Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181101/EPI-42_S39_L005_R1_001_val_1_bismark_bt2_pe.bam: 16878077 Total number duplicated alignments removed: 5949512 (35.25%) Duplicated alignments were found at: 3317643 different position(s) Total count of deduplicated leftover sequences: 10928565 (64.75% of total)