Total number of alignments analysed in /gscratch/srlab/strigg/analyses/20181101/EPI-41_S38_L005_R1_001_val_1_bismark_bt2_pe.bam:	13451347
Total number duplicated alignments removed:	5031715 (37.41%)
Duplicated alignments were found at:	2720422 different position(s)

Total count of deduplicated leftover sequences: 8419632 (62.59% of total)