313 2417443 1.20 2446756 80 28473 2401663 1.17 2430136 81 28115 2380834 1.17 2408949 82 28723 2360132 1.20 2388855 83 28709 2338925 1.21 2367634 84 28020 2322616 1.19 2350636 85 28101 2302130 1.21 2330231 86 28020 2281446 1.21 2309466 87 27917 2260749 1.22 2288666 88 29427 2237095 1.30 2266522 89 27468 2220942 1.22 2248410 90 27468 2200946 1.23 2228414 91 27416 2184846 1.24 2212262 92 27036 2167348 1.23 2194384 93 26766 2146053 1.23 2172819 94 27487 2123420 1.28 2150907 95 27154 2107274 1.27 2134428 96 26910 2088268 1.27 2115178 97 25561 2068256 1.22 2093817 98 26439 2050811 1.27 2077250 99 26316 2035107 1.28 2061423 100 26816 2015096 1.31 2041912 101 25966 1999936 1.28 2025902 102 26064 1981332 1.30 2007396 103 25089 1964171 1.26 1989260 104 26230 1944995 1.33 1971225 105 26750 1924303 1.37 1951053 106 25699 1908590 1.33 1934289 107 26201 1886924 1.37 1913125 108 25606 1874421 1.35 1900027 109 25838 1854647 1.37 1880485 110 24830 1842068 1.33 1866898 111 25386 1827661 1.37 1853047 112 24352 1811554 1.33 1835906 113 25014 1792608 1.38 1817622 114 25341 1771620 1.41 1796961 115 25360 1758587 1.42 1783947 116 24344 1742454 1.38 1766798 117 24312 1726397 1.39 1750709 118 24098 1710630 1.39 1734728 119 24112 1694146 1.40 1718258 120 24096 1676265 1.42 1700361 121 23753 1659437 1.41 1683190 122 23810 1645288 1.43 1669098 123 23226 1631849 1.40 1655075 124 23051 1613507 1.41 1636558 125 23329 1601295 1.44 1624624 126 22316 1583505 1.39 1605821 127 23173 1564780 1.46 1587953 128 22711 1553240 1.44 1575951 129 22557 1539315 1.44 1561872 130 22163 1524469 1.43 1546632 131 22257 1509851 1.45 1532108 132 22324 1494247 1.47 1516571 133 22115 1479191 1.47 1501306 134 22333 1465917 1.50 1488250 135 22222 1451186 1.51 1473408 136 21376 1434665 1.47 1456041 137 21496 1423331 1.49 1444827 138 22247 1404613 1.56 1426860 139 21637 1391117 1.53 1412754 140 21704 1377252 1.55 1398956 141 21850 1361453 1.58 1383303 142 21726 1346657 1.59 1368383 143 21676 1332284 1.60 1353960 144 21361 1321618 1.59 1342979 145 20548 1309302 1.55 1329850 146 20824 1296473 1.58 1317297 147 22266 1280892 1.71 1303158 148 21919 1274353 1.69 1296272 149 22437 1267873 1.74 1290310 150 22506 1256309 1.76 1278815