EPI-42_S39_L005_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: paired-end (SAM format)
Output specified: strand-specific (default)
No overlapping methylation calls specified


Processed 10928565 lines in total
Total number of methylation call strings processed: 21857130

Final Cytosine Methylation Report
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Total number of C's analysed:	230149373

Total methylated C's in CpG context:	9797001
Total methylated C's in CHG context:	1331538
Total methylated C's in CHH context:	5440340

Total C to T conversions in CpG context:	21851850
Total C to T conversions in CHG context:	48404322
Total C to T conversions in CHH context:	143324322

C methylated in CpG context:	31.0%
C methylated in CHG context:	2.7%
C methylated in CHH context:	3.7%