EPI-206_S27_L004_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 8487989 lines in total Total number of methylation call strings processed: 16975978 Final Cytosine Methylation Report ================================= Total number of C's analysed: 179909756 Total methylated C's in CpG context: 6840587 Total methylated C's in CHG context: 1043615 Total methylated C's in CHH context: 4576293 Total C to T conversions in CpG context: 18905942 Total C to T conversions in CHG context: 38214194 Total C to T conversions in CHH context: 110329125 C methylated in CpG context: 26.6% C methylated in CHG context: 2.7% C methylated in CHH context: 4.0%